RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 ZSWIM2Q8NEG5 633 aa24.94■■□□□ 1.58
HLA-C-202ENST00000376237 TRIM43Q96BQ3 446 aaPredicted RBP24.94■■□□□ 1.58
HLA-C-202ENST00000376237 SCLYQ96I15 445 aa24.94■■□□□ 1.58
HLA-C-202ENST00000376237 TUBGCP2Q9BSJ2 902 aa24.94■■□□□ 1.58
HLA-C-202ENST00000376237 CCDC94Q9BW85 323 aaPredicted RBP24.94■■□□□ 1.58
HLA-C-202ENST00000376237 EIF2AQ9BY44 585 aaKnown RBP24.94■■□□□ 1.58
HLA-C-202ENST00000376237 TMX1Q9H3N1 280 aa24.94■■□□□ 1.58
HLA-C-202ENST00000376237 STAG3L1P0CL83 205 aa24.93■■□□□ 1.58
HLA-C-202ENST00000376237 PRKCSHP14314 528 aaPredicted RBP24.93■■□□□ 1.58
HLA-C-202ENST00000376237 FANCCQ00597 558 aa24.93■■□□□ 1.58
HLA-C-202ENST00000376237 BFSP1Q12934 665 aa24.93■■□□□ 1.58
HLA-C-202ENST00000376237 KRT31Q15323 416 aa24.93■■□□□ 1.58
HLA-C-202ENST00000376237 HACE1Q8IYU2 909 aa24.93■■□□□ 1.58
HLA-C-202ENST00000376237 DBF4BQ8NFT6 615 aa24.93■■□□□ 1.58
HLA-C-202ENST00000376237 TMC2Q8TDI7 906 aa24.93■■□□□ 1.58
HLA-C-202ENST00000376237 RBAKQ9NYW8 714 aaPredicted RBP24.93■■□□□ 1.58
HLA-C-202ENST00000376237 CYP24A1Q07973 514 aa24.92■■□□□ 1.58
HLA-C-202ENST00000376237 SURF1Q15526 300 aa24.92■■□□□ 1.58
HLA-C-202ENST00000376237 MAN2A1Q16706 1144 aa24.92■■□□□ 1.58
HLA-C-202ENST00000376237 FILIP1LQ4L180 1135 aa24.92■■□□□ 1.58
HLA-C-202ENST00000376237 MFSD5Q6N075 450 aa24.92■■□□□ 1.58
HLA-C-202ENST00000376237 BRSK2Q8IWQ3 736 aa24.92■■□□□ 1.58
HLA-C-202ENST00000376237 TMEM199Q8N511 208 aa24.92■■□□□ 1.58
HLA-C-202ENST00000376237 ACAP3Q96P50 834 aa24.92■■□□□ 1.58
HLA-C-202ENST00000376237 ADAM2Q99965 735 aa24.92■■□□□ 1.58
HLA-C-202ENST00000376237 RPF1Q9H9Y2 349 aaKnown RBP24.92■■□□□ 1.58
HLA-C-202ENST00000376237 RGS18Q9NS28 235 aa24.92■■□□□ 1.58
HLA-C-202ENST00000376237 FAM105AQ9NUU6 356 aa24.92■■□□□ 1.58
HLA-C-202ENST00000376237 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.92■■□□□ 1.58
HLA-C-202ENST00000376237 ZNF623O75123 536 aa24.91■■□□□ 1.58
HLA-C-202ENST00000376237 ADRB2P07550 413 aa24.91■■□□□ 1.58
HLA-C-202ENST00000376237 VAMP7P51809 220 aa24.91■■□□□ 1.58
HLA-C-202ENST00000376237 PLCB2Q00722 1185 aa24.91■■□□□ 1.58
HLA-C-202ENST00000376237 PSMD6Q15008 389 aa24.91■■□□□ 1.58
HLA-C-202ENST00000376237 ZBTB41Q5SVQ8 909 aa24.91■■□□□ 1.58
HLA-C-202ENST00000376237 CEP120Q8N960 986 aa24.91■■□□□ 1.58
HLA-C-202ENST00000376237 PCDHB2Q9Y5E7 798 aa24.91■■□□□ 1.58
HLA-C-202ENST00000376237 A0A0U1RQF3 1178 aa24.91■■□□□ 1.58
HLA-C-202ENST00000376237 TNFSF9P41273 254 aa24.91■■□□□ 1.58
HLA-C-202ENST00000376237 COPB1P53618 953 aaKnown RBP24.91■■□□□ 1.58
HLA-C-202ENST00000376237 SEZ6Q53EL9 994 aa24.91■■□□□ 1.58
HLA-C-202ENST00000376237 APTXQ7Z2E3 356 aaKnown RBP24.91■■□□□ 1.58
HLA-C-202ENST00000376237 PARD3BQ8TEW8 1205 aa24.91■■□□□ 1.58
HLA-C-202ENST00000376237 PLEKHA5Q9HAU0 1116 aa24.91■■□□□ 1.58
HLA-C-202ENST00000376237 C1orf112Q9NSG2 853 aa24.91■■□□□ 1.58
HLA-C-202ENST00000376237 IPPQ9Y573 584 aa24.91■■□□□ 1.58
HLA-C-202ENST00000376237 CBFA2T2O43439 604 aa24.9■■□□□ 1.58
HLA-C-202ENST00000376237 STX10O60499 249 aa24.9■■□□□ 1.58
HLA-C-202ENST00000376237 MGEA5O60502 916 aa24.9■■□□□ 1.58
HLA-C-202ENST00000376237 IL18RAPO95256 599 aa24.9■■□□□ 1.58
HLA-C-202ENST00000376237 TPM3P06753 285 aa24.9■■□□□ 1.58
HLA-C-202ENST00000376237 YARSP54577 528 aaKnown RBP24.9■■□□□ 1.58
HLA-C-202ENST00000376237 UBASH3AP57075 661 aa24.9■■□□□ 1.58
HLA-C-202ENST00000376237 OSTNP61366 133 aa24.9■■□□□ 1.58
HLA-C-202ENST00000376237 SLC24A5Q71RS6 500 aa24.9■■□□□ 1.58
HLA-C-202ENST00000376237 CD302Q8IX05 232 aa24.9■■□□□ 1.58
HLA-C-202ENST00000376237 RPUSD2Q8IZ73 545 aaKnown RBP24.9■■□□□ 1.58
HLA-C-202ENST00000376237 FNBP1Q96RU3 617 aa24.9■■□□□ 1.58
HLA-C-202ENST00000376237 TSPYL2Q9H2G4 693 aaPredicted RBP24.9■■□□□ 1.58
HLA-C-202ENST00000376237 TOPORSQ9NS56 1045 aaPredicted RBP24.9■■□□□ 1.58
HLA-C-202ENST00000376237 TAB2Q9NYJ8 693 aa24.9■■□□□ 1.58
HLA-C-202ENST00000376237 TANC1Q9C0D5 1861 aa24.9■■□□□ 1.58
HLA-C-202ENST00000376237 PFKMP08237 780 aa24.89■■□□□ 1.57
HLA-C-202ENST00000376237 ENOX2Q16206 610 aaKnown RBP24.89■■□□□ 1.57
HLA-C-202ENST00000376237 VWA3BQ502W6 1294 aa24.89■■□□□ 1.57
HLA-C-202ENST00000376237 TCERG1LQ5VWI1 586 aa24.89■■□□□ 1.57
HLA-C-202ENST00000376237 MRPL10Q7Z7H8 261 aaKnown RBP24.89■■□□□ 1.57
HLA-C-202ENST00000376237 SMG8Q8ND04 991 aaKnown RBP24.89■■□□□ 1.57
HLA-C-202ENST00000376237 SLC35C1Q96A29 364 aa24.89■■□□□ 1.57
HLA-C-202ENST00000376237 VPS16Q9H269 839 aa24.89■■□□□ 1.57
HLA-C-202ENST00000376237 NDST4Q9H3R1 872 aa24.89■■□□□ 1.57
HLA-C-202ENST00000376237 NXF3Q9H4D5 531 aaKnown RBP24.89■■□□□ 1.57
HLA-C-202ENST00000376237 ASB7Q9H672 318 aa24.89■■□□□ 1.57
HLA-C-202ENST00000376237 SNTG2Q9NY99 539 aa24.89■■□□□ 1.57
HLA-C-202ENST00000376237 EVI5O60447 810 aa24.88■■□□□ 1.57
HLA-C-202ENST00000376237 ITGB8P26012 769 aa24.88■■□□□ 1.57
HLA-C-202ENST00000376237 DCAF17Q5H9S7 520 aaPredicted RBP24.88■■□□□ 1.57
HLA-C-202ENST00000376237 CNKSR3Q6P9H4 555 aa24.88■■□□□ 1.57
HLA-C-202ENST00000376237 DEFB128Q7Z7B8 93 aa24.88■■□□□ 1.57
HLA-C-202ENST00000376237 TMEM192Q8IY95 271 aa24.88■■□□□ 1.57
HLA-C-202ENST00000376237 CCDC127Q96BQ5 260 aa24.88■■□□□ 1.57
HLA-C-202ENST00000376237 PGBD4Q96DM1 585 aa24.88■■□□□ 1.57
HLA-C-202ENST00000376237 TRIM5Q9C035 493 aa24.88■■□□□ 1.57
HLA-C-202ENST00000376237 RNF216Q9NWF9 866 aaPredicted RBP24.88■■□□□ 1.57
HLA-C-202ENST00000376237 A0A1B0GTH6 734 aa24.87■■□□□ 1.57
HLA-C-202ENST00000376237 CLDN10P78369 228 aa24.87■■□□□ 1.57
HLA-C-202ENST00000376237 FAM189BP81408 668 aa24.87■■□□□ 1.57
HLA-C-202ENST00000376237 KCNH2Q12809 1159 aa24.87■■□□□ 1.57
HLA-C-202ENST00000376237 SLC10A6Q3KNW5 377 aa24.87■■□□□ 1.57
HLA-C-202ENST00000376237 RTN4RL1Q86UN2 441 aaPredicted RBP24.87■■□□□ 1.57
HLA-C-202ENST00000376237 TSPAN18Q96SJ8 248 aa24.87■■□□□ 1.57
HLA-C-202ENST00000376237 IFNKQ9P0W0 207 aa24.87■■□□□ 1.57
HLA-C-202ENST00000376237 TTC26A0AVF1 554 aa24.86■■□□□ 1.57
HLA-C-202ENST00000376237 C9IYK1 514 aa24.86■■□□□ 1.57
HLA-C-202ENST00000376237 EOMESO95936 686 aa24.86■■□□□ 1.57
HLA-C-202ENST00000376237 AFPP02771 609 aaKnown RBP24.86■■□□□ 1.57
HLA-C-202ENST00000376237 CXCL8P10145 99 aa24.86■■□□□ 1.57
HLA-C-202ENST00000376237 ITGA4P13612 1032 aa24.86■■□□□ 1.57
HLA-C-202ENST00000376237 GTF2H1P32780 548 aa24.86■■□□□ 1.57
HLA-C-202ENST00000376237 AP3M2P53677 418 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms