RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ASCC2Q9H1I8 757 aaPredicted RBP11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 ISCUQ9H1K1 167 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 TMEM134Q9H6X4 195 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 MED4Q9NPJ6 270 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 AMFRQ9UKV5 643 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 STXBP5LQ9Y2K9 1186 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 CUL9Q8IWT3 2517 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 GSTTP1A0A1W2PQM5 241 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 H0YGN5 161 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 CCDC188H7C350 402 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 KCNK3O14649 394 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 RTN2O75298 545 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 CNMDO75829 334 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 ATP4AP20648 1035 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 EPHB4P54760 987 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 CLDN10P78369 228 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 GCNT1Q02742 428 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 NNTQ13423 1086 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 PSMD6Q15008 389 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 TERF2Q15554 542 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 TARBP2Q15633 366 aaKnown RBP11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 TAS1R3Q7RTX0 852 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 DAAM2Q86T65 1068 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 IFT20Q8IY31 132 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 RASGEF1CQ8N431 466 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 ZSWIM2Q8NEG5 633 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 DEPTORQ8TB45 409 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 MORC4Q8TE76 937 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 SEPT1Q8WYJ6 367 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 OTUD5Q96G74 571 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 PSMB7Q99436 277 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 LRRC1Q9BTT6 524 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 RBM12Q9NTZ6 932 aaKnown RBP11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 RNF216Q9NWF9 866 aaPredicted RBP11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 RAB20Q9NX57 234 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 TMEM59LQ9UK28 342 aa11.29□□□□□ -0.6
POLR2J3-201ENST00000379340 UNCXA6NJT0 531 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 PGRMC1O00264 195 aaKnown RBP11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 LRRN2O75325 713 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 STAT5BP51692 787 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 DMTNQ08495 405 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 HSP90B2PQ58FF3 399 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 C11orf63Q6NUN7 778 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 EMBQ6PCB8 327 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 ARMC9Q7Z3E5 817 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 NT5DC3Q86UY8 548 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 PPM1KQ8N3J5 372 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 EIF1ADQ8N9N8 165 aaKnown RBP11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 SHCBP1Q8NEM2 672 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 SLC35G2Q8TBE7 412 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 FAM71BQ8TC56 605 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 AENQ8WTP8 325 aaKnown RBP11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 TCP11Q8WWU5 503 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 DHX38Q92620 1227 aaKnown RBP11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 CCDC127Q96BQ5 260 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 HES6Q96HZ4 224 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 CEP89Q96ST8 783 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 PAGR1Q9BTK6 254 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 MROH8Q9H579 483 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 AZI2Q9H6S1 392 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 SEPT11Q9NVA2 429 aaKnown RBP11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 TTC7AQ9ULT0 858 aaPredicted RBP11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 BRCA2P51587 3418 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 TMCO5BA8MYB1 307 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 MIF4GDA9UHW6 222 aaKnown RBP11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 K7ERI5 159 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 MAFO75444 373 aaPredicted RBP11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 LGR5O75473 907 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 MTA2O94776 668 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 GGPS1O95749 300 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 ZBTB48P10074 688 aaPredicted RBP11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 GLRA2P23416 452 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 GJA5P36382 358 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 MATR3P43243 847 aaKnown RBP eCLIP11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 TNNT3P45378 269 aaPredicted RBP11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 AARSP49588 968 aaKnown RBP eCLIP11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 PDE6CP51160 858 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 EFNA5P52803 228 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 CRHR2Q13324 411 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 KCTD2Q14681 263 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 PPP2R5EQ16537 467 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 C15orf39Q6ZRI6 1047 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 SV2AQ7L0J3 742 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 RPUSD2Q8IZ73 545 aaKnown RBP11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 HELQQ8TDG4 1101 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 ASAP3Q8TDY4 903 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 EPS8L1Q8TE68 723 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 PSPC1Q8WXF1 523 aaKnown RBP11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 BBXQ8WY36 941 aaPredicted RBP11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 MS4A14Q96JA4 679 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 KREMEN1Q96MU8 473 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 FNBP1Q96RU3 617 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 NAP1L3Q99457 506 aaPredicted RBP11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 JPH2Q9BR39 696 aaPredicted RBP11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 C1orf112Q9NSG2 853 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 EHD2Q9NZN4 543 aa11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 NOCTQ9UK39 431 aaKnown RBP11.28□□□□□ -0.6
POLR2J3-201ENST00000379340 AGO2Q9UKV8 859 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms