RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 TXLNGYQ9BZA5 131 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 TLE6Q9H808 572 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 THEGQ9P2T0 379 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 DCTN4Q9UJW0 460 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 RTCBQ9Y3I0 505 aaKnown RBP9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 NCAPD2Q15021 1401 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 ARAP3Q8WWN8 1544 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 C15orf38-AP3S2A0A0A6YYH1 394 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 A0A1W2PQJ5 194 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 TTC34A8MYJ7 566 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 ZWINTO95229 277 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 KRT13P13646 458 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 UQCRBP14927 111 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 ATP5DP30049 168 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 GSSP48637 474 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 SLC9C1Q4G0N8 1177 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 SPDYCQ5MJ68 293 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 BTNL9Q6UXG8 535 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 FASTKD5Q7L8L6 764 aaKnown RBP9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 NLRP9Q7RTR0 991 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 ARPINQ7Z6K5 226 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 PASD1Q8IV76 773 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 SLC25A41Q8N5S1 370 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 KBTBD3Q8NAB2 608 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 DBNDD2Q9BQY9 259 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 ERP44Q9BS26 406 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 CRNKL1Q9BZJ0 848 aaKnown RBP9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 SIAEQ9HAT2 523 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 HACD3Q9P035 362 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 ARPP21Q9UBL0 812 aaPredicted RBP9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 ATP6V0A2Q9Y487 856 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 AK5Q9Y6K8 562 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 K7EPI3 171 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 ZBTB43O43298 467 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 SPAG7O75391 227 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 ZBTB11O95625 1053 aaPredicted RBP9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 CHEK2O96017 543 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 FGGP02679 453 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 CETN2P41208 172 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 CPA2P48052 419 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 ANTXR2P58335 489 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 ZNF174Q15697 407 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 MAP3K21Q5TCX8 1036 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 LPCAT4Q643R3 524 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 PEX26Q7Z412 305 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 LRRC49Q8IUZ0 686 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 PDZD8Q8NEN9 1154 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 TANGO6Q9C0B7 1094 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 GLT8D2Q9H1C3 349 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 ARL8BQ9NVJ2 186 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 UVRAGQ9P2Y5 699 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 ARMCX3Q9UH62 379 aaPredicted RBP9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 ASAP1Q9ULH1 1129 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 ZBTB1Q9Y2K1 713 aa9.03□□□□□ -0.96
NHLRC3-201ENST00000379599 FAM205CA6NFA0 338 aa9.02□□□□□ -0.96
NHLRC3-201ENST00000379599 RNF113AO15541 343 aaKnown RBP9.02□□□□□ -0.96
NHLRC3-201ENST00000379599 FOXD2O60548 495 aaPredicted RBP9.02□□□□□ -0.96
NHLRC3-201ENST00000379599 MMP1P03956 469 aa9.02□□□□□ -0.96
NHLRC3-201ENST00000379599 CHRNB1P11230 501 aa9.02□□□□□ -0.96
NHLRC3-201ENST00000379599 IL4RP24394 825 aa9.02□□□□□ -0.96
NHLRC3-201ENST00000379599 GNA11P29992 359 aa9.02□□□□□ -0.96
NHLRC3-201ENST00000379599 GUCY1A2P33402 732 aa9.02□□□□□ -0.96
NHLRC3-201ENST00000379599 PPARGP37231 505 aaPredicted RBP9.02□□□□□ -0.96
NHLRC3-201ENST00000379599 KRT81Q14533 505 aa9.02□□□□□ -0.96
NHLRC3-201ENST00000379599 SF3B4Q15427 424 aaKnown RBP eCLIP9.02□□□□□ -0.96
NHLRC3-201ENST00000379599 SFT2D3Q587I9 215 aa9.02□□□□□ -0.96
NHLRC3-201ENST00000379599 IYDQ6PHW0 289 aa9.02□□□□□ -0.96
NHLRC3-201ENST00000379599 RFPL4BQ6ZWI9 263 aa9.02□□□□□ -0.96
NHLRC3-201ENST00000379599 LRRC6Q86X45 466 aa9.02□□□□□ -0.96
NHLRC3-201ENST00000379599 METTL25Q8N6Q8 603 aa9.02□□□□□ -0.96
NHLRC3-201ENST00000379599 NEUROD6Q96NK8 337 aa9.02□□□□□ -0.96
NHLRC3-201ENST00000379599 ANKRD2Q9GZV1 360 aa9.02□□□□□ -0.96
NHLRC3-201ENST00000379599 IRF2BPLQ9H1B7 796 aa9.02□□□□□ -0.96
NHLRC3-201ENST00000379599 CLK4Q9HAZ1 481 aaKnown RBP9.02□□□□□ -0.96
NHLRC3-201ENST00000379599 NPHS2Q9NP85 383 aa9.02□□□□□ -0.96
NHLRC3-201ENST00000379599 QPCTLQ9NXS2 382 aa9.02□□□□□ -0.96
NHLRC3-201ENST00000379599 CNOT7Q9UIV1 285 aaKnown RBP9.02□□□□□ -0.96
NHLRC3-201ENST00000379599 A6NL46 340 aa9.02□□□□□ -0.97
NHLRC3-201ENST00000379599 RIPK2O43353 540 aa9.02□□□□□ -0.97
NHLRC3-201ENST00000379599 TRPA1O75762 1119 aa9.02□□□□□ -0.97
NHLRC3-201ENST00000379599 UBL4AP11441 157 aa9.02□□□□□ -0.97
NHLRC3-201ENST00000379599 CPA3P15088 417 aa9.02□□□□□ -0.97
NHLRC3-201ENST00000379599 SERPINB6P35237 376 aa9.02□□□□□ -0.97
NHLRC3-201ENST00000379599 HIRAP54198 1017 aaPredicted RBP9.02□□□□□ -0.97
NHLRC3-201ENST00000379599 DCAF6Q58WW2 860 aa9.02□□□□□ -0.97
NHLRC3-201ENST00000379599 CLNKQ7Z7G1 428 aa9.02□□□□□ -0.97
NHLRC3-201ENST00000379599 SPERTQ8NA61 448 aa9.02□□□□□ -0.97
NHLRC3-201ENST00000379599 OLFML3Q9NRN5 406 aa9.02□□□□□ -0.97
NHLRC3-201ENST00000379599 GIN1Q9NXP7 522 aa9.02□□□□□ -0.97
NHLRC3-201ENST00000379599 ADAMTS1Q9UHI8 967 aa9.02□□□□□ -0.97
NHLRC3-201ENST00000379599 APPL1Q9UKG1 709 aa9.02□□□□□ -0.97
NHLRC3-201ENST00000379599 PPM1HQ9ULR3 514 aa9.02□□□□□ -0.97
NHLRC3-201ENST00000379599 STARD13Q9Y3M8 1113 aa9.02□□□□□ -0.97
NHLRC3-201ENST00000379599 ADGRB3O60242 1522 aa9.02□□□□□ -0.97
NHLRC3-201ENST00000379599 RPTORQ8N122 1335 aa9.02□□□□□ -0.97
NHLRC3-201ENST00000379599 STK36Q9NRP7 1315 aa9.02□□□□□ -0.97
NHLRC3-201ENST00000379599 KLRF2D3W0D1 207 aa9.02□□□□□ -0.97
NHLRC3-201ENST00000379599 HNRNPCL1O60812 293 aaKnown RBP9.02□□□□□ -0.97
NHLRC3-201ENST00000379599 HNRNPH3P31942 346 aaKnown RBP9.02□□□□□ -0.97
NHLRC3-201ENST00000379599 HSD17B4P51659 736 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms