RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 PCDHGC5Q9Y5F6 944 aa11.27□□□□□ -0.61
CALD1-203ENST00000393118 PAPPAQ13219 1627 aa11.27□□□□□ -0.61
CALD1-203ENST00000393118 MYBL1P10243 752 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 VCAM1P19320 739 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 POLE2P56282 527 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 DYNLT1P63172 113 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 TAOK1Q7L7X3 1001 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 ZBTB8OSQ8IWT0 167 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 ARHGEF26Q96DR7 871 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 VPS37BQ9H9H4 285 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 RAB20Q9NX57 234 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 IKBKGQ9Y6K9 419 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 NHSL1Q5SYE7 1610 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 CLDN3O15551 220 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 RTN2O75298 545 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 MMEP08473 750 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 FGFR4P22455 802 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 HSD17B3P37058 310 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 ERVK-9P63128 1117 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 ZRSR2Q15696 482 aaKnown RBP11.26□□□□□ -0.61
CALD1-203ENST00000393118 GKAP1Q5VSY0 366 aaPredicted RBP11.26□□□□□ -0.61
CALD1-203ENST00000393118 ANGEL2Q5VTE6 544 aaKnown RBP11.26□□□□□ -0.61
CALD1-203ENST00000393118 ARHGEF19Q8IW93 802 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 LMNTD2Q8IXW0 634 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 GPD1LQ8N335 351 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 CCDC63Q8NA47 563 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 RNF25Q96BH1 459 aaPredicted RBP11.26□□□□□ -0.61
CALD1-203ENST00000393118 ISCUQ9H1K1 167 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 MLXIPLQ9NP71 852 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 HAUS2Q9NVX0 235 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 CLEC11AQ9Y240 323 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 CD2APQ9Y5K6 639 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 FRMPD4Q14CM0 1322 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 KRT15P19012 456 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 NPTX2P47972 431 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 PRKCEQ02156 737 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 STXBP2Q15833 593 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 CCDC38Q502W7 563 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 KIAA1755Q5JYT7 1200 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 SLC47A2Q86VL8 602 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 ZNF513Q8N8E2 541 aaPredicted RBP11.26□□□□□ -0.61
CALD1-203ENST00000393118 TAS1R2Q8TE23 839 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 LENG9Q96B70 501 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 TRIM4Q9C037 500 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 AGO4Q9HCK5 861 aaKnown RBP11.26□□□□□ -0.61
CALD1-203ENST00000393118 KLHL11Q9NVR0 708 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 HACL1Q9UJ83 578 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 MYH10P35580 1976 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 CALCAP01258 141 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 HSPA6P17066 643 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 PPP3CAQ08209 521 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 ZNF280CQ8ND82 737 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.26□□□□□ -0.61
CALD1-203ENST00000393118 PDCD2LQ9BRP1 358 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 RANBP17Q9H2T7 1088 aaKnown RBP11.26□□□□□ -0.61
CALD1-203ENST00000393118 ACAD9Q9H845 621 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 AGO2Q9UKV8 859 aaKnown RBP11.26□□□□□ -0.61
CALD1-203ENST00000393118 TBX20Q9UMR3 447 aa11.26□□□□□ -0.61
CALD1-203ENST00000393118 COL4A1P02462 1669 aa11.25□□□□□ -0.61
CALD1-203ENST00000393118 RASGRF2O14827 1237 aa11.25□□□□□ -0.61
CALD1-203ENST00000393118 PMS2P54278 862 aa11.25□□□□□ -0.61
CALD1-203ENST00000393118 HP1BP3Q5SSJ5 553 aaPredicted RBP11.25□□□□□ -0.61
CALD1-203ENST00000393118 AADACL2Q6P093 401 aa11.25□□□□□ -0.61
CALD1-203ENST00000393118 BTNL9Q6UXG8 535 aa11.25□□□□□ -0.61
CALD1-203ENST00000393118 SULF1Q8IWU6 871 aa11.25□□□□□ -0.61
CALD1-203ENST00000393118 AGBL3Q8NEM8 1001 aa11.25□□□□□ -0.61
CALD1-203ENST00000393118 SGSM3Q96HU1 749 aa11.25□□□□□ -0.61
CALD1-203ENST00000393118 TSC22D3Q99576 134 aa11.25□□□□□ -0.61
CALD1-203ENST00000393118 MOV10L1Q9BXT6 1211 aaKnown RBP11.25□□□□□ -0.61
CALD1-203ENST00000393118 RBAKQ9NYW8 714 aaPredicted RBP11.25□□□□□ -0.61
CALD1-203ENST00000393118 PIK3CDO00329 1044 aa11.25□□□□□ -0.61
CALD1-203ENST00000393118 EIF3HO15372 352 aaKnown RBP eCLIP11.25□□□□□ -0.61
CALD1-203ENST00000393118 RFX1P22670 979 aa11.25□□□□□ -0.61
CALD1-203ENST00000393118 PHLDB3Q6NSJ2 640 aa11.25□□□□□ -0.61
CALD1-203ENST00000393118 TBC1D1Q86TI0 1168 aaPredicted RBP11.25□□□□□ -0.61
CALD1-203ENST00000393118 C18orf8Q96DM3 657 aa11.25□□□□□ -0.61
CALD1-203ENST00000393118 ZNF302Q9NR11 478 aa11.25□□□□□ -0.61
CALD1-203ENST00000393118 STRCQ7RTU9 1775 aa11.25□□□□□ -0.61
CALD1-203ENST00000393118 AHDC1Q5TGY3 1603 aaPredicted RBP11.25□□□□□ -0.61
CALD1-203ENST00000393118 GTPBP10A4D1E9 387 aaKnown RBP11.25□□□□□ -0.61
CALD1-203ENST00000393118 POC1B-GALNT4F8VUJ3 575 aa11.25□□□□□ -0.61
CALD1-203ENST00000393118 ATP9AO75110 1047 aa11.25□□□□□ -0.61
CALD1-203ENST00000393118 ANXA13P27216 316 aa11.25□□□□□ -0.61
CALD1-203ENST00000393118 JAMLQ86YT9 394 aa11.25□□□□□ -0.61
CALD1-203ENST00000393118 LNX1Q8TBB1 728 aaPredicted RBP11.25□□□□□ -0.61
CALD1-203ENST00000393118 FBF1Q8TES7 1133 aa11.25□□□□□ -0.61
CALD1-203ENST00000393118 MAIP1Q8WWC4 291 aa11.25□□□□□ -0.61
CALD1-203ENST00000393118 ANAPC5Q9UJX4 755 aa11.25□□□□□ -0.61
CALD1-203ENST00000393118 IGLV3-22A0A075B6J6 115 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 KLRG2A4D1S0 409 aaPredicted RBP11.24□□□□□ -0.61
CALD1-203ENST00000393118 PPP1R37O75864 691 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 SPIRE1Q08AE8 756 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 TEX13BQ9BXU2 312 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 MAK16Q9BXY0 300 aaKnown RBP11.24□□□□□ -0.61
CALD1-203ENST00000393118 TMEM117Q9H0C3 514 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 SUDS3Q9H7L9 328 aaPredicted RBP11.24□□□□□ -0.61
CALD1-203ENST00000393118 TTC7AQ9ULT0 858 aaPredicted RBP11.24□□□□□ -0.61
CALD1-203ENST00000393118 LRP5O75197 1615 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 UBE4BO95155 1302 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 LRRD1A4D1F6 860 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms