RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 ALKBH5Q6P6C2 394 aaKnown RBP17.25■□□□□ 0.35
RGP1-201ENST00000378078 MTBPQ96DY7 904 aa17.25■□□□□ 0.35
RGP1-201ENST00000378078 ECT2Q9H8V3 914 aa17.25■□□□□ 0.35
RGP1-201ENST00000378078 FUT11Q495W5 492 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 FAM81BQ96LP2 452 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 COA1Q9GZY4 146 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 FAM49BQ9NUQ9 324 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 MAP3K13O43283 966 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 LARGE1O95461 756 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 FTLP02792 175 aaPredicted RBP17.24■□□□□ 0.35
RGP1-201ENST00000378078 TAF1CQ15572 869 aaPredicted RBP17.24■□□□□ 0.35
RGP1-201ENST00000378078 CACUL1Q86Y37 369 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 ARMC2Q8NEN0 867 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 UBE2Q2Q8WVN8 375 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 MAGEF1Q9HAY2 307 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 KRT37O76014 449 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 TRIM49P0CI25 452 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 TRIM49CP0CI26 452 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 COASYQ13057 564 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 NCAPHQ15003 741 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 C6orf118Q5T5N4 469 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 CENPTQ96BT3 561 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 ABCB6Q9NP58 842 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 ATP10BO94823 1461 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 ATN1P54259 1190 aaPredicted RBP17.24■□□□□ 0.35
RGP1-201ENST00000378078 TRIM32Q13049 653 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 CYB5R4Q7L1T6 521 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 OXER1Q8TDS5 423 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 HPS3Q969F9 1004 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 PARD6BQ9BYG5 372 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 LATS2Q9NRM7 1088 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 MID2Q9UJV3 735 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 ITIH6Q6UXX5 1313 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 NCF1BA6NI72 391 aaPredicted RBP17.24■□□□□ 0.35
RGP1-201ENST00000378078 NCF1CA8MVU1 366 aaPredicted RBP17.24■□□□□ 0.35
RGP1-201ENST00000378078 FKBP9O95302 570 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 PYGBP11216 843 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 NCF1P14598 390 aaPredicted RBP17.24■□□□□ 0.35
RGP1-201ENST00000378078 ARID5BQ14865 1188 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 FKBP9P1Q75LS8 142 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 DCAF4Q8WV16 495 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 FOPNLQ96NB1 174 aa17.24■□□□□ 0.35
RGP1-201ENST00000378078 IL6STP40189 918 aaPredicted RBP17.23■□□□□ 0.35
RGP1-201ENST00000378078 FAM162AQ96A26 154 aa17.23■□□□□ 0.35
RGP1-201ENST00000378078 KLK14Q9P0G3 267 aa17.23■□□□□ 0.35
RGP1-201ENST00000378078 HMGB1P1B2RPK0 211 aaPredicted RBP17.23■□□□□ 0.35
RGP1-201ENST00000378078 LTKP29376 864 aa17.23■□□□□ 0.35
RGP1-201ENST00000378078 GPC5P78333 572 aa17.23■□□□□ 0.35
RGP1-201ENST00000378078 KIF23Q02241 960 aaPredicted RBP17.23■□□□□ 0.35
RGP1-201ENST00000378078 STX19Q8N4C7 294 aa17.23■□□□□ 0.35
RGP1-201ENST00000378078 UBA3Q8TBC4 463 aa17.23■□□□□ 0.35
RGP1-201ENST00000378078 HASPINQ8TF76 798 aa17.23■□□□□ 0.35
RGP1-201ENST00000378078 H2AFY2Q9P0M6 372 aaPredicted RBP17.23■□□□□ 0.35
RGP1-201ENST00000378078 ETF1P62495 437 aaKnown RBP17.23■□□□□ 0.35
RGP1-201ENST00000378078 MMS22LQ6ZRQ5 1243 aa17.23■□□□□ 0.35
RGP1-201ENST00000378078 TEX9Q8N6V9 391 aa17.23■□□□□ 0.35
RGP1-201ENST00000378078 OR9Q1Q8NGQ5 310 aa17.23■□□□□ 0.35
RGP1-201ENST00000378078 RBM41Q96IZ5 413 aaKnown RBP17.23■□□□□ 0.35
RGP1-201ENST00000378078 IGFLR1Q9H665 355 aa17.23■□□□□ 0.35
RGP1-201ENST00000378078 MAGOHP61326 146 aaKnown RBP17.23■□□□□ 0.35
RGP1-201ENST00000378078 ZMYM4Q5VZL5 1548 aa17.23■□□□□ 0.35
RGP1-201ENST00000378078 CTTNBP2Q8WZ74 1663 aa17.23■□□□□ 0.35
RGP1-201ENST00000378078 ESYT3A0FGR9 886 aa17.23■□□□□ 0.35
RGP1-201ENST00000378078 WDR47O94967 919 aa17.23■□□□□ 0.35
RGP1-201ENST00000378078 TMEM35BQ8NCS4 154 aa17.23■□□□□ 0.35
RGP1-201ENST00000378078 NSUN6Q8TEA1 469 aaKnown RBP17.23■□□□□ 0.35
RGP1-201ENST00000378078 INTS2Q9H0H0 1204 aaKnown RBP17.23■□□□□ 0.35
RGP1-201ENST00000378078 SLC24A3Q9HC58 644 aa17.23■□□□□ 0.35
RGP1-201ENST00000378078 MARCOQ9UEW3 520 aaPredicted RBP17.23■□□□□ 0.35
RGP1-201ENST00000378078 TYK2P29597 1187 aa17.23■□□□□ 0.35
RGP1-201ENST00000378078 NFRKBQ6P4R8 1299 aa17.23■□□□□ 0.35
RGP1-201ENST00000378078 IFNEQ86WN2 208 aa17.23■□□□□ 0.35
RGP1-201ENST00000378078 APOBEC3FQ8IUX4 373 aaKnown RBP17.23■□□□□ 0.35
RGP1-201ENST00000378078 TSSK1BQ9BXA7 367 aa17.23■□□□□ 0.35
RGP1-201ENST00000378078 PALLDQ8WX93 1383 aa17.23■□□□□ 0.35
RGP1-201ENST00000378078 MCAMP43121 646 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 TOMM20Q15388 145 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 IYDQ6PHW0 289 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 KAT2BQ92831 832 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 BRIP1Q9BX63 1249 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 CYP26B1Q9NR63 512 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.22■□□□□ 0.35
RGP1-201ENST00000378078 LSM7Q9UK45 103 aaKnown RBP17.22■□□□□ 0.35
RGP1-201ENST00000378078 ZBTB5O15062 677 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 DARSP14868 501 aaKnown RBP17.22■□□□□ 0.35
RGP1-201ENST00000378078 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.22■□□□□ 0.35
RGP1-201ENST00000378078 COG1Q8WTW3 980 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 TGS1Q96RS0 853 aaKnown RBP17.22■□□□□ 0.35
RGP1-201ENST00000378078 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.22■□□□□ 0.35
RGP1-201ENST00000378078 AFF2P51816 1311 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 ARSEP51690 589 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 C6orf10Q5SRN2 563 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 ERAP2Q6P179 960 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 ZNF280CQ8ND82 737 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 BRD8Q9H0E9 1235 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 YY1AP1Q9H869 796 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 KDSRQ06136 332 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 CDC16Q13042 620 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 TMC4Q7Z404 712 aa17.22■□□□□ 0.35
RGP1-201ENST00000378078 HDAC6Q9UBN7 1215 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms