RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 SLC30A5Q8TAD4 765 aa15.37■□□□□ 0.05
CLCN4-201ENST00000380829 MS4A14Q96JA4 679 aa15.37■□□□□ 0.05
CLCN4-201ENST00000380829 FBXL18Q96ME1 805 aa15.37■□□□□ 0.05
CLCN4-201ENST00000380829 NIFKQ9BYG3 293 aaKnown RBP15.37■□□□□ 0.05
CLCN4-201ENST00000380829 TUBBP07437 444 aa15.37■□□□□ 0.05
CLCN4-201ENST00000380829 TGFB3P10600 412 aa15.37■□□□□ 0.05
CLCN4-201ENST00000380829 RFX1P22670 979 aa15.37■□□□□ 0.05
CLCN4-201ENST00000380829 HSDL1Q3SXM5 330 aa15.37■□□□□ 0.05
CLCN4-201ENST00000380829 KRT39Q6A163 491 aa15.37■□□□□ 0.05
CLCN4-201ENST00000380829 GPD1LQ8N335 351 aa15.37■□□□□ 0.05
CLCN4-201ENST00000380829 PPM1KQ8N3J5 372 aa15.37■□□□□ 0.05
CLCN4-201ENST00000380829 SLC20A1Q8WUM9 679 aa15.37■□□□□ 0.05
CLCN4-201ENST00000380829 SEPT1Q8WYJ6 367 aa15.37■□□□□ 0.05
CLCN4-201ENST00000380829 RPGRIP1Q96KN7 1286 aa15.37■□□□□ 0.05
CLCN4-201ENST00000380829 SYT11Q9BT88 431 aa15.37■□□□□ 0.05
CLCN4-201ENST00000380829 SLC24A3Q9HC58 644 aa15.37■□□□□ 0.05
CLCN4-201ENST00000380829 MCM8Q9UJA3 840 aa15.37■□□□□ 0.05
CLCN4-201ENST00000380829 LRRC37A2A6NM11 1700 aa15.37■□□□□ 0.05
CLCN4-201ENST00000380829 BTNL10A8MVZ5 291 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 MATR3P43243 847 aaKnown RBP eCLIP15.36■□□□□ 0.05
CLCN4-201ENST00000380829 GALCP54803 685 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 STRN3Q13033 797 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 MKRN3Q13064 507 aaKnown RBP15.36■□□□□ 0.05
CLCN4-201ENST00000380829 PDCLQ13371 301 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 DRP2Q13474 957 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 GPR162Q16538 588 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 TMEM63BQ5T3F8 832 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 MEI1Q5TIA1 1274 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 CCDC181Q5TID7 509 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 DEPTORQ8TB45 409 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 TAS1R2Q8TE23 839 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 MFSD14AQ96MC6 490 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 TAS2R14Q9NYV8 317 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 CLEC11AQ9Y240 323 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 ABCB4P21439 1286 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 GARTP22102 1010 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 PAX7P23759 505 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 ARL2P36404 184 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 ERVK-9P63128 1117 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 SNAPC2Q13487 334 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 KIF22Q14807 665 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 LDLRAD1Q5T700 205 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 FAM160B1Q5W0V3 765 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 GLG1Q92896 1179 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 MIEF2Q96C03 454 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 SLC10A4Q96EP9 437 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 TMEM8AQ9HCN3 771 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 NRBP2Q9NSY0 501 aa15.36■□□□□ 0.05
CLCN4-201ENST00000380829 DNAJC25-GNG10A0A024R161 153 aa15.35■□□□□ 0.05
CLCN4-201ENST00000380829 H0YCG3 227 aa15.35■□□□□ 0.05
CLCN4-201ENST00000380829 NDUFAB1O14561 156 aa15.35■□□□□ 0.05
CLCN4-201ENST00000380829 TNFAIP3P21580 790 aa15.35■□□□□ 0.05
CLCN4-201ENST00000380829 MAP1SQ66K74 1059 aaPredicted RBP15.35■□□□□ 0.05
CLCN4-201ENST00000380829 LMBRD2Q68DH5 695 aaPredicted RBP15.35■□□□□ 0.05
CLCN4-201ENST00000380829 COPS5Q92905 334 aa15.35■□□□□ 0.05
CLCN4-201ENST00000380829 ZBTB45Q96K62 511 aaPredicted RBP15.35■□□□□ 0.05
CLCN4-201ENST00000380829 KREMEN1Q96MU8 473 aa15.35■□□□□ 0.05
CLCN4-201ENST00000380829 AZI2Q9H6S1 392 aa15.35■□□□□ 0.05
CLCN4-201ENST00000380829 ACP6Q9NPH0 428 aa15.35■□□□□ 0.05
CLCN4-201ENST00000380829 TSKSQ9UJT2 592 aa15.35■□□□□ 0.05
CLCN4-201ENST00000380829 DAAM1Q9Y4D1 1078 aa15.35■□□□□ 0.05
CLCN4-201ENST00000380829 NOP56O00567 594 aaKnown RBP15.35■□□□□ 0.05
CLCN4-201ENST00000380829 PMM2O15305 246 aa15.35■□□□□ 0.05
CLCN4-201ENST00000380829 RDXP35241 583 aaKnown RBP15.35■□□□□ 0.05
CLCN4-201ENST00000380829 NAMPTP43490 491 aa15.35■□□□□ 0.05
CLCN4-201ENST00000380829 ACOT2P49753 483 aa15.35■□□□□ 0.05
CLCN4-201ENST00000380829 MRPS25P82663 173 aaKnown RBP15.35■□□□□ 0.05
CLCN4-201ENST00000380829 ACTN3Q08043 901 aaPredicted RBP15.35■□□□□ 0.05
CLCN4-201ENST00000380829 TARBP2Q15633 366 aaKnown RBP15.35■□□□□ 0.05
CLCN4-201ENST00000380829 SV2AQ7L0J3 742 aa15.35■□□□□ 0.05
CLCN4-201ENST00000380829 OTUD6BQ8N6M0 293 aa15.35■□□□□ 0.05
CLCN4-201ENST00000380829 SPATA4Q8NEY3 305 aa15.35■□□□□ 0.05
CLCN4-201ENST00000380829 TMC2Q8TDI7 906 aa15.35■□□□□ 0.05
CLCN4-201ENST00000380829 MPHOSPH6Q99547 160 aaKnown RBP15.35■□□□□ 0.05
CLCN4-201ENST00000380829 HAPLN2Q9GZV7 340 aa15.35■□□□□ 0.05
CLCN4-201ENST00000380829 MCM3APO60318 1980 aa15.35■□□□□ 0.05
CLCN4-201ENST00000380829 K7ERI5 159 aa15.34■□□□□ 0.05
CLCN4-201ENST00000380829 EDN1P05305 212 aa15.34■□□□□ 0.05
CLCN4-201ENST00000380829 WNT7BP56706 349 aa15.34■□□□□ 0.05
CLCN4-201ENST00000380829 NLRP11P59045 1033 aaKnown RBP15.34■□□□□ 0.05
CLCN4-201ENST00000380829 FMNL3Q8IVF7 1028 aa15.34■□□□□ 0.05
CLCN4-201ENST00000380829 LRRC57Q8N9N7 239 aa15.34■□□□□ 0.05
CLCN4-201ENST00000380829 FBXL13Q8NEE6 735 aa15.34■□□□□ 0.05
CLCN4-201ENST00000380829 TPCN2Q8NHX9 752 aa15.34■□□□□ 0.05
CLCN4-201ENST00000380829 FAXDC2Q96IV6 333 aa15.34■□□□□ 0.05
CLCN4-201ENST00000380829 GPR20Q99678 358 aa15.34■□□□□ 0.05
CLCN4-201ENST00000380829 AGPAT1Q99943 283 aa15.34■□□□□ 0.05
CLCN4-201ENST00000380829 CENPHQ9H3R5 247 aa15.34■□□□□ 0.05
CLCN4-201ENST00000380829 OSGEPQ9NPF4 335 aa15.34■□□□□ 0.05
CLCN4-201ENST00000380829 PDGFCQ9NRA1 345 aa15.34■□□□□ 0.05
CLCN4-201ENST00000380829 ANKFY1Q9P2R3 1169 aa15.34■□□□□ 0.05
CLCN4-201ENST00000380829 PCNTO95613 3336 aa15.34■□□□□ 0.05
CLCN4-201ENST00000380829 ZNF233A6NK53 670 aa15.34■□□□□ 0.05
CLCN4-201ENST00000380829 KIAA0754O94854 1291 aa15.34■□□□□ 0.05
CLCN4-201ENST00000380829 COPB2P35606 906 aa15.34■□□□□ 0.05
CLCN4-201ENST00000380829 RFC5P40937 340 aa15.34■□□□□ 0.05
CLCN4-201ENST00000380829 PAFAH1B1P43034 410 aa15.34■□□□□ 0.05
CLCN4-201ENST00000380829 ATP1A2P50993 1020 aa15.34■□□□□ 0.05
CLCN4-201ENST00000380829 MCCD1P59942 119 aaPredicted RBP15.34■□□□□ 0.05
CLCN4-201ENST00000380829 RNASE9P60153 205 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms