RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 NELFBQ8WX92 580 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 TSG101Q99816 390 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.48□□□□□ -0.09
USP44-202ENST00000393091 EIF2AQ9BY44 585 aaKnown RBP14.48□□□□□ -0.09
USP44-202ENST00000393091 AGO2Q9UKV8 859 aaKnown RBP14.48□□□□□ -0.09
USP44-202ENST00000393091 DGKIO75912 1065 aa14.47□□□□□ -0.09
USP44-202ENST00000393091 EFEMP2O95967 443 aa14.47□□□□□ -0.09
USP44-202ENST00000393091 GTF2H1P32780 548 aa14.47□□□□□ -0.09
USP44-202ENST00000393091 CDKAL1Q5VV42 579 aa14.47□□□□□ -0.09
USP44-202ENST00000393091 FRMD5Q7Z6J6 570 aa14.47□□□□□ -0.09
USP44-202ENST00000393091 XXYLT1Q8NBI6 393 aa14.47□□□□□ -0.09
USP44-202ENST00000393091 ERCC4Q92889 916 aaPredicted RBP14.47□□□□□ -0.09
USP44-202ENST00000393091 ATG2AQ2TAZ0 1938 aa14.47□□□□□ -0.09
USP44-202ENST00000393091 FGFR1OPO95684 399 aaKnown RBP14.47□□□□□ -0.09
USP44-202ENST00000393091 FGFR4P22455 802 aa14.47□□□□□ -0.09
USP44-202ENST00000393091 AP3M2P53677 418 aa14.47□□□□□ -0.09
USP44-202ENST00000393091 PMS1P54277 932 aaKnown RBP14.47□□□□□ -0.09
USP44-202ENST00000393091 MLLT1Q03111 559 aaPredicted RBP14.47□□□□□ -0.09
USP44-202ENST00000393091 ZNF568Q3ZCX4 644 aa14.47□□□□□ -0.09
USP44-202ENST00000393091 SPATA1Q5VX52 437 aa14.47□□□□□ -0.09
USP44-202ENST00000393091 FAXDC2Q96IV6 333 aa14.47□□□□□ -0.09
USP44-202ENST00000393091 GZF1Q9H116 711 aaPredicted RBP14.47□□□□□ -0.09
USP44-202ENST00000393091 MTIF3Q9H2K0 278 aaKnown RBP14.47□□□□□ -0.09
USP44-202ENST00000393091 C2CD2Q9Y426 696 aa14.47□□□□□ -0.09
USP44-202ENST00000393091 AGMOQ6ZNB7 445 aa14.46□□□□□ -0.09
USP44-202ENST00000393091 ZNF365Q70YC5 407 aa14.46□□□□□ -0.09
USP44-202ENST00000393091 CASD1Q96PB1 797 aa14.46□□□□□ -0.09
USP44-202ENST00000393091 NAT10Q9H0A0 1025 aaKnown RBP14.46□□□□□ -0.09
USP44-202ENST00000393091 COL4A4P53420 1690 aaPredicted RBP14.46□□□□□ -0.09
USP44-202ENST00000393091 NPTXRO95502 500 aa14.46□□□□□ -0.09
USP44-202ENST00000393091 NCAPHQ15003 741 aa14.46□□□□□ -0.09
USP44-202ENST00000393091 IQCB1Q15051 598 aa14.46□□□□□ -0.09
USP44-202ENST00000393091 PPP1R10Q96QC0 940 aaKnown RBP14.46□□□□□ -0.09
USP44-202ENST00000393091 MSTO1Q9BUK6 570 aa14.46□□□□□ -0.09
USP44-202ENST00000393091 KANSL3Q9P2N6 904 aa14.46□□□□□ -0.09
USP44-202ENST00000393091 H0YGN5 161 aa14.46□□□□□ -0.1
USP44-202ENST00000393091 OFD1O75665 1012 aa14.46□□□□□ -0.1
USP44-202ENST00000393091 STAU1O95793 577 aaKnown RBP14.46□□□□□ -0.1
USP44-202ENST00000393091 PPP2R3AQ06190 1150 aa14.46□□□□□ -0.1
USP44-202ENST00000393091 SYCP3Q8IZU3 236 aa14.46□□□□□ -0.1
USP44-202ENST00000393091 GSTCDQ8NEC7 633 aa14.46□□□□□ -0.1
USP44-202ENST00000393091 ZBTB45Q96K62 511 aaPredicted RBP14.46□□□□□ -0.1
USP44-202ENST00000393091 CBWD1Q9BRT8 395 aa14.46□□□□□ -0.1
USP44-202ENST00000393091 TMEM117Q9H0C3 514 aa14.46□□□□□ -0.1
USP44-202ENST00000393091 LRRC10BA6NIK2 292 aa14.45□□□□□ -0.1
USP44-202ENST00000393091 LINC00271P0C7V0 271 aa14.45□□□□□ -0.1
USP44-202ENST00000393091 ZNF18P17022 549 aa14.45□□□□□ -0.1
USP44-202ENST00000393091 ARMCX5Q6P1M9 558 aa14.45□□□□□ -0.1
USP44-202ENST00000393091 C15orf39Q6ZRI6 1047 aa14.45□□□□□ -0.1
USP44-202ENST00000393091 SMYD4Q8IYR2 804 aaPredicted RBP14.45□□□□□ -0.1
USP44-202ENST00000393091 PPP1R16BQ96T49 567 aa14.45□□□□□ -0.1
USP44-202ENST00000393091 TMEM175Q9BSA9 504 aa14.45□□□□□ -0.1
USP44-202ENST00000393091 HSD3B7Q9H2F3 369 aa14.45□□□□□ -0.1
USP44-202ENST00000393091 METTL14Q9HCE5 456 aaKnown RBP14.45□□□□□ -0.1
USP44-202ENST00000393091 CSDE1O75534 798 aaKnown RBP14.45□□□□□ -0.1
USP44-202ENST00000393091 CYP24A1Q07973 514 aa14.45□□□□□ -0.1
USP44-202ENST00000393091 DSC1Q08554 894 aa14.45□□□□□ -0.1
USP44-202ENST00000393091 ENOX2Q16206 610 aaKnown RBP14.45□□□□□ -0.1
USP44-202ENST00000393091 UROC1Q96N76 676 aa14.45□□□□□ -0.1
USP44-202ENST00000393091 CCDC94Q9BW85 323 aaPredicted RBP14.45□□□□□ -0.1
USP44-202ENST00000393091 MRPL9Q9BYD2 267 aaKnown RBP14.45□□□□□ -0.1
USP44-202ENST00000393091 TMEM189-UBE2V1I3L0A0 370 aa14.44□□□□□ -0.1
USP44-202ENST00000393091 SLC10A6Q3KNW5 377 aa14.44□□□□□ -0.1
USP44-202ENST00000393091 C11orf57Q6ZUT1 292 aaPredicted RBP14.44□□□□□ -0.1
USP44-202ENST00000393091 IRF2BP1Q8IU81 584 aa14.44□□□□□ -0.1
USP44-202ENST00000393091 DHX40Q8IX18 779 aaKnown RBP14.44□□□□□ -0.1
USP44-202ENST00000393091 CXorf38Q8TB03 319 aa14.44□□□□□ -0.1
USP44-202ENST00000393091 ZNF668Q96K58 619 aaPredicted RBP14.44□□□□□ -0.1
USP44-202ENST00000393091 ACAP3Q96P50 834 aa14.44□□□□□ -0.1
USP44-202ENST00000393091 FAM124BQ9H5Z6 455 aaPredicted RBP14.44□□□□□ -0.1
USP44-202ENST00000393091 TOPORSQ9NS56 1045 aaPredicted RBP14.44□□□□□ -0.1
USP44-202ENST00000393091 ZMYND8Q9ULU4 1186 aaPredicted RBP14.44□□□□□ -0.1
USP44-202ENST00000393091 ITGA4P13612 1032 aa14.44□□□□□ -0.1
USP44-202ENST00000393091 PSMC2P35998 433 aaKnown RBP14.44□□□□□ -0.1
USP44-202ENST00000393091 CLLU1OSQ5K130 101 aa14.44□□□□□ -0.1
USP44-202ENST00000393091 TWF2Q6IBS0 349 aaKnown RBP14.44□□□□□ -0.1
USP44-202ENST00000393091 INTS8Q75QN2 995 aaKnown RBP14.44□□□□□ -0.1
USP44-202ENST00000393091 POMGNT1Q8WZA1 660 aa14.44□□□□□ -0.1
USP44-202ENST00000393091 CLP1Q92989 425 aaKnown RBP14.44□□□□□ -0.1
USP44-202ENST00000393091 BICD1Q96G01 975 aa14.44□□□□□ -0.1
USP44-202ENST00000393091 ZNF233A6NK53 670 aa14.44□□□□□ -0.1
USP44-202ENST00000393091 LRPAP1P30533 357 aa14.44□□□□□ -0.1
USP44-202ENST00000393091 GRIK3Q13003 919 aa14.44□□□□□ -0.1
USP44-202ENST00000393091 SNRNP35Q16560 246 aaKnown RBP14.44□□□□□ -0.1
USP44-202ENST00000393091 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.44□□□□□ -0.1
USP44-202ENST00000393091 WDR49Q8IV35 697 aa14.44□□□□□ -0.1
USP44-202ENST00000393091 GPR65Q8IYL9 337 aa14.44□□□□□ -0.1
USP44-202ENST00000393091 STK39Q9UEW8 545 aa14.44□□□□□ -0.1
USP44-202ENST00000393091 CTNND2Q9UQB3 1225 aa14.44□□□□□ -0.1
USP44-202ENST00000393091 PCDHB7Q9Y5E2 793 aa14.44□□□□□ -0.1
USP44-202ENST00000393091 CETN3O15182 167 aa14.43□□□□□ -0.1
USP44-202ENST00000393091 GJB5O95377 273 aa14.43□□□□□ -0.1
USP44-202ENST00000393091 NFX1Q12986 1120 aaKnown RBP14.43□□□□□ -0.1
USP44-202ENST00000393091 DEFB128Q7Z7B8 93 aa14.43□□□□□ -0.1
USP44-202ENST00000393091 NELFCDQ8IXH7 590 aa14.43□□□□□ -0.1
USP44-202ENST00000393091 NXF3Q9H4D5 531 aaKnown RBP14.43□□□□□ -0.1
USP44-202ENST00000393091 RSAD1Q9HA92 442 aa14.43□□□□□ -0.1
USP44-202ENST00000393091 PCDHA11Q9Y5I1 949 aa14.43□□□□□ -0.1
USP44-202ENST00000393091 PLXNA4Q9HCM2 1894 aa14.43□□□□□ -0.1
USP44-202ENST00000393091 SYCE3A1L190 88 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms