RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 PARVGQ9HBI0 331 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 GDPD2Q9HCC8 539 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 PTPRHQ9HD43 1115 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 CLDND1Q9NY35 253 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 STK17AQ9UEE5 414 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 TNFSF13BQ9Y275 285 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 GIT1Q9Y2X7 761 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 PRRC2BQ5JSZ5 2229 aaKnown RBP8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 CASTOR2A6NHX0 329 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 NRP1O14786 923 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 FSCN2O14926 492 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 INPPL1O15357 1258 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 TBX10O75333 385 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 IDEP14735 1019 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 PROZP22891 400 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 PPM1AP35813 382 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 LTBRP36941 435 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 MATR3P43243 847 aaKnown RBP eCLIP8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 SMTNP53814 917 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 PLCB3Q01970 1234 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 KRT17Q04695 432 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 UBE3AQ05086 875 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 DSC1Q08554 894 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 KCNA1Q09470 495 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 CSPP1Q1MSJ5 1256 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 ZBTB41Q5SVQ8 909 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 LLGL2Q6P1M3 1020 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 SLC39A4Q6P5W5 647 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 MPZL3Q6UWV2 235 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 TAS1R1Q7RTX1 841 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 TMC7Q7Z402 723 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 FAM178BQ8IXR5 827 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 COLGALT2Q8IYK4 626 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 GRAMD1CQ8IYS0 662 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 HACE1Q8IYU2 909 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 VPS52Q8N1B4 723 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 GLIS3Q8NEA6 775 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 VN1R2Q8NFZ6 395 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 HASPINQ8TF76 798 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 DNAJC19Q96DA6 116 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 TMEM169Q96HH4 297 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 ASB2Q96Q27 587 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 RPS6KC1Q96S38 1066 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 NTPCRQ9BSD7 190 aaKnown RBP8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 TCHPQ9BT92 498 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 TLE6Q9H808 572 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 UBN1Q9NPG3 1134 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 LARSQ9P2J5 1176 aaKnown RBP8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 RCOR1Q9UKL0 485 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 CFAP45Q9UL16 551 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 BARX2Q9UMQ3 279 aaPredicted RBP8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 TBX20Q9UMR3 447 aa8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 RBM19Q9Y4C8 960 aaKnown RBP8.41□□□□□ -1.06
HMGB3P1-201ENST00000393368 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 A0A1B0GVL5 298 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 ANKRD63C9JTQ0 380 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 HNRNPDLO14979 420 aaKnown RBP8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 POLR2DO15514 142 aaKnown RBP8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 TOM1L1O75674 476 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 GLP2RO95838 553 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 MYBP10242 640 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 MCF2P10911 925 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 PDIA4P13667 645 aaKnown RBP8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 TNFSF9P41273 254 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 GRM5P41594 1212 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 LIG4P49917 911 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 CASP5P51878 434 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 KRT85P78386 507 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 MRPS5P82675 430 aaKnown RBP8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 SPAG1Q07617 926 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 GRIK3Q13003 919 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 NOLC1Q14978 699 aaKnown RBP eCLIP8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 NAB2Q15742 525 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 TJAP1Q5JTD0 557 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 RESP18Q5W5W9 173 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 ATXN2LQ8WWM7 1075 aaKnown RBP8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 PABPC5Q96DU9 382 aaKnown RBP8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 SPATA32Q96LK8 384 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 ZMAT2Q96NC0 199 aaKnown RBP8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 TMEM175Q9BSA9 504 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 APOL5Q9BWW9 433 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 COL25A1Q9BXS0 654 aaPredicted RBP8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 ZBP1Q9H171 429 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 BLZF1Q9H2G9 400 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 GOLGA2P5Q9HBQ8 144 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 KANSL3Q9P2N6 904 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 PUF60Q9UHX1 559 aaKnown RBP8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 COG5Q9UP83 839 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 LZTS1Q9Y250 596 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 FAN1Q9Y2M0 1017 aa8.4□□□□□ -1.06
HMGB3P1-201ENST00000393368 MUC3AQ02505 3323 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 C2orf71A6NGG8 1288 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 C2CD2LO14523 706 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 KIF4AO95239 1232 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 GCNT3O95395 438 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 CXCL14O95715 111 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 ALDH2P05091 517 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 CXCL8P10145 99 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 IL9P15248 144 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms