RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 TDRD3Q9H7E2 651 aaKnown RBP16.4■□□□□ 0.22
ALK-201ENST00000389048 RHBDL2Q9NX52 303 aa16.4■□□□□ 0.22
ALK-201ENST00000389048 ERBB3P21860 1342 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 F8W8V4 182 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 GRAP2O75791 330 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 CALB1P05937 261 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 SYNE4Q8N205 404 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 CHORDC1Q9UHD1 332 aaPredicted RBP16.39■□□□□ 0.21
ALK-201ENST00000389048 RASSF10A6NK89 507 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 LDHAP00338 332 aaKnown RBP16.39■□□□□ 0.21
ALK-201ENST00000389048 SKIV2LQ15477 1246 aaKnown RBP16.39■□□□□ 0.21
ALK-201ENST00000389048 P3H1Q32P28 736 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 EFHC2Q5JST6 749 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 TEDDM1Q5T9Z0 273 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 SUSD4Q5VX71 490 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 PPP4R3CPQ6ZMV5 832 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 BEST2Q8NFU1 509 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 CYFIP2Q96F07 1278 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 C17orf80Q9BSJ5 609 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 NFKBIL1Q9UBC1 381 aaPredicted RBP16.39■□□□□ 0.21
ALK-201ENST00000389048 EMSYQ7Z589 1322 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 APOA1P02647 267 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 ATP11CQ8NB49 1132 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 ACAP3Q96P50 834 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 IRX2Q9BZI1 471 aaPredicted RBP16.39■□□□□ 0.21
ALK-201ENST00000389048 CAB39Q9Y376 341 aaPredicted RBP16.39■□□□□ 0.21
ALK-201ENST00000389048 ZHX2Q9Y6X8 837 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 HMOX2P30519 316 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 RIN2Q8WYP3 895 aaPredicted RBP16.39■□□□□ 0.21
ALK-201ENST00000389048 KIF12Q96FN5 646 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 EXOSC4Q9NPD3 245 aaKnown RBP16.39■□□□□ 0.21
ALK-201ENST00000389048 TTC26A0AVF1 554 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 ARHGAP10A1A4S6 786 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 FKBP9O95302 570 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 FKBP9P1Q75LS8 142 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 MIER2Q8N344 545 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 FAM162AQ96A26 154 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 PHF21AQ96BD5 680 aa16.39■□□□□ 0.21
ALK-201ENST00000389048 KDM5AP29375 1690 aaKnown RBP16.38■□□□□ 0.21
ALK-201ENST00000389048 KNOP1Q1ED39 458 aaKnown RBP16.38■□□□□ 0.21
ALK-201ENST00000389048 FUT11Q495W5 492 aa16.38■□□□□ 0.21
ALK-201ENST00000389048 KRT39Q6A163 491 aa16.38■□□□□ 0.21
ALK-201ENST00000389048 HSPA9P38646 679 aaKnown RBP16.38■□□□□ 0.21
ALK-201ENST00000389048 PTPN12Q05209 780 aaKnown RBP16.38■□□□□ 0.21
ALK-201ENST00000389048 TFDP2Q14188 446 aa16.38■□□□□ 0.21
ALK-201ENST00000389048 TRAF7Q6Q0C0 670 aa16.38■□□□□ 0.21
ALK-201ENST00000389048 TRABDQ9H4I3 376 aa16.38■□□□□ 0.21
ALK-201ENST00000389048 EML4Q9HC35 981 aaKnown RBP16.38■□□□□ 0.21
ALK-201ENST00000389048 CDC27P30260 824 aa16.38■□□□□ 0.21
ALK-201ENST00000389048 PDAP1Q13442 181 aaKnown RBP16.38■□□□□ 0.21
ALK-201ENST00000389048 SPATA21Q7Z572 469 aa16.38■□□□□ 0.21
ALK-201ENST00000389048 NLRP10Q86W26 655 aa16.38■□□□□ 0.21
ALK-201ENST00000389048 THTPAQ9BU02 230 aa16.38■□□□□ 0.21
ALK-201ENST00000389048 QTRT2Q9H974 415 aaKnown RBP16.38■□□□□ 0.21
ALK-201ENST00000389048 RAD18Q9NS91 495 aa16.38■□□□□ 0.21
ALK-201ENST00000389048 TSC22D2O75157 780 aa16.38■□□□□ 0.21
ALK-201ENST00000389048 BRD2P25440 801 aaKnown RBP16.38■□□□□ 0.21
ALK-201ENST00000389048 ZNF235Q14590 738 aa16.38■□□□□ 0.21
ALK-201ENST00000389048 DDX42Q86XP3 938 aaKnown RBP eCLIP16.38■□□□□ 0.21
ALK-201ENST00000389048 WDR24Q96S15 920 aa16.38■□□□□ 0.21
ALK-201ENST00000389048 PCDHGB4Q9UN71 923 aa16.38■□□□□ 0.21
ALK-201ENST00000389048 ZNF263O14978 683 aa16.38■□□□□ 0.21
ALK-201ENST00000389048 TDP2O95551 362 aa16.38■□□□□ 0.21
ALK-201ENST00000389048 SOAT1P35610 550 aa16.38■□□□□ 0.21
ALK-201ENST00000389048 IREB2P48200 963 aaKnown RBP16.38■□□□□ 0.21
ALK-201ENST00000389048 IYDQ6PHW0 289 aa16.38■□□□□ 0.21
ALK-201ENST00000389048 SARM1Q6SZW1 724 aa16.38■□□□□ 0.21
ALK-201ENST00000389048 MFN1Q8IWA4 741 aa16.38■□□□□ 0.21
ALK-201ENST00000389048 TTC13Q8NBP0 860 aa16.38■□□□□ 0.21
ALK-201ENST00000389048 GCOM2Q9BZD3 368 aaPredicted RBP16.38■□□□□ 0.21
ALK-201ENST00000389048 PNMA8BQ9ULN7 279 aaPredicted RBP16.38■□□□□ 0.21
ALK-201ENST00000389048 KCNA3P22001 575 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 CCDC15Q0P6D6 951 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 TMEM62Q0P6H9 643 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 SYTL3Q4VX76 610 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 MAGEB5Q9BZ81 275 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 SUPT3HB4E1H0 165 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 H0Y626 953 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 TRIM16O95361 564 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 SLC16A1P53985 500 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 VSNL1P62760 191 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 TTC23LQ6PF05 361 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 ZNF473Q8WTR7 871 aaKnown RBP16.37■□□□□ 0.21
ALK-201ENST00000389048 VPS50Q96JG6 964 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 TRIM45Q9H8W5 580 aaPredicted RBP16.37■□□□□ 0.21
ALK-201ENST00000389048 LIMA1Q9UHB6 759 aaKnown RBP16.37■□□□□ 0.21
ALK-201ENST00000389048 C5orf58C9J3I9 102 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 ATMINO43313 823 aaPredicted RBP16.37■□□□□ 0.21
ALK-201ENST00000389048 CYTH3O43739 400 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 SLC9A1P19634 815 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 PRDX5P30044 214 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 PHKA2P46019 1235 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 JAK3P52333 1124 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 CCDC33Q8N5R6 958 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 TEX9Q8N6V9 391 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 C1orf131Q8NDD1 294 aaKnown RBP16.37■□□□□ 0.21
ALK-201ENST00000389048 ACSF2Q96CM8 615 aaPredicted RBP16.37■□□□□ 0.21
ALK-201ENST00000389048 OLFM3Q96PB7 478 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 MRPL40Q9NQ50 206 aaKnown RBP16.37■□□□□ 0.21
ALK-201ENST00000389048 EFCAB14O75071 495 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms