RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 IFT43Q96FT9 208 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 AMNQ9BXJ7 453 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 ATP8B3O60423 1300 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 XDHP47989 1333 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 CCDC195A0A1B0GUA6 201 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 ADORA2BP29275 332 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 USP14P54578 494 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 COPS2P61201 443 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 OCRLQ01968 901 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 RUNX1T1Q06455 604 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 ARMCX4Q5H9R4 360 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 PRPSAP2O60256 369 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 PYGMP11217 842 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 PEX3P56589 373 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 PDAP1Q13442 181 aaKnown RBP11.37□□□□□ -0.59
CLCN4-202ENST00000380833 TJAP1Q5JTD0 557 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 B3GNT6Q6ZMB0 384 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 TSHZ1Q6ZSZ6 1077 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.37□□□□□ -0.59
CLCN4-202ENST00000380833 EPM2AIP1Q7L775 607 aaPredicted RBP11.37□□□□□ -0.59
CLCN4-202ENST00000380833 RNASE11Q8TAA1 199 aaKnown RBP11.37□□□□□ -0.59
CLCN4-202ENST00000380833 BTN2A2Q8WVV5 523 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 SIK2Q9H0K1 926 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 CUEDC2Q9H467 287 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 TLR7Q9NYK1 1049 aaKnown RBP11.37□□□□□ -0.59
CLCN4-202ENST00000380833 SOX13Q9UN79 622 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 HBS1LQ9Y450 684 aaKnown RBP11.37□□□□□ -0.59
CLCN4-202ENST00000380833 ABCB11O95342 1321 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 EXOC1LA0A1B0GW35 172 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 TNFRSF21O75509 655 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 BMP3P12645 472 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 CCNHP51946 323 aaPredicted RBP11.37□□□□□ -0.59
CLCN4-202ENST00000380833 FAM26FQ5R3K3 315 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 FAM83BQ5T0W9 1011 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 DNAJC24Q6P3W2 148 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 SH3BP5LQ7L8J4 393 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 KRT26Q7Z3Y9 468 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 TBCKQ8TEA7 893 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 CNOT6LQ96LI5 555 aaKnown RBP11.37□□□□□ -0.59
CLCN4-202ENST00000380833 KCNG1Q9UIX4 513 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 COMMD3-BMI1R4GMX3 469 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 CFAP74Q9C0B2 1584 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 ZFYVE16Q7Z3T8 1539 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 PTPRKQ15262 1439 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 MYBL2P10244 700 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 FOSL1P15407 271 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 SCTRP47872 440 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 ATL2Q8NHH9 583 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 PANX2Q96RD6 677 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 DNAJC7Q99615 494 aa11.37□□□□□ -0.59
CLCN4-202ENST00000380833 LSG1Q9H089 658 aaKnown RBP11.37□□□□□ -0.59
CLCN4-202ENST00000380833 LIN7AO14910 233 aaPredicted RBP11.36□□□□□ -0.59
CLCN4-202ENST00000380833 GNA14O95837 355 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 ATXN7L3BQ96GX2 97 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 ZFRQ96KR1 1074 aaKnown RBP11.36□□□□□ -0.59
CLCN4-202ENST00000380833 TAF1DQ9H5J8 278 aaPredicted RBP11.36□□□□□ -0.59
CLCN4-202ENST00000380833 TDRD3Q9H7E2 651 aaKnown RBP11.36□□□□□ -0.59
CLCN4-202ENST00000380833 SOS2Q07890 1332 aaPredicted RBP11.36□□□□□ -0.59
CLCN4-202ENST00000380833 TRIM43BA6NCK2 446 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 FTCDO95954 541 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 ARL4DP49703 201 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 ADCK2Q7Z695 626 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 LRRC49Q8IUZ0 686 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 FAM9CQ8IZT9 166 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 CARD14Q9BXL6 1004 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 ANTXR1Q9H6X2 564 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 GINM1Q9NU53 330 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 NDFIP2Q9NV92 336 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 DDX18Q9NVP1 670 aaKnown RBP11.36□□□□□ -0.59
CLCN4-202ENST00000380833 ASXL1Q8IXJ9 1541 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 CCDC78A2IDD5 438 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 IKBKBO14920 756 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 FGAP02671 866 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 S100A6P06703 90 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 C11orf96Q7Z7L8 435 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 STK32CQ86UX6 486 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 ZBTB38Q8NAP3 1195 aaPredicted RBP11.36□□□□□ -0.59
CLCN4-202ENST00000380833 GALNT8Q9NY28 637 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 TELO2Q9Y4R8 837 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 HEY1Q9Y5J3 304 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 C2CD2LO14523 706 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 TBC1D12O60347 775 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 PLS3P13797 630 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 RGS2P41220 211 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 BFSP2Q13515 415 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 TRIP10Q15642 601 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 RGS21Q2M5E4 152 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 IRGCQ6NXR0 463 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 TAGAPQ8N103 731 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 THEM5Q8N1Q8 247 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 C12orf4Q9NQ89 552 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 CCDC59Q9P031 241 aaKnown RBP11.36□□□□□ -0.59
CLCN4-202ENST00000380833 TRIM24O15164 1050 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 HNRNPRO43390 633 aaKnown RBP11.36□□□□□ -0.59
CLCN4-202ENST00000380833 SRGAP2O75044 1071 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 CNOT3O75175 753 aaKnown RBP11.36□□□□□ -0.59
CLCN4-202ENST00000380833 RBL2Q08999 1139 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 RALGDSQ12967 914 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 PCNX4Q63HM2 1172 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 PLEKHM3Q6ZWE6 761 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms