RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 PRMT7Q9NVM4 692 aaPredicted RBP25.58■■□□□ 1.69
U2AF1-202ENST00000380276 FNIP2Q9P278 1114 aa25.58■■□□□ 1.69
U2AF1-202ENST00000380276 WNT16Q9UBV4 365 aa25.58■■□□□ 1.69
U2AF1-202ENST00000380276 A0A1B0GUA9 196 aa25.57■■□□□ 1.68
U2AF1-202ENST00000380276 KRBA1A5PL33 1030 aa25.57■■□□□ 1.68
U2AF1-202ENST00000380276 WNT7AO00755 349 aa25.57■■□□□ 1.68
U2AF1-202ENST00000380276 ME3Q16798 604 aa25.57■■□□□ 1.68
U2AF1-202ENST00000380276 GTF3C6Q969F1 213 aa25.57■■□□□ 1.68
U2AF1-202ENST00000380276 RHOBTB2Q9BYZ6 727 aa25.57■■□□□ 1.68
U2AF1-202ENST00000380276 PRKD2Q9BZL6 878 aa25.57■■□□□ 1.68
U2AF1-202ENST00000380276 ZFHX2Q9C0A1 2572 aaPredicted RBP25.57■■□□□ 1.68
U2AF1-202ENST00000380276 SRFP11831 508 aa25.56■■□□□ 1.68
U2AF1-202ENST00000380276 MCM7P33993 719 aa25.56■■□□□ 1.68
U2AF1-202ENST00000380276 SPECC1Q5M775 1068 aa25.56■■□□□ 1.68
U2AF1-202ENST00000380276 RTP2Q5QGT7 225 aa25.56■■□□□ 1.68
U2AF1-202ENST00000380276 ADSSL1Q8N142 457 aa25.56■■□□□ 1.68
U2AF1-202ENST00000380276 MCPH1Q8NEM0 835 aa25.56■■□□□ 1.68
U2AF1-202ENST00000380276 KCNG4Q8TDN1 519 aa25.56■■□□□ 1.68
U2AF1-202ENST00000380276 GPR152Q8TDT2 470 aa25.56■■□□□ 1.68
U2AF1-202ENST00000380276 NXPE3Q969Y0 559 aa25.56■■□□□ 1.68
U2AF1-202ENST00000380276 PAAF1Q9BRP4 392 aa25.56■■□□□ 1.68
U2AF1-202ENST00000380276 TBC1D17Q9HA65 648 aa25.56■■□□□ 1.68
U2AF1-202ENST00000380276 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.56■■□□□ 1.68
U2AF1-202ENST00000380276 JAK2O60674 1132 aa25.55■■□□□ 1.68
U2AF1-202ENST00000380276 TUSC3Q13454 348 aa25.55■■□□□ 1.68
U2AF1-202ENST00000380276 LIN9Q5TKA1 542 aa25.55■■□□□ 1.68
U2AF1-202ENST00000380276 FAM171A1Q5VUB5 890 aa25.55■■□□□ 1.68
U2AF1-202ENST00000380276 NSUN7Q8NE18 718 aaKnown RBP25.55■■□□□ 1.68
U2AF1-202ENST00000380276 PRIMPOLQ96LW4 560 aa25.55■■□□□ 1.68
U2AF1-202ENST00000380276 SNTG2Q9NY99 539 aa25.55■■□□□ 1.68
U2AF1-202ENST00000380276 POLIQ9UNA4 740 aa25.55■■□□□ 1.68
U2AF1-202ENST00000380276 MTCL1Q9Y4B5 1905 aaKnown RBP25.55■■□□□ 1.68
U2AF1-202ENST00000380276 N4BP3O15049 544 aa25.54■■□□□ 1.68
U2AF1-202ENST00000380276 ZMYND10O75800 440 aa25.54■■□□□ 1.68
U2AF1-202ENST00000380276 LAMP2P13473 410 aa25.54■■□□□ 1.68
U2AF1-202ENST00000380276 FSHRP23945 695 aa25.54■■□□□ 1.68
U2AF1-202ENST00000380276 ANAPC15P60006 121 aa25.54■■□□□ 1.68
U2AF1-202ENST00000380276 MTMR9Q96QG7 549 aa25.54■■□□□ 1.68
U2AF1-202ENST00000380276 TTPALQ9BTX7 342 aa25.54■■□□□ 1.68
U2AF1-202ENST00000380276 C2orf40Q9H1Z8 148 aa25.54■■□□□ 1.68
U2AF1-202ENST00000380276 TMEM60Q9H2L4 133 aa25.54■■□□□ 1.68
U2AF1-202ENST00000380276 TUFT1Q9NNX1 390 aa25.54■■□□□ 1.68
U2AF1-202ENST00000380276 ZMYM2Q9UBW7 1377 aa25.54■■□□□ 1.68
U2AF1-202ENST00000380276 KIF4AO95239 1232 aa25.53■■□□□ 1.68
U2AF1-202ENST00000380276 THP07101 528 aa25.53■■□□□ 1.68
U2AF1-202ENST00000380276 XRCC6P12956 609 aaKnown RBP eCLIP25.53■■□□□ 1.68
U2AF1-202ENST00000380276 GUCY1B3Q02153 619 aa25.53■■□□□ 1.68
U2AF1-202ENST00000380276 PRPF4BQ13523 1007 aaKnown RBP25.53■■□□□ 1.68
U2AF1-202ENST00000380276 PSMD5Q16401 504 aa25.53■■□□□ 1.68
U2AF1-202ENST00000380276 LILRA6Q6PI73 481 aa25.53■■□□□ 1.68
U2AF1-202ENST00000380276 GRASPQ7Z6J2 395 aaPredicted RBP25.53■■□□□ 1.68
U2AF1-202ENST00000380276 CATSPER3Q86XQ3 398 aa25.53■■□□□ 1.68
U2AF1-202ENST00000380276 GPR65Q8IYL9 337 aa25.53■■□□□ 1.68
U2AF1-202ENST00000380276 DEPTORQ8TB45 409 aa25.53■■□□□ 1.68
U2AF1-202ENST00000380276 ADPGKQ9BRR6 497 aa25.53■■□□□ 1.68
U2AF1-202ENST00000380276 PDZD7Q9H5P4 517 aa25.53■■□□□ 1.68
U2AF1-202ENST00000380276 USP20Q9Y2K6 914 aa25.53■■□□□ 1.68
U2AF1-202ENST00000380276 NUMBLQ9Y6R0 609 aa25.53■■□□□ 1.68
U2AF1-202ENST00000380276 ARHGEF35A5YM69 484 aa25.52■■□□□ 1.68
U2AF1-202ENST00000380276 MED24O75448 989 aa25.52■■□□□ 1.68
U2AF1-202ENST00000380276 RECQL4O94761 1208 aa25.52■■□□□ 1.68
U2AF1-202ENST00000380276 C1RP00736 705 aa25.52■■□□□ 1.68
U2AF1-202ENST00000380276 PRKCBP05771 671 aa25.52■■□□□ 1.68
U2AF1-202ENST00000380276 SPATA31C1P0DKV0 1188 aa25.52■■□□□ 1.68
U2AF1-202ENST00000380276 SAFBQ15424 915 aaKnown RBP eCLIP25.52■■□□□ 1.68
U2AF1-202ENST00000380276 MAPK6Q16659 721 aa25.52■■□□□ 1.68
U2AF1-202ENST00000380276 PPM1LQ5SGD2 360 aa25.52■■□□□ 1.68
U2AF1-202ENST00000380276 NOSTRINQ8IVI9 506 aa25.52■■□□□ 1.68
U2AF1-202ENST00000380276 NACC1Q96RE7 527 aa25.52■■□□□ 1.68
U2AF1-202ENST00000380276 ARHGEF3Q9NR81 526 aa25.52■■□□□ 1.68
U2AF1-202ENST00000380276 FBXW11Q9UKB1 542 aa25.52■■□□□ 1.68
U2AF1-202ENST00000380276 MYO15AQ9UKN7 3530 aa25.51■■□□□ 1.68
U2AF1-202ENST00000380276 TTLL13PA6NNM8 815 aa25.51■■□□□ 1.67
U2AF1-202ENST00000380276 C8AP07357 584 aa25.51■■□□□ 1.67
U2AF1-202ENST00000380276 DCNP07585 359 aaKnown RBP25.51■■□□□ 1.67
U2AF1-202ENST00000380276 NTHL1P78549 312 aa25.51■■□□□ 1.67
U2AF1-202ENST00000380276 CDCA2Q69YH5 1023 aaPredicted RBP25.51■■□□□ 1.67
U2AF1-202ENST00000380276 POTEGQ6S5H5 508 aa25.51■■□□□ 1.67
U2AF1-202ENST00000380276 ERMNQ8TAM6 284 aa25.51■■□□□ 1.67
U2AF1-202ENST00000380276 FZD8Q9H461 694 aa25.51■■□□□ 1.67
U2AF1-202ENST00000380276 GDAQ9Y2T3 454 aa25.51■■□□□ 1.67
U2AF1-202ENST00000380276 PTGESO14684 152 aa25.5■■□□□ 1.67
U2AF1-202ENST00000380276 CCL16O15467 120 aa25.5■■□□□ 1.67
U2AF1-202ENST00000380276 HTR4Q13639 388 aa25.5■■□□□ 1.67
U2AF1-202ENST00000380276 DCLRE1AQ6PJP8 1040 aa25.5■■□□□ 1.67
U2AF1-202ENST00000380276 PADI6Q6TGC4 694 aa25.5■■□□□ 1.67
U2AF1-202ENST00000380276 PIK3R5Q8WYR1 880 aa25.5■■□□□ 1.67
U2AF1-202ENST00000380276 BSNDQ8WZ55 320 aa25.5■■□□□ 1.67
U2AF1-202ENST00000380276 NEK4P51957 841 aa25.49■■□□□ 1.67
U2AF1-202ENST00000380276 ELAVL2Q12926 359 aaKnown RBP25.49■■□□□ 1.67
U2AF1-202ENST00000380276 FAM187BQ17R55 369 aa25.49■■□□□ 1.67
U2AF1-202ENST00000380276 LNX1Q8TBB1 728 aaPredicted RBP25.49■■□□□ 1.67
U2AF1-202ENST00000380276 CLSTN3Q9BQT9 956 aa25.49■■□□□ 1.67
U2AF1-202ENST00000380276 CXCL16Q9H2A7 254 aa25.49■■□□□ 1.67
U2AF1-202ENST00000380276 SIT1Q9Y3P8 196 aa25.49■■□□□ 1.67
U2AF1-202ENST00000380276 R4GN57 208 aa25.49■■□□□ 1.67
U2AF1-202ENST00000380276 DOCK8Q8NF50 2099 aa25.49■■□□□ 1.67
U2AF1-202ENST00000380276 ANHXE9PGG2 379 aa25.48■■□□□ 1.67
U2AF1-202ENST00000380276 XYLBO75191 536 aa25.48■■□□□ 1.67
U2AF1-202ENST00000380276 HNRNPA1P09651 372 aaKnown RBP eCLIP25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms