RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 PRKD2Q9BZL6 878 aa19.34■□□□□ 0.69
SNRPA1-202ENST00000394082 GPRC5CQ9NQ84 441 aa19.34■□□□□ 0.69
SNRPA1-202ENST00000394082 PARP2Q9UGN5 583 aa19.34■□□□□ 0.69
SNRPA1-202ENST00000394082 ZFP37Q9Y6Q3 630 aaPredicted RBP19.34■□□□□ 0.69
SNRPA1-202ENST00000394082 ACKR2O00590 384 aa19.33■□□□□ 0.68
SNRPA1-202ENST00000394082 MED24O75448 989 aa19.33■□□□□ 0.68
SNRPA1-202ENST00000394082 CYP11B2P19099 503 aa19.33■□□□□ 0.68
SNRPA1-202ENST00000394082 MCM7P33993 719 aa19.33■□□□□ 0.68
SNRPA1-202ENST00000394082 NAMPTP43490 491 aa19.33■□□□□ 0.68
SNRPA1-202ENST00000394082 ELAVL2Q12926 359 aaKnown RBP19.33■□□□□ 0.68
SNRPA1-202ENST00000394082 PPP2R5AQ15172 486 aa19.33■□□□□ 0.68
SNRPA1-202ENST00000394082 ERICH6BQ5W0A0 696 aa19.33■□□□□ 0.68
SNRPA1-202ENST00000394082 PDXDC1Q6P996 788 aa19.33■□□□□ 0.68
SNRPA1-202ENST00000394082 RIN2Q8WYP3 895 aaPredicted RBP19.33■□□□□ 0.68
SNRPA1-202ENST00000394082 LLPHQ9BRT6 129 aaKnown RBP19.33■□□□□ 0.68
SNRPA1-202ENST00000394082 FOXP1Q9H334 677 aaPredicted RBP19.33■□□□□ 0.68
SNRPA1-202ENST00000394082 PDZD7Q9H5P4 517 aa19.33■□□□□ 0.68
SNRPA1-202ENST00000394082 ZMYND10O75800 440 aa19.32■□□□□ 0.68
SNRPA1-202ENST00000394082 THP07101 528 aa19.32■□□□□ 0.68
SNRPA1-202ENST00000394082 GBP2P32456 591 aaPredicted RBP19.32■□□□□ 0.68
SNRPA1-202ENST00000394082 ST3GAL1Q11201 340 aa19.32■□□□□ 0.68
SNRPA1-202ENST00000394082 PRPF4BQ13523 1007 aaKnown RBP19.32■□□□□ 0.68
SNRPA1-202ENST00000394082 PADI6Q6TGC4 694 aa19.32■□□□□ 0.68
SNRPA1-202ENST00000394082 CDR2LQ86X02 465 aaPredicted RBP19.32■□□□□ 0.68
SNRPA1-202ENST00000394082 PALB2Q86YC2 1186 aa19.32■□□□□ 0.68
SNRPA1-202ENST00000394082 CCDC105Q8IYK2 499 aa19.32■□□□□ 0.68
SNRPA1-202ENST00000394082 SLC44A3Q8N4M1 653 aa19.32■□□□□ 0.68
SNRPA1-202ENST00000394082 PIK3R5Q8WYR1 880 aa19.32■□□□□ 0.68
SNRPA1-202ENST00000394082 ADPGKQ9BRR6 497 aa19.32■□□□□ 0.68
SNRPA1-202ENST00000394082 TTPALQ9BTX7 342 aa19.32■□□□□ 0.68
SNRPA1-202ENST00000394082 CCDC113Q9H0I3 377 aa19.32■□□□□ 0.68
SNRPA1-202ENST00000394082 PPP4R2Q9NY27 417 aa19.32■□□□□ 0.68
SNRPA1-202ENST00000394082 KLK14Q9P0G3 267 aa19.32■□□□□ 0.68
SNRPA1-202ENST00000394082 FBXL21Q9UKT6 434 aa19.32■□□□□ 0.68
SNRPA1-202ENST00000394082 DOCK8Q8NF50 2099 aa19.31■□□□□ 0.68
SNRPA1-202ENST00000394082 ANHXE9PGG2 379 aa19.31■□□□□ 0.68
SNRPA1-202ENST00000394082 PTGESO14684 152 aa19.31■□□□□ 0.68
SNRPA1-202ENST00000394082 HNRNPA1P09651 372 aaKnown RBP eCLIP19.31■□□□□ 0.68
SNRPA1-202ENST00000394082 OR52Z1P0C646 297 aa19.31■□□□□ 0.68
SNRPA1-202ENST00000394082 SRFP11831 508 aa19.31■□□□□ 0.68
SNRPA1-202ENST00000394082 LAMP2P13473 410 aa19.31■□□□□ 0.68
SNRPA1-202ENST00000394082 HOXA9P31269 272 aa19.31■□□□□ 0.68
SNRPA1-202ENST00000394082 TRAPPC10P48553 1259 aa19.31■□□□□ 0.68
SNRPA1-202ENST00000394082 EFNA5P52803 228 aa19.31■□□□□ 0.68
SNRPA1-202ENST00000394082 NAB2Q15742 525 aa19.31■□□□□ 0.68
SNRPA1-202ENST00000394082 HAUS3Q68CZ6 603 aa19.31■□□□□ 0.68
SNRPA1-202ENST00000394082 RTL10Q7L3V2 364 aa19.31■□□□□ 0.68
SNRPA1-202ENST00000394082 MAEAQ7L5Y9 396 aa19.31■□□□□ 0.68
SNRPA1-202ENST00000394082 SIX5Q8N196 739 aa19.31■□□□□ 0.68
SNRPA1-202ENST00000394082 FLCNQ8NFG4 579 aa19.31■□□□□ 0.68
SNRPA1-202ENST00000394082 B3GALT6Q96L58 329 aa19.31■□□□□ 0.68
SNRPA1-202ENST00000394082 MYADMQ96S97 322 aa19.31■□□□□ 0.68
SNRPA1-202ENST00000394082 PIDD1Q9HB75 910 aa19.31■□□□□ 0.68
SNRPA1-202ENST00000394082 FBXW11Q9UKB1 542 aa19.31■□□□□ 0.68
SNRPA1-202ENST00000394082 LIMCH1Q9UPQ0 1083 aa19.31■□□□□ 0.68
SNRPA1-202ENST00000394082 A0A087WWV3 80 aa19.3■□□□□ 0.68
SNRPA1-202ENST00000394082 ARHGEF35A5YM69 484 aa19.3■□□□□ 0.68
SNRPA1-202ENST00000394082 POU2F2P09086 479 aa19.3■□□□□ 0.68
SNRPA1-202ENST00000394082 SPATA31D3P0C874 917 aa19.3■□□□□ 0.68
SNRPA1-202ENST00000394082 RBM25P49756 843 aaKnown RBP19.3■□□□□ 0.68
SNRPA1-202ENST00000394082 DCAF4L1Q3SXM0 396 aa19.3■□□□□ 0.68
SNRPA1-202ENST00000394082 RTP2Q5QGT7 225 aa19.3■□□□□ 0.68
SNRPA1-202ENST00000394082 POTEGQ6S5H5 508 aa19.3■□□□□ 0.68
SNRPA1-202ENST00000394082 SPATA31D4Q6ZUB0 917 aa19.3■□□□□ 0.68
SNRPA1-202ENST00000394082 LNX1Q8TBB1 728 aaPredicted RBP19.3■□□□□ 0.68
SNRPA1-202ENST00000394082 BSNDQ8WZ55 320 aa19.3■□□□□ 0.68
SNRPA1-202ENST00000394082 PAAF1Q9BRP4 392 aa19.3■□□□□ 0.68
SNRPA1-202ENST00000394082 STK24Q9Y6E0 443 aa19.3■□□□□ 0.68
SNRPA1-202ENST00000394082 PRR23AA6NEV1 266 aa19.29■□□□□ 0.68
SNRPA1-202ENST00000394082 TTLL13PA6NNM8 815 aa19.29■□□□□ 0.68
SNRPA1-202ENST00000394082 TMEM189-UBE2V1I3L0A0 370 aa19.29■□□□□ 0.68
SNRPA1-202ENST00000394082 PI15O43692 258 aa19.29■□□□□ 0.68
SNRPA1-202ENST00000394082 RECQL4O94761 1208 aa19.29■□□□□ 0.68
SNRPA1-202ENST00000394082 KIF4AO95239 1232 aa19.29■□□□□ 0.68
SNRPA1-202ENST00000394082 PRKCBP05771 671 aa19.29■□□□□ 0.68
SNRPA1-202ENST00000394082 FXR2P51116 673 aaKnown RBP eCLIP19.29■□□□□ 0.68
SNRPA1-202ENST00000394082 PDIA5Q14554 519 aa19.29■□□□□ 0.68
SNRPA1-202ENST00000394082 FBXO18Q8NFZ0 1043 aa19.29■□□□□ 0.68
SNRPA1-202ENST00000394082 DEPTORQ8TB45 409 aa19.29■□□□□ 0.68
SNRPA1-202ENST00000394082 KIFAP3Q92845 792 aa19.29■□□□□ 0.68
SNRPA1-202ENST00000394082 C8orf76Q96K31 380 aa19.29■□□□□ 0.68
SNRPA1-202ENST00000394082 CLSTN3Q9BQT9 956 aa19.29■□□□□ 0.68
SNRPA1-202ENST00000394082 SLC2A4RGQ9NR83 387 aa19.29■□□□□ 0.68
SNRPA1-202ENST00000394082 SNTG2Q9NY99 539 aa19.29■□□□□ 0.68
SNRPA1-202ENST00000394082 NARSO43776 548 aaKnown RBP19.28■□□□□ 0.68
SNRPA1-202ENST00000394082 HMGN5P82970 282 aaKnown RBP19.28■□□□□ 0.68
SNRPA1-202ENST00000394082 UVSSAQ2YD98 709 aa19.28■□□□□ 0.68
SNRPA1-202ENST00000394082 FAM171A1Q5VUB5 890 aa19.28■□□□□ 0.68
SNRPA1-202ENST00000394082 PHLDB3Q6NSJ2 640 aa19.28■□□□□ 0.68
SNRPA1-202ENST00000394082 ASCL5Q7RTU5 278 aa19.28■□□□□ 0.68
SNRPA1-202ENST00000394082 APBB1IPQ7Z5R6 666 aaPredicted RBP19.28■□□□□ 0.68
SNRPA1-202ENST00000394082 DTWD2Q8NBA8 298 aa19.28■□□□□ 0.68
SNRPA1-202ENST00000394082 RSAD2Q8WXG1 361 aa19.28■□□□□ 0.68
SNRPA1-202ENST00000394082 IFT74Q96LB3 600 aa19.28■□□□□ 0.68
SNRPA1-202ENST00000394082 KRBA1A5PL33 1030 aa19.27■□□□□ 0.68
SNRPA1-202ENST00000394082 CASTOR2A6NHX0 329 aa19.27■□□□□ 0.68
SNRPA1-202ENST00000394082 RPL17P18621 184 aaKnown RBP19.27■□□□□ 0.68
SNRPA1-202ENST00000394082 HTR4Q13639 388 aa19.27■□□□□ 0.68
SNRPA1-202ENST00000394082 PSMD5Q16401 504 aa19.27■□□□□ 0.68
SNRPA1-202ENST00000394082 LIN9Q5TKA1 542 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms