RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 RNF25Q96BH1 459 aaPredicted RBP10.34□□□□□ -0.75
TRIM39-202ENST00000376659 C18orf8Q96DM3 657 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 PCYT2Q99447 389 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 FTLP02792 175 aaPredicted RBP10.34□□□□□ -0.75
TRIM39-202ENST00000376659 C4BPAP04003 597 aaKnown RBP10.34□□□□□ -0.75
TRIM39-202ENST00000376659 PYGMP11217 842 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 CNGA1P29973 690 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 DSG3P32926 999 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 ICAM3P32942 547 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 LSP1P33241 339 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 PEX3P56589 373 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 TGFB2P61812 414 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 GCNT1Q02742 428 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 DHX34Q14147 1143 aaKnown RBP10.34□□□□□ -0.75
TRIM39-202ENST00000376659 AGBL2Q5U5Z8 902 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 MON1BQ7L1V2 547 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 OGFOD1Q8N543 542 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 IFT81Q8WYA0 676 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 ERP44Q9BS26 406 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 HACL1Q9UJ83 578 aa10.34□□□□□ -0.75
TRIM39-202ENST00000376659 EDNRBP24530 442 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 FNTAP49354 379 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 TARBP2Q15633 366 aaKnown RBP10.33□□□□□ -0.76
TRIM39-202ENST00000376659 NBPF12Q5TAG4 269 aaPredicted RBP10.33□□□□□ -0.76
TRIM39-202ENST00000376659 JAMLQ86YT9 394 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 SCYL3Q8IZE3 742 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 FAM84AQ96KN4 292 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 CCDC113Q9H0I3 377 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 TMOD4Q9NZQ9 345 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 PKD2L1Q9P0L9 805 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 PPP1R12BO60237 982 aaPredicted RBP10.33□□□□□ -0.76
TRIM39-202ENST00000376659 SHBGP04278 402 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 COMTP21964 271 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 GARTP22102 1010 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 GPC5P78333 572 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 PDCLQ13371 301 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 ARHGAP44Q17R89 818 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 SH3D19Q5HYK7 790 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 CIAPIN1Q6FI81 312 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 RNF207Q6ZRF8 634 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 DHX38Q92620 1227 aaKnown RBP10.33□□□□□ -0.76
TRIM39-202ENST00000376659 ART4Q93070 314 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 SAAL1Q96ER3 474 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 FGD4Q96M96 766 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 RMDN3Q96TC7 470 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 TMEM109Q9BVC6 243 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 GTF3C4Q9UKN8 822 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 TRPC6Q9Y210 931 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 SRCAPQ6ZRS2 3230 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 FAM187AA6NFU0 413 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 TMCO5BA8MYB1 307 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 MIF4GDA9UHW6 222 aaKnown RBP10.33□□□□□ -0.76
TRIM39-202ENST00000376659 CFHP08603 1231 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 FDX1P10109 184 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 NR1D1P20393 614 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 ABCB4P21439 1286 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 RPL21P46778 160 aaKnown RBP10.33□□□□□ -0.76
TRIM39-202ENST00000376659 MXI1P50539 228 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 NAP1L1P55209 391 aaKnown RBP10.33□□□□□ -0.76
TRIM39-202ENST00000376659 GNGT1P63211 74 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 ZNF211Q13398 564 aaPredicted RBP10.33□□□□□ -0.76
TRIM39-202ENST00000376659 VPS36Q86VN1 386 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 MORC4Q8TE76 937 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 TATDN2Q93075 761 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 ELMO3Q96BJ8 720 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 BTBD6Q96KE9 485 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 EPN3Q9H201 632 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 CHORDC1Q9UHD1 332 aaPredicted RBP10.33□□□□□ -0.76
TRIM39-202ENST00000376659 GGA2Q9UJY4 613 aa10.33□□□□□ -0.76
TRIM39-202ENST00000376659 ZBTB42B2RXF5 422 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 CYP26A1O43174 497 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 ZC3H11AO75152 810 aaKnown RBP eCLIP10.32□□□□□ -0.76
TRIM39-202ENST00000376659 GGPS1O95749 300 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 CALCAP01258 141 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 ARL2P36404 184 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 NOP2P46087 812 aaKnown RBP10.32□□□□□ -0.76
TRIM39-202ENST00000376659 TDRD10Q5VZ19 366 aaKnown RBP10.32□□□□□ -0.76
TRIM39-202ENST00000376659 CATSPERGQ6ZRH7 1159 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 SV2AQ7L0J3 742 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 MAEAQ7L5Y9 396 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 RDH13Q8NBN7 331 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 CTNNBL1Q8WYA6 563 aaPredicted RBP10.32□□□□□ -0.76
TRIM39-202ENST00000376659 GLG1Q92896 1179 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 DHX33Q9H6R0 707 aaKnown RBP10.32□□□□□ -0.76
TRIM39-202ENST00000376659 LRRC19Q9H756 370 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 APOBEC3GQ9HC16 384 aaKnown RBP10.32□□□□□ -0.76
TRIM39-202ENST00000376659 AFG3L2Q9Y4W6 797 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 FSCN2O14926 492 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 MAFGO15525 162 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 MDH1P40925 334 aaKnown RBP10.32□□□□□ -0.76
TRIM39-202ENST00000376659 GUCY1A3Q02108 690 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 MAP2K1Q02750 393 aaPredicted RBP10.32□□□□□ -0.76
TRIM39-202ENST00000376659 CENPCQ03188 943 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 BAATQ14032 418 aaPredicted RBP10.32□□□□□ -0.76
TRIM39-202ENST00000376659 PSMD6Q15008 389 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 KCTD16Q68DU8 428 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 KRT39Q6A163 491 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 ATXN2LQ8WWM7 1075 aaKnown RBP10.32□□□□□ -0.76
TRIM39-202ENST00000376659 TAF4BQ92750 862 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 KIFAP3Q92845 792 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms