RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 SLC16A3O15427 465 aaKnown RBP15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 RTN2O75298 545 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 UPP2O95045 317 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 HOXD13P35453 343 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 PPP2R5DQ14738 602 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 SPRED3Q2MJR0 410 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 SMTNL2Q2TAL5 461 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 KRT39Q6A163 491 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 FMNL3Q8IVF7 1028 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 PALM2Q8IXS6 379 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ZBED8Q8IZ13 594 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 STAMBPL1Q96FJ0 436 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 FAM187AA6NFU0 413 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 P4HBP07237 508 aaKnown RBP15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 PLS3P13797 630 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 EPM2AIP1Q7L775 607 aaPredicted RBP15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 FUKQ8N0W3 1084 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 LRRC57Q8N9N7 239 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 NOD2Q9HC29 1040 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 FAM198AQ9UFP1 575 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 TLR3O15455 904 aaKnown RBP15.34■□□□□ 0.05
TNFRSF1B-201ENST00000376259 SRGAP2CP0DJJ0 459 aa15.34■□□□□ 0.05
TNFRSF1B-201ENST00000376259 CNGA1P29973 690 aa15.34■□□□□ 0.05
TNFRSF1B-201ENST00000376259 DHX34Q14147 1143 aaKnown RBP15.34■□□□□ 0.05
TNFRSF1B-201ENST00000376259 AGBL2Q5U5Z8 902 aa15.34■□□□□ 0.05
TNFRSF1B-201ENST00000376259 SCYL3Q8IZE3 742 aa15.34■□□□□ 0.05
TNFRSF1B-201ENST00000376259 FBXL13Q8NEE6 735 aa15.34■□□□□ 0.05
TNFRSF1B-201ENST00000376259 EDIL3O43854 480 aa15.34■□□□□ 0.05
TNFRSF1B-201ENST00000376259 SLC8A1P32418 973 aa15.34■□□□□ 0.05
TNFRSF1B-201ENST00000376259 GABPAQ06546 454 aa15.34■□□□□ 0.05
TNFRSF1B-201ENST00000376259 OVGP1Q12889 678 aa15.34■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ORC1Q13415 861 aa15.34■□□□□ 0.05
TNFRSF1B-201ENST00000376259 RCN2Q14257 317 aa15.34■□□□□ 0.05
TNFRSF1B-201ENST00000376259 CDO1Q16878 200 aa15.34■□□□□ 0.05
TNFRSF1B-201ENST00000376259 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF1B-201ENST00000376259 MYH7P12883 1935 aa15.34■□□□□ 0.05
TNFRSF1B-201ENST00000376259 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.33■□□□□ 0.05
TNFRSF1B-201ENST00000376259 GH1P01241 217 aa15.33■□□□□ 0.05
TNFRSF1B-201ENST00000376259 NOP14P78316 857 aaKnown RBP15.33■□□□□ 0.05
TNFRSF1B-201ENST00000376259 P3H1Q32P28 736 aa15.33■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ATP13A4Q4VNC1 1196 aa15.33■□□□□ 0.05
TNFRSF1B-201ENST00000376259 VPS52Q8N1B4 723 aa15.33■□□□□ 0.05
TNFRSF1B-201ENST00000376259 CNKSR1Q969H4 720 aa15.33■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ZKSCAN4Q969J2 545 aaPredicted RBP15.33■□□□□ 0.05
TNFRSF1B-201ENST00000376259 MCUR1Q96AQ8 359 aa15.33■□□□□ 0.05
TNFRSF1B-201ENST00000376259 SMC6Q96SB8 1091 aa15.33■□□□□ 0.05
TNFRSF1B-201ENST00000376259 GINM1Q9NU53 330 aa15.33■□□□□ 0.05
TNFRSF1B-201ENST00000376259 SNED1Q8TER0 1413 aa15.33■□□□□ 0.04
TNFRSF1B-201ENST00000376259 ZSCAN5DPP0CG00 497 aa15.33■□□□□ 0.04
TNFRSF1B-201ENST00000376259 YWHAGP61981 247 aaKnown RBP eCLIP15.33■□□□□ 0.04
TNFRSF1B-201ENST00000376259 IL9RQ01113 521 aa15.33■□□□□ 0.04
TNFRSF1B-201ENST00000376259 THNSL1Q8IYQ7 743 aa15.33■□□□□ 0.04
TNFRSF1B-201ENST00000376259 IL31RAQ8NI17 732 aa15.33■□□□□ 0.04
TNFRSF1B-201ENST00000376259 RSAD2Q8WXG1 361 aa15.33■□□□□ 0.04
TNFRSF1B-201ENST00000376259 RUBCNQ92622 972 aa15.33■□□□□ 0.04
TNFRSF1B-201ENST00000376259 TAAR1Q96RJ0 339 aa15.33■□□□□ 0.04
TNFRSF1B-201ENST00000376259 RBM15Q96T37 977 aaKnown RBP eCLIP15.33■□□□□ 0.042e-13■■■■■ 44.4
TNFRSF1B-201ENST00000376259 STK24Q9Y6E0 443 aa15.33■□□□□ 0.04
TNFRSF1B-201ENST00000376259 N4BP2Q86UW6 1770 aaPredicted RBP15.33■□□□□ 0.04
TNFRSF1B-201ENST00000376259 KCNJ2P63252 427 aa15.33■□□□□ 0.04
TNFRSF1B-201ENST00000376259 SPP2Q13103 211 aa15.33■□□□□ 0.04
TNFRSF1B-201ENST00000376259 C1orf186Q6ZWK4 172 aa15.33■□□□□ 0.04
TNFRSF1B-201ENST00000376259 FAM129AQ9BZQ8 928 aa15.33■□□□□ 0.04
TNFRSF1B-201ENST00000376259 WRAP73Q9P2S5 460 aaPredicted RBP15.33■□□□□ 0.04
TNFRSF1B-201ENST00000376259 CASZ1Q86V15 1759 aa15.33■□□□□ 0.04
TNFRSF1B-201ENST00000376259 CICQ96RK0 1608 aaPredicted RBP15.33■□□□□ 0.04
TNFRSF1B-201ENST00000376259 RBAK-RBAKDNI3L0D1 243 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 KIAA0391O15091 583 aaKnown RBP15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 CHKAP35790 457 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 MDH1BQ5I0G3 518 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 NSMCE1Q8WV22 266 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 ERP27Q96DN0 273 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 MASTLQ96GX5 879 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 PNMA3Q9UL41 463 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 CYP11B1P15538 503 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 IGBP1P78318 339 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 JAG1P78504 1218 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 TTC27Q6P3X3 843 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 HHIPL2Q6UWX4 724 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 ARHGEF18Q6ZSZ5 1173 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 SPATA21Q7Z572 469 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 CCDC33Q8N5R6 958 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 TTC16Q8NEE8 873 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 TTC17Q96AE7 1141 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 PCDHB18PQ96TA0 734 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 TUFT1Q9NNX1 390 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 GAKO14976 1311 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 TBX3O15119 743 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 ZBED4O75132 1171 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 ELF1P32519 619 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 TAF11Q15544 211 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 ANKRD20A3Q5VUR7 823 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 RPAINQ86UA6 219 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 POLR3CQ9BUI4 534 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 WNT8AQ9H1J5 351 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 PCDHA2Q9Y5H9 948 aa15.32■□□□□ 0.04
TNFRSF1B-201ENST00000376259 HSPA6P17066 643 aa15.31■□□□□ 0.04
TNFRSF1B-201ENST00000376259 TARSP26639 723 aaKnown RBP15.31■□□□□ 0.04
TNFRSF1B-201ENST00000376259 ARSEP51690 589 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms