RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 CYP4F22Q6NT55 531 aa15.49■□□□□ 0.07
TCOF1-202ENST00000377797 FRMPD4Q14CM0 1322 aa15.49■□□□□ 0.07
TCOF1-202ENST00000377797 FOXN3O00409 490 aaPredicted RBP15.49■□□□□ 0.07
TCOF1-202ENST00000377797 ARL4AP40617 200 aa15.49■□□□□ 0.07
TCOF1-202ENST00000377797 LY6KQ17RY6 165 aa15.49■□□□□ 0.07
TCOF1-202ENST00000377797 SGSM1Q2NKQ1 1148 aa15.49■□□□□ 0.07
TCOF1-202ENST00000377797 HHATQ5VTY9 493 aa15.49■□□□□ 0.07
TCOF1-202ENST00000377797 RBBP8NLQ8NC74 664 aaPredicted RBP15.49■□□□□ 0.07
TCOF1-202ENST00000377797 ETNPPLQ8TBG4 499 aa15.49■□□□□ 0.07
TCOF1-202ENST00000377797 DNAJC19Q96DA6 116 aa15.49■□□□□ 0.07
TCOF1-202ENST00000377797 CALR3Q96L12 384 aaKnown RBP15.49■□□□□ 0.07
TCOF1-202ENST00000377797 FAN1Q9Y2M0 1017 aa15.49■□□□□ 0.07
TCOF1-202ENST00000377797 ARHGEF37A1IGU5 675 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 USP50Q70EL3 339 aaPredicted RBP15.48■□□□□ 0.07
TCOF1-202ENST00000377797 NAGPAQ9UK23 515 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 PCDHB2Q9Y5E7 798 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 BUB1BO60566 1050 aaPredicted RBP15.48■□□□□ 0.07
TCOF1-202ENST00000377797 PHBP35232 272 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 KYAT1Q16773 422 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 GSPT2Q8IYD1 628 aaKnown RBP15.48■□□□□ 0.07
TCOF1-202ENST00000377797 CPA5Q8WXQ8 436 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 LACRTQ9GZZ8 138 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 DUSP10Q9Y6W6 482 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 RNF40O75150 1001 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 CYP2C8P10632 490 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 CUL1Q13616 776 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 EPC2Q52LR7 807 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 PLEKHH3Q7Z736 793 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 NLGN2Q8NFZ4 835 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 HSPH1Q92598 858 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 KLRG1Q96E93 195 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 NOC2LQ9Y3T9 749 aaKnown RBP15.48■□□□□ 0.07
TCOF1-202ENST00000377797 MORC2Q9Y6X9 1032 aaPredicted RBP15.48■□□□□ 0.07
TCOF1-202ENST00000377797 A8MXQ7 604 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 PDHXO00330 501 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 HOXD10P28358 340 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 KCNA1Q09470 495 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 PPP6R3Q5H9R7 873 aaPredicted RBP15.48■□□□□ 0.07
TCOF1-202ENST00000377797 SPATA20Q8TB22 786 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 RBM41Q96IZ5 413 aaKnown RBP15.48■□□□□ 0.07
TCOF1-202ENST00000377797 EFCC1Q9HA90 598 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 CYP39A1Q9NYL5 469 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 ARHGAP20Q9P2F6 1191 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 PCSK1NQ9UHG2 260 aa15.48■□□□□ 0.07
TCOF1-202ENST00000377797 ARPP19P56211 112 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 CDC42EP1Q00587 391 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 MOB2Q70IA6 237 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 B4GALNT4Q76KP1 1039 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 CCNYQ8ND76 341 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 GIMAP7Q8NHV1 300 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 MS4A14Q96JA4 679 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 GOLPH3Q9H4A6 298 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 PLIN4Q96Q06 1357 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 MYBL1P10243 752 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 C1orf186Q6ZWK4 172 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 TTC39CQ8N584 583 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 RNPC3Q96LT9 517 aaKnown RBP15.47■□□□□ 0.07
TCOF1-202ENST00000377797 WNT8AQ9H1J5 351 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 SNX9Q9Y5X1 595 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 MAD1L1Q9Y6D9 718 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 PODXLO00592 558 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 TJP3O95049 919 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 CASP5P51878 434 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 TMEM132DQ14C87 1099 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 GNASQ5JWF2 1037 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 DARS2Q6PI48 645 aaKnown RBP15.47■□□□□ 0.07
TCOF1-202ENST00000377797 POP1Q99575 1024 aaKnown RBP15.47■□□□□ 0.07
TCOF1-202ENST00000377797 GRID2IPA4D2P6 1211 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 CTSHP09668 335 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 GARTP22102 1010 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 ARL1P40616 181 aaPredicted RBP15.47■□□□□ 0.07
TCOF1-202ENST00000377797 BASP1P80723 227 aaKnown RBP15.47■□□□□ 0.07
TCOF1-202ENST00000377797 TBX2Q13207 712 aaPredicted RBP15.47■□□□□ 0.07
TCOF1-202ENST00000377797 TMEM132BQ14DG7 1078 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 CPA4Q9UI42 421 aa15.47■□□□□ 0.07
TCOF1-202ENST00000377797 ASTN2O75129 1339 aaPredicted RBP15.46■□□□□ 0.07
TCOF1-202ENST00000377797 PKD1L3Q7Z443 1732 aa15.46■□□□□ 0.07
TCOF1-202ENST00000377797 TCHHQ07283 1943 aa15.46■□□□□ 0.07
TCOF1-202ENST00000377797 PLA2G6O60733 806 aa15.46■□□□□ 0.07
TCOF1-202ENST00000377797 RBP5P82980 135 aa15.46■□□□□ 0.07
TCOF1-202ENST00000377797 CAPS2Q9BXY5 557 aa15.46■□□□□ 0.07
TCOF1-202ENST00000377797 TRIM7Q9C029 511 aa15.46■□□□□ 0.07
TCOF1-202ENST00000377797 DNAJC17Q9NVM6 304 aaKnown RBP15.46■□□□□ 0.07
TCOF1-202ENST00000377797 UBIAD1Q9Y5Z9 338 aa15.46■□□□□ 0.07
TCOF1-202ENST00000377797 POC1B-GALNT4F8VUJ3 575 aa15.46■□□□□ 0.07
TCOF1-202ENST00000377797 OGTO15294 1046 aa15.46■□□□□ 0.07
TCOF1-202ENST00000377797 RHOT1Q8IXI2 618 aa15.46■□□□□ 0.07
TCOF1-202ENST00000377797 MORC4Q8TE76 937 aa15.46■□□□□ 0.07
TCOF1-202ENST00000377797 AFG1LQ8WV93 481 aa15.46■□□□□ 0.07
TCOF1-202ENST00000377797 CABS1Q96KC9 395 aa15.46■□□□□ 0.07
TCOF1-202ENST00000377797 WEE2P0C1S8 567 aa15.46■□□□□ 0.07
TCOF1-202ENST00000377797 STX2P32856 288 aa15.46■□□□□ 0.07
TCOF1-202ENST00000377797 YWHAGP61981 247 aaKnown RBP eCLIP15.46■□□□□ 0.07
TCOF1-202ENST00000377797 MYBPC2Q14324 1141 aa15.46■□□□□ 0.07
TCOF1-202ENST00000377797 MTMR14Q8NCE2 650 aa15.46■□□□□ 0.07
TCOF1-202ENST00000377797 HSD17B14Q9BPX1 270 aa15.46■□□□□ 0.07
TCOF1-202ENST00000377797 KATNAL1Q9BW62 490 aa15.46■□□□□ 0.07
TCOF1-202ENST00000377797 IP6K2Q9UHH9 426 aa15.46■□□□□ 0.07
TCOF1-202ENST00000377797 SSX2IPQ9Y2D8 614 aa15.46■□□□□ 0.07
TCOF1-202ENST00000377797 HGSO14964 777 aaPredicted RBP15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms