RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 C12orf56Q8IXR9 622 aa18.42■□□□□ 0.54
TRIM27-201ENST00000377194 ARMC2Q8NEN0 867 aa18.42■□□□□ 0.54
TRIM27-201ENST00000377194 THAP2Q9H0W7 228 aa18.42■□□□□ 0.54
TRIM27-201ENST00000377194 SEPT11Q9NVA2 429 aaKnown RBP18.42■□□□□ 0.54
TRIM27-201ENST00000377194 CTDP1Q9Y5B0 961 aaPredicted RBP18.42■□□□□ 0.54
TRIM27-201ENST00000377194 C5orf60A6NFR6 353 aa18.42■□□□□ 0.54
TRIM27-201ENST00000377194 ANKRD63C9JTQ0 380 aa18.42■□□□□ 0.54
TRIM27-201ENST00000377194 TULP1O00294 542 aaPredicted RBP18.42■□□□□ 0.54
TRIM27-201ENST00000377194 DNAJC8O75937 253 aaPredicted RBP18.42■□□□□ 0.54
TRIM27-201ENST00000377194 ADRB2P07550 413 aa18.42■□□□□ 0.54
TRIM27-201ENST00000377194 BACE1P56817 501 aa18.42■□□□□ 0.54
TRIM27-201ENST00000377194 TGFB2P61812 414 aa18.42■□□□□ 0.54
TRIM27-201ENST00000377194 KIF22Q14807 665 aa18.42■□□□□ 0.54
TRIM27-201ENST00000377194 FAM133BQ5BKY9 247 aaKnown RBP18.42■□□□□ 0.54
TRIM27-201ENST00000377194 TMEM174Q8WUU8 243 aa18.42■□□□□ 0.54
TRIM27-201ENST00000377194 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.42■□□□□ 0.54
TRIM27-201ENST00000377194 HES6Q96HZ4 224 aa18.42■□□□□ 0.54
TRIM27-201ENST00000377194 RNF146Q9NTX7 359 aa18.42■□□□□ 0.54
TRIM27-201ENST00000377194 SUCLA2Q9P2R7 463 aaPredicted RBP18.42■□□□□ 0.54
TRIM27-201ENST00000377194 PPP1R1BQ9UD71 204 aaPredicted RBP18.42■□□□□ 0.54
TRIM27-201ENST00000377194 CNOT7Q9UIV1 285 aaKnown RBP18.42■□□□□ 0.54
TRIM27-201ENST00000377194 NOC2LQ9Y3T9 749 aaKnown RBP18.42■□□□□ 0.54
TRIM27-201ENST00000377194 WDR64B1ANS9 1081 aa18.41■□□□□ 0.54
TRIM27-201ENST00000377194 TMEM253P0C7T8 217 aa18.41■□□□□ 0.54
TRIM27-201ENST00000377194 ITGA4P13612 1032 aa18.41■□□□□ 0.54
TRIM27-201ENST00000377194 TNFAIP3P21580 790 aa18.41■□□□□ 0.54
TRIM27-201ENST00000377194 PPATQ06203 517 aa18.41■□□□□ 0.54
TRIM27-201ENST00000377194 ALCAMQ13740 583 aa18.41■□□□□ 0.54
TRIM27-201ENST00000377194 EPC2Q52LR7 807 aa18.41■□□□□ 0.54
TRIM27-201ENST00000377194 BZW1Q7L1Q6 419 aaKnown RBP18.41■□□□□ 0.54
TRIM27-201ENST00000377194 CBWD2Q8IUF1 395 aa18.41■□□□□ 0.54
TRIM27-201ENST00000377194 CCDC63Q8NA47 563 aa18.41■□□□□ 0.54
TRIM27-201ENST00000377194 DDX47Q9H0S4 455 aaKnown RBP18.41■□□□□ 0.54
TRIM27-201ENST00000377194 ST6GALNAC4Q9H4F1 302 aa18.41■□□□□ 0.54
TRIM27-201ENST00000377194 COG5Q9UP83 839 aa18.41■□□□□ 0.54
TRIM27-201ENST00000377194 GJA3Q9Y6H8 435 aa18.41■□□□□ 0.54
TRIM27-201ENST00000377194 BAG6P46379 1132 aa18.41■□□□□ 0.54
TRIM27-201ENST00000377194 NCKAP1LP55160 1127 aa18.41■□□□□ 0.54
TRIM27-201ENST00000377194 SLC8A3P57103 927 aa18.41■□□□□ 0.54
TRIM27-201ENST00000377194 VSIG10LQ86VR7 867 aa18.41■□□□□ 0.54
TRIM27-201ENST00000377194 PARD3BQ8TEW8 1205 aa18.41■□□□□ 0.54
TRIM27-201ENST00000377194 RFFLQ8WZ73 363 aa18.41■□□□□ 0.54
TRIM27-201ENST00000377194 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.41■□□□□ 0.543e-7■■■□□ 18.3
TRIM27-201ENST00000377194 TMEM117Q9H0C3 514 aa18.41■□□□□ 0.54
TRIM27-201ENST00000377194 ACP6Q9NPH0 428 aa18.41■□□□□ 0.54
TRIM27-201ENST00000377194 SART1O43290 800 aaKnown RBP18.4■□□□□ 0.54
TRIM27-201ENST00000377194 RGS20O76081 388 aa18.4■□□□□ 0.54
TRIM27-201ENST00000377194 UPP2O95045 317 aa18.4■□□□□ 0.54
TRIM27-201ENST00000377194 NR3C2P08235 984 aa18.4■□□□□ 0.54
TRIM27-201ENST00000377194 KRT71Q3SY84 523 aa18.4■□□□□ 0.54
TRIM27-201ENST00000377194 MAB21L3Q8N8X9 362 aa18.4■□□□□ 0.54
TRIM27-201ENST00000377194 TMEM161BQ8NDZ6 487 aa18.4■□□□□ 0.54
TRIM27-201ENST00000377194 MICAL1Q8TDZ2 1067 aa18.4■□□□□ 0.54
TRIM27-201ENST00000377194 BSNDQ8WZ55 320 aa18.4■□□□□ 0.54
TRIM27-201ENST00000377194 ZBTB10Q96DT7 871 aa18.4■□□□□ 0.54
TRIM27-201ENST00000377194 GGT7Q9UJ14 662 aa18.4■□□□□ 0.54
TRIM27-201ENST00000377194 CCT8L1PA6NM43 557 aa18.4■□□□□ 0.54
TRIM27-201ENST00000377194 CCDC169A6NNP5 214 aa18.4■□□□□ 0.54
TRIM27-201ENST00000377194 DAPK3O43293 454 aa18.4■□□□□ 0.54
TRIM27-201ENST00000377194 ZNF862O60290 1169 aa18.4■□□□□ 0.54
TRIM27-201ENST00000377194 NPTX2P47972 431 aa18.4■□□□□ 0.54
TRIM27-201ENST00000377194 JAK3P52333 1124 aa18.4■□□□□ 0.54
TRIM27-201ENST00000377194 AGBL2Q5U5Z8 902 aa18.4■□□□□ 0.54
TRIM27-201ENST00000377194 EIF1ADQ8N9N8 165 aaKnown RBP18.4■□□□□ 0.54
TRIM27-201ENST00000377194 REPS2Q8NFH8 660 aa18.4■□□□□ 0.54
TRIM27-201ENST00000377194 CTNNBL1Q8WYA6 563 aaPredicted RBP18.4■□□□□ 0.54
TRIM27-201ENST00000377194 SAAL1Q96ER3 474 aa18.4■□□□□ 0.54
TRIM27-201ENST00000377194 POP1Q99575 1024 aaKnown RBP18.4■□□□□ 0.54
TRIM27-201ENST00000377194 AGPAT1Q99943 283 aa18.4■□□□□ 0.54
TRIM27-201ENST00000377194 TRPC6Q9Y210 931 aa18.4■□□□□ 0.54
TRIM27-201ENST00000377194 C15orf41Q9Y2V0 281 aa18.4■□□□□ 0.54
TRIM27-201ENST00000377194 NCANO14594 1321 aa18.4■□□□□ 0.54
TRIM27-201ENST00000377194 PGRMC1O00264 195 aaKnown RBP18.39■□□□□ 0.54
TRIM27-201ENST00000377194 HMGCS2P54868 508 aa18.39■□□□□ 0.54
TRIM27-201ENST00000377194 KRT76Q01546 638 aa18.39■□□□□ 0.54
TRIM27-201ENST00000377194 SYCE1Q8N0S2 351 aa18.39■□□□□ 0.54
TRIM27-201ENST00000377194 RASGEF1CQ8N431 466 aa18.39■□□□□ 0.54
TRIM27-201ENST00000377194 ELMO3Q96BJ8 720 aa18.39■□□□□ 0.54
TRIM27-201ENST00000377194 MOV10L1Q9BXT6 1211 aaKnown RBP18.39■□□□□ 0.54
TRIM27-201ENST00000377194 KDM4CQ9H3R0 1056 aa18.39■□□□□ 0.54
TRIM27-201ENST00000377194 TBX20Q9UMR3 447 aa18.39■□□□□ 0.54
TRIM27-201ENST00000377194 NR2E1Q9Y466 385 aa18.39■□□□□ 0.54
TRIM27-201ENST00000377194 PAEPP09466 180 aa18.39■□□□□ 0.53
TRIM27-201ENST00000377194 RPS12P25398 132 aaKnown RBP18.39■□□□□ 0.53
TRIM27-201ENST00000377194 SFNP31947 248 aa18.39■□□□□ 0.53
TRIM27-201ENST00000377194 MAP2K1Q02750 393 aaPredicted RBP18.39■□□□□ 0.53
TRIM27-201ENST00000377194 DCAF12L1Q5VU92 463 aa18.39■□□□□ 0.53
TRIM27-201ENST00000377194 SNRNP48Q6IEG0 339 aaKnown RBP18.39■□□□□ 0.53
TRIM27-201ENST00000377194 SAMD3Q8N6K7 520 aa18.39■□□□□ 0.53
TRIM27-201ENST00000377194 AGAP11Q8TF27 550 aa18.39■□□□□ 0.53
TRIM27-201ENST00000377194 CCDC127Q96BQ5 260 aa18.39■□□□□ 0.53
TRIM27-201ENST00000377194 ZNF570Q96NI8 536 aa18.39■□□□□ 0.53
TRIM27-201ENST00000377194 EBF2Q9HAK2 575 aa18.39■□□□□ 0.53
TRIM27-201ENST00000377194 GINM1Q9NU53 330 aa18.39■□□□□ 0.53
TRIM27-201ENST00000377194 CHORDC1Q9UHD1 332 aaPredicted RBP18.39■□□□□ 0.53
TRIM27-201ENST00000377194 TCEAL9Q9UHQ7 104 aa18.39■□□□□ 0.53
TRIM27-201ENST00000377194 AMFRQ9UKV5 643 aa18.39■□□□□ 0.53
TRIM27-201ENST00000377194 PTPRAP18433 802 aa18.38■□□□□ 0.53
TRIM27-201ENST00000377194 CNGA1P29973 690 aa18.38■□□□□ 0.53
TRIM27-201ENST00000377194 ZNF746Q6NUN9 644 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms