RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 ASTN1O14525 1302 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 KAT6AQ92794 2004 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 MYH3P11055 1940 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 ZNF536O15090 1300 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 TRPA1O75762 1119 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 HLA-DRAP01903 254 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 RPS12P25398 132 aaKnown RBP8.7□□□□□ -1.02
CKAP2-203ENST00000378037 MARCKSL1P49006 195 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 MFAP3P55082 362 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 PPFIA1Q13136 1202 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 SEPT7Q16181 437 aaKnown RBP8.7□□□□□ -1.02
CKAP2-203ENST00000378037 ZNF699Q32M78 642 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 XKR3Q5GH77 459 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 C10orf76Q5T2E6 689 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 KRT39Q6A163 491 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 VSIG10LQ86VR7 867 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 TRIM59Q8IWR1 403 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 FBXL13Q8NEE6 735 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 KIF12Q96FN5 646 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 TSGA10Q9BZW7 698 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 APEX2Q9UBZ4 518 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 AGAP1Q9UPQ3 857 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 HEY1Q9Y5J3 304 aa8.7□□□□□ -1.02
CKAP2-203ENST00000378037 I3L4J1 428 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 DAPK3O43293 454 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 ARIH2O95376 493 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 SAT1P21673 171 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 GNA15P30679 374 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 ADCY8P40145 1251 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 CARSP49589 748 aaKnown RBP8.69□□□□□ -1.02
CKAP2-203ENST00000378037 TNNC1P63316 161 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 PPP2R5CQ13362 524 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 IFI16Q16666 785 aaKnown RBP8.69□□□□□ -1.02
CKAP2-203ENST00000378037 SPATA4Q8NEY3 305 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 GPRC5AQ8NFJ5 357 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 OR5B17Q8NGF7 314 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 ARHGEF26Q96DR7 871 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 LBHD1Q9BQE6 289 aaPredicted RBP8.69□□□□□ -1.02
CKAP2-203ENST00000378037 TMEM117Q9H0C3 514 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 RNPEPQ9H4A4 650 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 RPF1Q9H9Y2 349 aaKnown RBP8.69□□□□□ -1.02
CKAP2-203ENST00000378037 TUFT1Q9NNX1 390 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 PIH1D1Q9NWS0 290 aaKnown RBP8.69□□□□□ -1.02
CKAP2-203ENST00000378037 SAE1Q9UBE0 346 aaPredicted RBP8.69□□□□□ -1.02
CKAP2-203ENST00000378037 ZNF214Q9UL59 606 aaPredicted RBP8.69□□□□□ -1.02
CKAP2-203ENST00000378037 FAM184BQ9ULE4 1060 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 PLAGL2Q9UPG8 496 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 C19orf81C9J6K1 198 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 TTI1O43156 1089 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 OATP04181 439 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 ITGB3P05106 788 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 KRT10P13645 584 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 ALDH5A1P51649 535 aaPredicted RBP8.69□□□□□ -1.02
CKAP2-203ENST00000378037 MYL6P60660 151 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 CASP8Q14790 479 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 PHLDB3Q6NSJ2 640 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 CASC4Q6P4E1 433 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 CXCL17Q6UXB2 119 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 CATSPERGQ6ZRH7 1159 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 ZNF365Q70YC5 407 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 HDXQ7Z353 690 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 ZC3H18Q86VM9 953 aaKnown RBP8.69□□□□□ -1.02
CKAP2-203ENST00000378037 TMEM139Q8IV31 216 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 GPR161Q8N6U8 529 aaKnown RBP8.69□□□□□ -1.02
CKAP2-203ENST00000378037 MCPH1Q8NEM0 835 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 CYFIP2Q96F07 1278 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 CDHR1Q96JP9 859 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 RIT2Q99578 217 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 RAB20Q9NX57 234 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 NAGPAQ9UK23 515 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 PHLPP2Q6ZVD8 1323 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.69□□□□□ -1.02
CKAP2-203ENST00000378037 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.69□□□□□ -1.02
CKAP2-203ENST00000378037 PHF20L1A8MW92 1017 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 TLR2O60603 784 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 DGAT1O75907 488 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 FERP16591 822 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 ACAT1P24752 427 aaKnown RBP8.69□□□□□ -1.02
CKAP2-203ENST00000378037 CTNNA1P35221 906 aaKnown RBP8.69□□□□□ -1.02
CKAP2-203ENST00000378037 SOX5P35711 763 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 NCOA4Q13772 614 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 NEDD9Q14511 834 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 SPOUT1Q5T280 376 aaKnown RBP8.69□□□□□ -1.02
CKAP2-203ENST00000378037 ARMCX2Q7L311 632 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 APTXQ7Z2E3 356 aaKnown RBP8.69□□□□□ -1.02
CKAP2-203ENST00000378037 TEX2Q8IWB9 1127 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 GPD1LQ8N335 351 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 SPATA20Q8TB22 786 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 RBM46Q8TBY0 533 aaKnown RBP8.69□□□□□ -1.02
CKAP2-203ENST00000378037 AP5M1Q9H0R1 490 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 GOLGA2P5Q9HBQ8 144 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 JRKLQ9Y4A0 524 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 SNCAIPQ9Y6H5 919 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 SCN9AQ15858 1988 aa8.69□□□□□ -1.02
CKAP2-203ENST00000378037 UMODL1Q5DID0 1318 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 E2F8A0AVK6 867 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 DKC1O60832 514 aaKnown RBP eCLIP8.68□□□□□ -1.02
CKAP2-203ENST00000378037 ATXN8OSP0DMR3 200 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 ELNP15502 786 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 ERFP50548 548 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms