RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 SSX2IPQ9Y2D8 614 aa13.9□□□□□ -0.19
GGPS1-203ENST00000391855 IRAK3Q9Y616 596 aa13.9□□□□□ -0.19
GGPS1-203ENST00000391855 DLL1O00548 723 aa13.89□□□□□ -0.19
GGPS1-203ENST00000391855 B4GALT3O60512 393 aa13.89□□□□□ -0.19
GGPS1-203ENST00000391855 PIGRP01833 764 aa13.89□□□□□ -0.19
GGPS1-203ENST00000391855 THP07101 528 aa13.89□□□□□ -0.19
GGPS1-203ENST00000391855 BMP1P13497 986 aa13.89□□□□□ -0.19
GGPS1-203ENST00000391855 GAP43P17677 238 aa13.89□□□□□ -0.19
GGPS1-203ENST00000391855 OR1G1P47890 313 aa13.89□□□□□ -0.19
GGPS1-203ENST00000391855 NDUFV1P49821 464 aa13.89□□□□□ -0.19
GGPS1-203ENST00000391855 PKP1Q13835 747 aa13.89□□□□□ -0.19
GGPS1-203ENST00000391855 NOLC1Q14978 699 aaKnown RBP eCLIP13.89□□□□□ -0.19
GGPS1-203ENST00000391855 KYAT1Q16773 422 aa13.89□□□□□ -0.19
GGPS1-203ENST00000391855 EP400NLQ6ZTU2 488 aa13.89□□□□□ -0.19
GGPS1-203ENST00000391855 VPS52Q8N1B4 723 aa13.89□□□□□ -0.19
GGPS1-203ENST00000391855 MRPL43Q8N983 215 aaKnown RBP13.89□□□□□ -0.19
GGPS1-203ENST00000391855 ADAMTS19Q8TE59 1207 aa13.89□□□□□ -0.19
GGPS1-203ENST00000391855 PYM1Q9BRP8 204 aaKnown RBP13.89□□□□□ -0.19
GGPS1-203ENST00000391855 TNMDQ9H2S6 317 aa13.89□□□□□ -0.19
GGPS1-203ENST00000391855 ZHX3Q9H4I2 956 aa13.89□□□□□ -0.19
GGPS1-203ENST00000391855 IGFLR1Q9H665 355 aa13.89□□□□□ -0.19
GGPS1-203ENST00000391855 MAGEF1Q9HAY2 307 aa13.89□□□□□ -0.19
GGPS1-203ENST00000391855 MIOSQ9NXC5 875 aa13.89□□□□□ -0.19
GGPS1-203ENST00000391855 KLK14Q9P0G3 267 aa13.89□□□□□ -0.19
GGPS1-203ENST00000391855 PRG3Q9Y2Y8 225 aaPredicted RBP13.89□□□□□ -0.19
GGPS1-203ENST00000391855 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.89□□□□□ -0.19
GGPS1-203ENST00000391855 SOD2P04179 222 aa13.88□□□□□ -0.19
GGPS1-203ENST00000391855 LTBRP36941 435 aa13.88□□□□□ -0.19
GGPS1-203ENST00000391855 ME1P48163 572 aa13.88□□□□□ -0.19
GGPS1-203ENST00000391855 KCNQ1P51787 676 aa13.88□□□□□ -0.19
GGPS1-203ENST00000391855 KRT85P78386 507 aa13.88□□□□□ -0.19
GGPS1-203ENST00000391855 GPR65Q8IYL9 337 aa13.88□□□□□ -0.19
GGPS1-203ENST00000391855 BCL7CQ8WUZ0 217 aaPredicted RBP13.88□□□□□ -0.19
GGPS1-203ENST00000391855 DDX12PQ92771 950 aa13.88□□□□□ -0.19
GGPS1-203ENST00000391855 BICD1Q96G01 975 aa13.88□□□□□ -0.19
GGPS1-203ENST00000391855 HERC2P3Q9BVR0 1158 aa13.88□□□□□ -0.19
GGPS1-203ENST00000391855 MARCH5Q9NX47 278 aa13.88□□□□□ -0.19
GGPS1-203ENST00000391855 FAM13BQ9NYF5 915 aa13.88□□□□□ -0.19
GGPS1-203ENST00000391855 USP20Q9Y2K6 914 aa13.88□□□□□ -0.19
GGPS1-203ENST00000391855 GDAQ9Y2T3 454 aa13.88□□□□□ -0.19
GGPS1-203ENST00000391855 PCDHGC5Q9Y5F6 944 aa13.88□□□□□ -0.19
GGPS1-203ENST00000391855 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.87□□□□□ -0.19
GGPS1-203ENST00000391855 C2orf71A6NGG8 1288 aa13.87□□□□□ -0.19
GGPS1-203ENST00000391855 ABLIM1O14639 778 aa13.87□□□□□ -0.19
GGPS1-203ENST00000391855 PTGESO14684 152 aa13.87□□□□□ -0.19
GGPS1-203ENST00000391855 HNRNPDLO14979 420 aaKnown RBP13.87□□□□□ -0.19
GGPS1-203ENST00000391855 CLDN3O15551 220 aa13.87□□□□□ -0.19
GGPS1-203ENST00000391855 TBX10O75333 385 aa13.87□□□□□ -0.19
GGPS1-203ENST00000391855 URODP06132 367 aa13.87□□□□□ -0.19
GGPS1-203ENST00000391855 LIG4P49917 911 aa13.87□□□□□ -0.19
GGPS1-203ENST00000391855 GTF2BQ00403 316 aa13.87□□□□□ -0.19
GGPS1-203ENST00000391855 DNM1Q05193 864 aaKnown RBP13.87□□□□□ -0.19
GGPS1-203ENST00000391855 MCL1Q07820 350 aa13.87□□□□□ -0.19
GGPS1-203ENST00000391855 SMAD4Q13485 552 aaKnown RBP13.87□□□□□ -0.19
GGPS1-203ENST00000391855 HSP90AA2PQ14568 343 aaPredicted RBP13.87□□□□□ -0.19
GGPS1-203ENST00000391855 PTCRAQ6ISU1 281 aaPredicted RBP13.87□□□□□ -0.19
GGPS1-203ENST00000391855 TMEM184AQ6ZMB5 413 aa13.87□□□□□ -0.19
GGPS1-203ENST00000391855 RBM23Q86U06 439 aaKnown RBP13.87□□□□□ -0.19
GGPS1-203ENST00000391855 PPFIBP1Q86W92 1011 aa13.87□□□□□ -0.19
GGPS1-203ENST00000391855 MAP4K3Q8IVH8 894 aa13.87□□□□□ -0.19
GGPS1-203ENST00000391855 IQUBQ8NA54 791 aa13.87□□□□□ -0.19
GGPS1-203ENST00000391855 TMEM87AQ8NBN3 555 aa13.87□□□□□ -0.19
GGPS1-203ENST00000391855 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.87□□□□□ -0.19
GGPS1-203ENST00000391855 CASP10Q92851 521 aa13.87□□□□□ -0.19
GGPS1-203ENST00000391855 ACAP3Q96P50 834 aa13.87□□□□□ -0.19
GGPS1-203ENST00000391855 UHRF1Q96T88 793 aaPredicted RBP13.87□□□□□ -0.19
GGPS1-203ENST00000391855 SLC38A7Q9NVC3 462 aa13.87□□□□□ -0.19
GGPS1-203ENST00000391855 ANKFY1Q9P2R3 1169 aa13.87□□□□□ -0.19
GGPS1-203ENST00000391855 CD207Q9UJ71 328 aa13.87□□□□□ -0.19
GGPS1-203ENST00000391855 RCOR1Q9UKL0 485 aa13.87□□□□□ -0.19
GGPS1-203ENST00000391855 TBX20Q9UMR3 447 aa13.87□□□□□ -0.19
GGPS1-203ENST00000391855 MYO7AQ13402 2215 aa13.86□□□□□ -0.19
GGPS1-203ENST00000391855 A0A087X0B3 334 aa13.86□□□□□ -0.19
GGPS1-203ENST00000391855 MYMKA6NI61 221 aa13.86□□□□□ -0.19
GGPS1-203ENST00000391855 HIDE1A8MVS5 230 aa13.86□□□□□ -0.19
GGPS1-203ENST00000391855 H3BQ06 376 aaPredicted RBP13.86□□□□□ -0.19
GGPS1-203ENST00000391855 CXCL14O95715 111 aa13.86□□□□□ -0.19
GGPS1-203ENST00000391855 CA8P35219 290 aa13.86□□□□□ -0.19
GGPS1-203ENST00000391855 GTF2F1P35269 517 aaKnown RBP eCLIP13.86□□□□□ -0.192e-6■■■■□ 26
GGPS1-203ENST00000391855 AMPD3Q01432 767 aa13.86□□□□□ -0.19
GGPS1-203ENST00000391855 ELAVL2Q12926 359 aaKnown RBP13.86□□□□□ -0.19
GGPS1-203ENST00000391855 ALCAMQ13740 583 aa13.86□□□□□ -0.19
GGPS1-203ENST00000391855 PTPN14Q15678 1187 aa13.86□□□□□ -0.19
GGPS1-203ENST00000391855 FOXD4L6Q3SYB3 417 aaPredicted RBP13.86□□□□□ -0.19
GGPS1-203ENST00000391855 XKR4Q5GH76 650 aa13.86□□□□□ -0.19
GGPS1-203ENST00000391855 AXDND1Q5T1B0 1012 aaPredicted RBP13.86□□□□□ -0.19
GGPS1-203ENST00000391855 SHC4Q6S5L8 630 aa13.86□□□□□ -0.19
GGPS1-203ENST00000391855 FOXD4L3Q6VB84 417 aaPredicted RBP13.86□□□□□ -0.19
GGPS1-203ENST00000391855 DYMQ7RTS9 669 aa13.86□□□□□ -0.19
GGPS1-203ENST00000391855 ZBTB33Q86T24 672 aa13.86□□□□□ -0.19
GGPS1-203ENST00000391855 RNF168Q8IYW5 571 aaPredicted RBP13.86□□□□□ -0.19
GGPS1-203ENST00000391855 PDILTQ8N807 584 aa13.86□□□□□ -0.19
GGPS1-203ENST00000391855 MSLNLQ96KJ4 702 aa13.86□□□□□ -0.19
GGPS1-203ENST00000391855 SNX27Q96L92 541 aa13.86□□□□□ -0.19
GGPS1-203ENST00000391855 UROC1Q96N76 676 aa13.86□□□□□ -0.19
GGPS1-203ENST00000391855 FIZ1Q96SL8 496 aa13.86□□□□□ -0.19
GGPS1-203ENST00000391855 EMILIN2Q9BXX0 1053 aa13.86□□□□□ -0.19
GGPS1-203ENST00000391855 OLFML3Q9NRN5 406 aa13.86□□□□□ -0.19
GGPS1-203ENST00000391855 MRPL17Q9NRX2 175 aaKnown RBP13.86□□□□□ -0.19
GGPS1-203ENST00000391855 ADAM28Q9UKQ2 775 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms