RNA–Protein interactions for RNA: ENST00000390457.2

TRAV27-201, Transcript of T cell receptor alpha variable 27, humanhuman

APPRIS P1 BASIC

Gene TRAV27, Length 425 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27-201ENST00000390457 LXNQ9BS40 222 aa7.82□□□□□ -1.16
TRAV27-201ENST00000390457 RPP25Q9BUL9 199 aaKnown RBP7.82□□□□□ -1.16
TRAV27-201ENST00000390457 NFKBIZQ9BYH8 718 aa7.82□□□□□ -1.16
TRAV27-201ENST00000390457 PRKD2Q9BZL6 878 aa7.82□□□□□ -1.16
TRAV27-201ENST00000390457 ZDHHC7Q9NXF8 308 aa7.82□□□□□ -1.16
TRAV27-201ENST00000390457 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.82□□□□□ -1.16
TRAV27-201ENST00000390457 KCNJ14Q9UNX9 436 aa7.82□□□□□ -1.16
TRAV27-201ENST00000390457 GIT1Q9Y2X7 761 aa7.82□□□□□ -1.16
TRAV27-201ENST00000390457 ARID2Q68CP9 1835 aa7.82□□□□□ -1.16
TRAV27-201ENST00000390457 ZMYM2Q9UBW7 1377 aa7.82□□□□□ -1.16
TRAV27-201ENST00000390457 ZFHX4Q86UP3 3567 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 A0A1B0GUA9 196 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 EPB41L2O43491 1005 aaKnown RBP7.81□□□□□ -1.16
TRAV27-201ENST00000390457 ZMYND10O75800 440 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 SP9P0CG40 484 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 MYBP10242 640 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 STARD6P59095 220 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 CAPSQ13938 189 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 CTTNQ14247 550 aaKnown RBP7.81□□□□□ -1.16
TRAV27-201ENST00000390457 MXD4Q14582 209 aaPredicted RBP7.81□□□□□ -1.16
TRAV27-201ENST00000390457 NAB2Q15742 525 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 USP41Q3LFD5 358 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 NOTUMQ6P988 496 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 OTUD6AQ7L8S5 288 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 NEK8Q86SG6 692 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 PALB2Q86YC2 1186 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 SUMF1Q8NBK3 374 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 OXER1Q8TDS5 423 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 ASAP3Q8TDY4 903 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 FGF14Q92915 247 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 DYDC2Q96IM9 177 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 CPB2Q96IY4 423 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 PAAF1Q9BRP4 392 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 DDX23Q9BUQ8 820 aaKnown RBP7.81□□□□□ -1.16
TRAV27-201ENST00000390457 COLEC11Q9BWP8 271 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 TM6SF1Q9BZW5 370 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 NXF3Q9H4D5 531 aaKnown RBP7.81□□□□□ -1.16
TRAV27-201ENST00000390457 ZSWIM4Q9H7M6 989 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.81□□□□□ -1.16
TRAV27-201ENST00000390457 GJB4Q9NTQ9 266 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 ADAM28Q9UKQ2 775 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 CA14Q9ULX7 337 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 R4GN57 208 aa7.81□□□□□ -1.16
TRAV27-201ENST00000390457 MED19A0JLT2 244 aaPredicted RBP7.8□□□□□ -1.16
TRAV27-201ENST00000390457 B4GALT5O43286 388 aa7.8□□□□□ -1.16
TRAV27-201ENST00000390457 ERLIN2O94905 339 aa7.8□□□□□ -1.16
TRAV27-201ENST00000390457 DCNP07585 359 aaKnown RBP7.8□□□□□ -1.16
TRAV27-201ENST00000390457 RPL17P18621 184 aaKnown RBP7.8□□□□□ -1.16
TRAV27-201ENST00000390457 GLRA2P23416 452 aa7.8□□□□□ -1.16
TRAV27-201ENST00000390457 AKAP5P24588 427 aa7.8□□□□□ -1.16
TRAV27-201ENST00000390457 GPC5P78333 572 aa7.8□□□□□ -1.16
TRAV27-201ENST00000390457 XKR9Q5GH70 373 aa7.8□□□□□ -1.16
TRAV27-201ENST00000390457 RTP2Q5QGT7 225 aa7.8□□□□□ -1.16
TRAV27-201ENST00000390457 ELMSAN1Q6PJG2 1045 aa7.8□□□□□ -1.16
TRAV27-201ENST00000390457 DCLRE1AQ6PJP8 1040 aa7.8□□□□□ -1.16
TRAV27-201ENST00000390457 C1orf210Q8IVY1 113 aa7.8□□□□□ -1.16
TRAV27-201ENST00000390457 PJA1Q8NG27 643 aa7.8□□□□□ -1.16
TRAV27-201ENST00000390457 LNX1Q8TBB1 728 aaPredicted RBP7.8□□□□□ -1.16
TRAV27-201ENST00000390457 RIN2Q8WYP3 895 aaPredicted RBP7.8□□□□□ -1.16
TRAV27-201ENST00000390457 PIK3R5Q8WYR1 880 aa7.8□□□□□ -1.16
TRAV27-201ENST00000390457 TNFRSF25Q93038 417 aa7.8□□□□□ -1.16
TRAV27-201ENST00000390457 MTRQ99707 1265 aa7.8□□□□□ -1.16
TRAV27-201ENST00000390457 CLSTN3Q9BQT9 956 aa7.8□□□□□ -1.16
TRAV27-201ENST00000390457 LARP6Q9BRS8 491 aaKnown RBP7.8□□□□□ -1.16
TRAV27-201ENST00000390457 FOXQ1Q9C009 403 aa7.8□□□□□ -1.16
TRAV27-201ENST00000390457 CXCL16Q9H2A7 254 aa7.8□□□□□ -1.16
TRAV27-201ENST00000390457 ARHGEF3Q9NR81 526 aa7.8□□□□□ -1.16
TRAV27-201ENST00000390457 DLL3Q9NYJ7 618 aa7.8□□□□□ -1.16
TRAV27-201ENST00000390457 FBXW11Q9UKB1 542 aa7.8□□□□□ -1.16
TRAV27-201ENST00000390457 SIT1Q9Y3P8 196 aa7.8□□□□□ -1.16
TRAV27-201ENST00000390457 ZFP37Q9Y6Q3 630 aaPredicted RBP7.8□□□□□ -1.16
TRAV27-201ENST00000390457 NUMBLQ9Y6R0 609 aa7.8□□□□□ -1.16
TRAV27-201ENST00000390457 VWA8A3KMH1 1905 aa7.8□□□□□ -1.16
TRAV27-201ENST00000390457 MYH15Q9Y2K3 1946 aa7.8□□□□□ -1.16
TRAV27-201ENST00000390457 CACNA1GO43497 2377 aa7.79□□□□□ -1.16
TRAV27-201ENST00000390457 STK36Q9NRP7 1315 aa7.79□□□□□ -1.16
TRAV27-201ENST00000390457 CCDC194A0A1B0GVG4 234 aa7.79□□□□□ -1.16
TRAV27-201ENST00000390457 SHISA7A6NL88 538 aa7.79□□□□□ -1.16
TRAV27-201ENST00000390457 INO80B-WBP1J3KQ70 363 aa7.79□□□□□ -1.16
TRAV27-201ENST00000390457 PTGESO14684 152 aa7.79□□□□□ -1.16
TRAV27-201ENST00000390457 CPLX1O14810 134 aa7.79□□□□□ -1.16
TRAV27-201ENST00000390457 ADAM12O43184 909 aa7.79□□□□□ -1.16
TRAV27-201ENST00000390457 CCNT1O60563 726 aaKnown RBP7.79□□□□□ -1.16
TRAV27-201ENST00000390457 LRRN2O75325 713 aa7.79□□□□□ -1.16
TRAV27-201ENST00000390457 DGAT1O75907 488 aa7.79□□□□□ -1.16
TRAV27-201ENST00000390457 CTDNEP1O95476 244 aa7.79□□□□□ -1.16
TRAV27-201ENST00000390457 POU2F2P09086 479 aa7.79□□□□□ -1.16
TRAV27-201ENST00000390457 HOXB1P14653 301 aaPredicted RBP7.79□□□□□ -1.16
TRAV27-201ENST00000390457 HOXA9P31269 272 aa7.79□□□□□ -1.16
TRAV27-201ENST00000390457 RARRES1P49788 294 aa7.79□□□□□ -1.16
TRAV27-201ENST00000390457 NTHL1P78549 312 aa7.79□□□□□ -1.16
TRAV27-201ENST00000390457 CYP4A11Q02928 519 aa7.79□□□□□ -1.16
TRAV27-201ENST00000390457 SCRN1Q12765 414 aa7.79□□□□□ -1.16
TRAV27-201ENST00000390457 GRIK3Q13003 919 aa7.79□□□□□ -1.16
TRAV27-201ENST00000390457 FAM187BQ17R55 369 aa7.79□□□□□ -1.16
TRAV27-201ENST00000390457 ZNF528Q3MIS6 628 aa7.79□□□□□ -1.16
TRAV27-201ENST00000390457 SLC27A1Q6PCB7 646 aa7.79□□□□□ -1.16
TRAV27-201ENST00000390457 PRSS55Q6UWB4 352 aaPredicted RBP7.79□□□□□ -1.16
TRAV27-201ENST00000390457 PARM1Q6UWI2 310 aa7.79□□□□□ -1.16
TRAV27-201ENST00000390457 PIK3AP1Q6ZUJ8 805 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms