RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 NSFL1CQ9UNZ2 370 aaKnown RBP7.26□□□□□ -1.25
TRAV35-201ENST00000390462 MAN2B2Q9Y2E5 1009 aa7.26□□□□□ -1.25
TRAV35-201ENST00000390462 PCDHB1Q9Y5F3 818 aa7.26□□□□□ -1.25
TRAV35-201ENST00000390462 NUMBLQ9Y6R0 609 aa7.26□□□□□ -1.25
TRAV35-201ENST00000390462 EPRSP07814 1512 aaKnown RBP7.26□□□□□ -1.25
TRAV35-201ENST00000390462 WRNQ14191 1432 aaPredicted RBP eCLIP7.26□□□□□ -1.25
TRAV35-201ENST00000390462 WTIPA6NIX2 430 aaPredicted RBP7.25□□□□□ -1.25
TRAV35-201ENST00000390462 LCE2BO14633 110 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 GSTM1P09488 218 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 RARBP10826 455 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 ACTN2P35609 894 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 POLD2P49005 469 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 SOX4Q06945 474 aaPredicted RBP7.25□□□□□ -1.25
TRAV35-201ENST00000390462 CUL4AQ13619 759 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 SPIDRQ14159 915 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 DCTN1Q14203 1278 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 PLS1Q14651 629 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 DNAJC21Q5F1R6 531 aaKnown RBP7.25□□□□□ -1.25
TRAV35-201ENST00000390462 CATSPEREQ5SY80 951 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 NUTM2GQ5VZR2 741 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 SULT6B1Q6IMI4 303 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 TIGD7Q6NT04 549 aaPredicted RBP7.25□□□□□ -1.25
TRAV35-201ENST00000390462 ZNF449Q6P9G9 518 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 C20orf204Q6ZNR8 217 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 MIGA2Q7L4E1 593 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 RIOX2Q8IUF8 465 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 TRMT2AQ8IZ69 625 aaKnown RBP7.25□□□□□ -1.25
TRAV35-201ENST00000390462 NLGN4XQ8N0W4 816 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 DTWD2Q8NBA8 298 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 APPL2Q8NEU8 664 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 CYP2W1Q8TAV3 490 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 OTUD7AQ8TE49 926 aaPredicted RBP7.25□□□□□ -1.25
TRAV35-201ENST00000390462 STYXQ8WUJ0 223 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 ATP2A3Q93084 1043 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 TBC1D31Q96DN5 1066 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 IQCDQ96DY2 449 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 ASIC4Q96FT7 647 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 CCDC34Q96HJ3 373 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 SUCLG2Q96I99 432 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 EIF2AQ9BY44 585 aaKnown RBP7.25□□□□□ -1.25
TRAV35-201ENST00000390462 XPO4Q9C0E2 1151 aaKnown RBP7.25□□□□□ -1.25
TRAV35-201ENST00000390462 PAIP1Q9H074 479 aaKnown RBP7.25□□□□□ -1.25
TRAV35-201ENST00000390462 SAYSD1Q9NPB0 183 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 SERHLQ9NQF3 203 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 KRT84Q9NSB2 600 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 LMBRD1Q9NUN5 540 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 TMEM160Q9NX00 188 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 FEM1BQ9UK73 627 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 STARD13Q9Y3M8 1113 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 ATP23Q9Y6H3 246 aa7.25□□□□□ -1.25
TRAV35-201ENST00000390462 ZCCHC11Q5TAX3 1644 aaKnown RBP7.25□□□□□ -1.25
TRAV35-201ENST00000390462 PTPRMP28827 1452 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 MEGF11A6BM72 1044 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 LRRC14BA6NHZ5 514 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 RBAK-RBAKDNI3L0D1 243 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 FAM155BO75949 473 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 SGPL1O95470 568 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 IGHDP01880 384 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 ITGA5P08648 1049 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 NPR1P16066 1061 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 ALAS2P22557 587 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 SDHAP31040 664 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 HOXD13P35453 343 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 COPAP53621 1224 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 ARF3P61204 181 aaPredicted RBP7.24□□□□□ -1.25
TRAV35-201ENST00000390462 ARF1P84077 181 aaKnown RBP7.24□□□□□ -1.25
TRAV35-201ENST00000390462 ADRM1Q16186 407 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 UVSSAQ2YD98 709 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 Q6ZNB5 142 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 WAPLQ7Z5K2 1190 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 NLRP10Q86W26 655 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 LYSMD2Q8IV50 215 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 ZNF655Q8N720 491 aaPredicted RBP7.24□□□□□ -1.25
TRAV35-201ENST00000390462 DAGLBQ8NCG7 672 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 C3orf20Q8ND61 904 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 ST8SIA4Q92187 359 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 FAM167AQ96KS9 214 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 MYL10Q9BUA6 226 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 HDAC8Q9BY41 377 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 ARHGAP39Q9C0H5 1083 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 SUGCTQ9HAC7 445 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 COL20A1Q9P218 1284 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 IGSF9Q9P2J2 1179 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 NXF1Q9UBU9 619 aaKnown RBP7.24□□□□□ -1.25
TRAV35-201ENST00000390462 AFF4Q9UHB7 1163 aaKnown RBP7.24□□□□□ -1.25
TRAV35-201ENST00000390462 CPA4Q9UI42 421 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 GGA1Q9UJY5 639 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 PCDHA13Q9Y5I0 950 aa7.24□□□□□ -1.25
TRAV35-201ENST00000390462 MADDQ8WXG6 1647 aa7.23□□□□□ -1.25
TRAV35-201ENST00000390462 KIAA0586Q9BVV6 1533 aa7.23□□□□□ -1.25
TRAV35-201ENST00000390462 ST20-MTHFSA0A0A6YYL1 179 aa7.23□□□□□ -1.25
TRAV35-201ENST00000390462 SHISA3A0PJX4 238 aa7.23□□□□□ -1.25
TRAV35-201ENST00000390462 C7orf72A4D263 438 aa7.23□□□□□ -1.25
TRAV35-201ENST00000390462 PODXLO00592 558 aa7.23□□□□□ -1.25
TRAV35-201ENST00000390462 FSBPO95073 299 aa7.23□□□□□ -1.25
TRAV35-201ENST00000390462 ZNF205O95201 554 aa7.23□□□□□ -1.25
TRAV35-201ENST00000390462 TNFRSF6BO95407 300 aa7.23□□□□□ -1.25
TRAV35-201ENST00000390462 HSPA4LO95757 839 aa7.23□□□□□ -1.25
TRAV35-201ENST00000390462 MYL4P12829 197 aa7.23□□□□□ -1.25
TRAV35-201ENST00000390462 GSPT1P15170 499 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms