RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 FBXO42Q6P3S6 717 aa3.74□□□□□ -1.81
RNU6-1040P-201ENST00000383974 HOMER1Q86YM7 354 aa3.74□□□□□ -1.81
RNU6-1040P-201ENST00000383974 DHX37Q8IY37 1157 aaKnown RBP3.74□□□□□ -1.81
RNU6-1040P-201ENST00000383974 NIM1KQ8IY84 436 aa3.74□□□□□ -1.81
RNU6-1040P-201ENST00000383974 PPM1KQ8N3J5 372 aa3.74□□□□□ -1.81
RNU6-1040P-201ENST00000383974 SLC44A3Q8N4M1 653 aa3.74□□□□□ -1.81
RNU6-1040P-201ENST00000383974 SIMC1Q8NDZ2 872 aa3.74□□□□□ -1.81
RNU6-1040P-201ENST00000383974 SLC35B2Q8TB61 432 aa3.74□□□□□ -1.81
RNU6-1040P-201ENST00000383974 KCTD10Q9H3F6 313 aa3.74□□□□□ -1.81
RNU6-1040P-201ENST00000383974 RSAD1Q9HA92 442 aa3.74□□□□□ -1.81
RNU6-1040P-201ENST00000383974 EMC7Q9NPA0 242 aa3.74□□□□□ -1.81
RNU6-1040P-201ENST00000383974 INSL6Q9Y581 213 aa3.74□□□□□ -1.81
RNU6-1040P-201ENST00000383974 FPGT-TNNI3KV9GXZ4 949 aa3.74□□□□□ -1.81
RNU6-1040P-201ENST00000383974 CDKL5O76039 1030 aa3.73□□□□□ -1.81
RNU6-1040P-201ENST00000383974 FKBP9O95302 570 aa3.73□□□□□ -1.81
RNU6-1040P-201ENST00000383974 GASTP01350 101 aa3.73□□□□□ -1.81
RNU6-1040P-201ENST00000383974 EGR2P11161 476 aaPredicted RBP3.73□□□□□ -1.81
RNU6-1040P-201ENST00000383974 ITGAMP11215 1152 aa3.73□□□□□ -1.81
RNU6-1040P-201ENST00000383974 FLT3LGP49771 235 aa3.73□□□□□ -1.81
RNU6-1040P-201ENST00000383974 CHN2P52757 468 aa3.73□□□□□ -1.81
RNU6-1040P-201ENST00000383974 LGALS4P56470 323 aa3.73□□□□□ -1.81
RNU6-1040P-201ENST00000383974 BLOC1S1P78537 153 aa3.73□□□□□ -1.81
RNU6-1040P-201ENST00000383974 ERCC6LQ2NKX8 1250 aa3.73□□□□□ -1.81
RNU6-1040P-201ENST00000383974 AGAP9Q5VTM2 703 aa3.73□□□□□ -1.81
RNU6-1040P-201ENST00000383974 C16orf86Q6ZW13 317 aa3.73□□□□□ -1.81
RNU6-1040P-201ENST00000383974 FKBP9P1Q75LS8 142 aa3.73□□□□□ -1.81
RNU6-1040P-201ENST00000383974 C11orf74Q86VG3 221 aa3.73□□□□□ -1.81
RNU6-1040P-201ENST00000383974 BOLLQ8N9W6 283 aaKnown RBP3.73□□□□□ -1.81
RNU6-1040P-201ENST00000383974 OR2W6PQ8NHA6 318 aa3.73□□□□□ -1.81
RNU6-1040P-201ENST00000383974 ZFP28Q8NHY6 868 aa3.73□□□□□ -1.81
RNU6-1040P-201ENST00000383974 ZNF480Q8WV37 535 aa3.73□□□□□ -1.81
RNU6-1040P-201ENST00000383974 SLC5A5Q92911 643 aa3.73□□□□□ -1.81
RNU6-1040P-201ENST00000383974 PHACTR3Q96KR7 559 aa3.73□□□□□ -1.81
RNU6-1040P-201ENST00000383974 PIF1Q9H611 641 aa3.73□□□□□ -1.81
RNU6-1040P-201ENST00000383974 FANCLQ9NW38 375 aa3.73□□□□□ -1.81
RNU6-1040P-201ENST00000383974 RAB11FIP3O75154 756 aa3.72□□□□□ -1.81
RNU6-1040P-201ENST00000383974 ESRRBO95718 433 aa3.72□□□□□ -1.81
RNU6-1040P-201ENST00000383974 CFIP05156 583 aa3.72□□□□□ -1.81
RNU6-1040P-201ENST00000383974 CRHR1P34998 444 aa3.72□□□□□ -1.81
RNU6-1040P-201ENST00000383974 SCAPQ12770 1279 aa3.72□□□□□ -1.81
RNU6-1040P-201ENST00000383974 MPP3Q13368 585 aa3.72□□□□□ -1.81
RNU6-1040P-201ENST00000383974 MST1LQ2TV78 715 aa3.72□□□□□ -1.81
RNU6-1040P-201ENST00000383974 CT83Q5H943 113 aa3.72□□□□□ -1.81
RNU6-1040P-201ENST00000383974 PDZD4Q76G19 769 aaPredicted RBP3.72□□□□□ -1.81
RNU6-1040P-201ENST00000383974 FAM98AQ8NCA5 519 aaKnown RBP3.72□□□□□ -1.81
RNU6-1040P-201ENST00000383974 OR56A1Q8NGH5 318 aa3.72□□□□□ -1.81
RNU6-1040P-201ENST00000383974 NAF1Q96HR8 494 aaKnown RBP3.72□□□□□ -1.81
RNU6-1040P-201ENST00000383974 ALG13Q9NP73 1137 aaKnown RBP3.72□□□□□ -1.81
RNU6-1040P-201ENST00000383974 RNF181Q9P0P0 153 aa3.72□□□□□ -1.81
RNU6-1040P-201ENST00000383974 KCNG1Q9UIX4 513 aa3.72□□□□□ -1.81
RNU6-1040P-201ENST00000383974 EDARQ9UNE0 448 aa3.72□□□□□ -1.81
RNU6-1040P-201ENST00000383974 POLR2AP24928 1970 aaKnown RBP3.72□□□□□ -1.81
RNU6-1040P-201ENST00000383974 COL11A2P13942 1736 aaPredicted RBP3.72□□□□□ -1.81
RNU6-1040P-201ENST00000383974 DRGXA6NNA5 263 aa3.71□□□□□ -1.82
RNU6-1040P-201ENST00000383974 CXorf49A8MYA2 514 aaPredicted RBP3.71□□□□□ -1.82
RNU6-1040P-201ENST00000383974 PJA2O43164 708 aa3.71□□□□□ -1.82
RNU6-1040P-201ENST00000383974 ELANEP08246 267 aa3.71□□□□□ -1.82
RNU6-1040P-201ENST00000383974 FDXRP22570 491 aa3.71□□□□□ -1.82
RNU6-1040P-201ENST00000383974 MPLP40238 635 aa3.71□□□□□ -1.82
RNU6-1040P-201ENST00000383974 ATXN1P54253 815 aaKnown RBP3.71□□□□□ -1.82
RNU6-1040P-201ENST00000383974 MXRA7P84157 204 aa3.71□□□□□ -1.82
RNU6-1040P-201ENST00000383974 PDCD1Q15116 288 aa3.71□□□□□ -1.82
RNU6-1040P-201ENST00000383974 ATXN7L2Q5T6C5 722 aaPredicted RBP3.71□□□□□ -1.82
RNU6-1040P-201ENST00000383974 RASSF3Q86WH2 238 aa3.71□□□□□ -1.82
RNU6-1040P-201ENST00000383974 MAPKAPK5Q8IW41 473 aa3.71□□□□□ -1.82
RNU6-1040P-201ENST00000383974 RHOT2Q8IXI1 618 aa3.71□□□□□ -1.82
RNU6-1040P-201ENST00000383974 TRMT2AQ8IZ69 625 aaKnown RBP3.71□□□□□ -1.82
RNU6-1040P-201ENST00000383974 AHI1Q8N157 1196 aa3.71□□□□□ -1.82
RNU6-1040P-201ENST00000383974 REPS2Q8NFH8 660 aa3.71□□□□□ -1.82
RNU6-1040P-201ENST00000383974 FBXO18Q8NFZ0 1043 aa3.71□□□□□ -1.82
RNU6-1040P-201ENST00000383974 APPBP2Q92624 585 aa3.71□□□□□ -1.82
RNU6-1040P-201ENST00000383974 LRFN3Q9BTN0 628 aa3.71□□□□□ -1.82
RNU6-1040P-201ENST00000383974 ATP11BQ9Y2G3 1177 aa3.71□□□□□ -1.82
RNU6-1040P-201ENST00000383974 MAST3O60307 1309 aa3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 RPTORQ8N122 1335 aa3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 INO80B-WBP1J3KQ70 363 aa3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 WNT10BO00744 389 aa3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 FOSP01100 380 aaPredicted RBP3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 PTPN7P35236 360 aa3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 CLRN1P58418 232 aa3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 OCA2Q04671 838 aa3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 FAM47AQ5JRC9 791 aa3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 B3GNTL1Q67FW5 361 aaPredicted RBP3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 ARMC6Q6NXE6 501 aa3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 ZNF572Q7Z3I7 529 aaPredicted RBP3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 GPR149Q86SP6 731 aa3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 GLCCI1Q86VQ1 547 aa3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 NELL1Q92832 810 aa3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 EAF2Q96CJ1 260 aaPredicted RBP3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 MFSD3Q96ES6 412 aa3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 PAWRQ96IZ0 340 aaKnown RBP3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 INO80BQ9C086 356 aaPredicted RBP3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 WDR26Q9H7D7 661 aa3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 KLHL11Q9NVR0 708 aa3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 TESQ9UGI8 421 aaKnown RBP3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 TLK1Q9UKI8 766 aa3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 PLAAQ9Y263 795 aa3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 NOC2LQ9Y3T9 749 aaKnown RBP3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 PNPLA7Q6ZV29 1317 aa3.7□□□□□ -1.82
RNU6-1040P-201ENST00000383974 SALL3Q9BXA9 1300 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms