RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 CENPPQ6IPU0 288 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 KCNV1Q6PIU1 500 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 MOXD1Q6UVY6 613 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 SPATA33Q96N06 139 aa11.98□□□□□ -0.49
RPGR-203ENST00000378505 G3BP2Q9UN86 482 aaKnown RBP11.98□□□□□ -0.49
RPGR-203ENST00000378505 TCRBV5S4A2TA0A5A2 114 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 SPECC1L-ADORA2AF8WAN1 911 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 MEFVO15553 781 aaPredicted RBP11.97□□□□□ -0.49
RPGR-203ENST00000378505 H2AFXP16104 143 aaPredicted RBP11.97□□□□□ -0.49
RPGR-203ENST00000378505 FGFR4P22455 802 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 CDH6P55285 790 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 ROR1Q01973 937 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 MTMR2Q13614 643 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 PKN1Q16512 942 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 HP1BP3Q5SSJ5 553 aaPredicted RBP11.97□□□□□ -0.49
RPGR-203ENST00000378505 HEATR6Q6AI08 1181 aaKnown RBP11.97□□□□□ -0.49
RPGR-203ENST00000378505 C18orf8Q96DM3 657 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 CCT8L2Q96SF2 557 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 ZFP69BQ9UJL9 534 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 APOBEC2Q9Y235 224 aaKnown RBP11.97□□□□□ -0.49
RPGR-203ENST00000378505 MAFGO15525 162 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 HAUS5O94927 633 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 GNAT1P11488 350 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 HSPA9P38646 679 aaKnown RBP11.97□□□□□ -0.49
RPGR-203ENST00000378505 CDK17Q00537 523 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 KLC3Q6P597 504 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 RCOR2Q8IZ40 523 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 ZNF668Q96K58 619 aaPredicted RBP11.97□□□□□ -0.49
RPGR-203ENST00000378505 WDR35Q9P2L0 1181 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 ANGPTL3Q9Y5C1 460 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 PPLO60437 1756 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 A0A087X0T9 212 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 CFAP73A6NFT4 308 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 FAM228BP0C875 321 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 ACOT2P49753 483 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 WDR72Q3MJ13 1102 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 ANKRD20A4Q4UJ75 823 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 ANKRD20A8PQ5CZ79 823 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 ANKRD20A2Q5SQ80 823 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 ANKRD20A1Q5TYW2 823 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 TWF2Q6IBS0 349 aaKnown RBP11.97□□□□□ -0.49
RPGR-203ENST00000378505 TRAPPC11Q7Z392 1133 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 SRLQ86TD4 932 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.97□□□□□ -0.49
RPGR-203ENST00000378505 TTC1Q99614 292 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 NAGPAQ9UK23 515 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 TMEM131LA2VDJ0 1609 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 PRKCBP05771 671 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 MX2P20592 715 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 COG7P83436 770 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 HIF1AQ16665 826 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 KYAT1Q16773 422 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 RWDD4Q6NW29 188 aaKnown RBP11.97□□□□□ -0.49
RPGR-203ENST00000378505 WDR93Q6P2C0 686 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 JAMLQ86YT9 394 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 CDKL3Q8IVW4 592 aaPredicted RBP11.97□□□□□ -0.49
RPGR-203ENST00000378505 ZNF710Q8N1W2 664 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 ISCUQ9H1K1 167 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 CARD9Q9H257 536 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 ETNK1Q9HBU6 452 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 BFARQ9NZS9 450 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 DCTN4Q9UJW0 460 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 TFR2Q9UP52 801 aa11.97□□□□□ -0.49
RPGR-203ENST00000378505 PLEKP08567 350 aaPredicted RBP11.96□□□□□ -0.49
RPGR-203ENST00000378505 PRLRP16471 622 aa11.96□□□□□ -0.49
RPGR-203ENST00000378505 MDM2Q00987 491 aaPredicted RBP11.96□□□□□ -0.49
RPGR-203ENST00000378505 RBM46Q8TBY0 533 aaKnown RBP11.96□□□□□ -0.49
RPGR-203ENST00000378505 SKA2Q8WVK7 121 aaPredicted RBP11.96□□□□□ -0.49
RPGR-203ENST00000378505 ERP44Q9BS26 406 aa11.96□□□□□ -0.49
RPGR-203ENST00000378505 BEGAINQ9BUH8 593 aa11.96□□□□□ -0.49
RPGR-203ENST00000378505 FOXP3Q9BZS1 431 aa11.96□□□□□ -0.49
RPGR-203ENST00000378505 TMEM8AQ9HCN3 771 aa11.96□□□□□ -0.49
RPGR-203ENST00000378505 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.96□□□□□ -0.49
RPGR-203ENST00000378505 DEPDC5O75140 1603 aa11.96□□□□□ -0.49
RPGR-203ENST00000378505 C19orf81C9J6K1 198 aa11.96□□□□□ -0.49
RPGR-203ENST00000378505 SMIM24O75264 130 aa11.96□□□□□ -0.49
RPGR-203ENST00000378505 COMTP21964 271 aa11.96□□□□□ -0.49
RPGR-203ENST00000378505 ARFIP2P53365 341 aa11.96□□□□□ -0.49
RPGR-203ENST00000378505 NCOA4Q13772 614 aa11.96□□□□□ -0.49
RPGR-203ENST00000378505 AGBL2Q5U5Z8 902 aa11.96□□□□□ -0.49
RPGR-203ENST00000378505 ANKEF1Q9NU02 776 aa11.96□□□□□ -0.49
RPGR-203ENST00000378505 STOML1Q9UBI4 398 aa11.96□□□□□ -0.49
RPGR-203ENST00000378505 FIS1Q9Y3D6 152 aa11.96□□□□□ -0.49
RPGR-203ENST00000378505 KPNA7A9QM74 516 aa11.96□□□□□ -0.5
RPGR-203ENST00000378505 MSH4O15457 936 aa11.96□□□□□ -0.5
RPGR-203ENST00000378505 CFLARO15519 480 aa11.96□□□□□ -0.5
RPGR-203ENST00000378505 ZFXP17010 805 aaPredicted RBP11.96□□□□□ -0.5
RPGR-203ENST00000378505 DRP2Q13474 957 aa11.96□□□□□ -0.5
RPGR-203ENST00000378505 XRRA1Q6P2D8 792 aa11.96□□□□□ -0.5
RPGR-203ENST00000378505 RSBN1LQ6PCB5 846 aaPredicted RBP11.96□□□□□ -0.5
RPGR-203ENST00000378505 MYLK4Q86YV6 388 aaPredicted RBP11.96□□□□□ -0.5
RPGR-203ENST00000378505 SEPT1Q8WYJ6 367 aa11.96□□□□□ -0.5
RPGR-203ENST00000378505 TMEM143Q96AN5 459 aa11.96□□□□□ -0.5
RPGR-203ENST00000378505 ZIM3Q96PE6 472 aa11.96□□□□□ -0.5
RPGR-203ENST00000378505 VPS11Q9H270 941 aa11.96□□□□□ -0.5
RPGR-203ENST00000378505 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.96□□□□□ -0.5
RPGR-203ENST00000378505 PMLP29590 882 aa11.95□□□□□ -0.5
RPGR-203ENST00000378505 IRAK1P51617 712 aa11.95□□□□□ -0.5
RPGR-203ENST00000378505 MXD4Q14582 209 aaPredicted RBP11.95□□□□□ -0.5
RPGR-203ENST00000378505 TKFCQ3LXA3 575 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms