RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 TRPV6Q9H1D0 765 aa11.38□□□□□ -0.59
PDPN-203ENST00000376061 AGPAT5Q9NUQ2 364 aa11.38□□□□□ -0.59
PDPN-203ENST00000376061 A0A1B0GUA9 196 aa11.37□□□□□ -0.59
PDPN-203ENST00000376061 ZNF233A6NK53 670 aa11.37□□□□□ -0.59
PDPN-203ENST00000376061 RBAK-RBAKDNI3L0D1 243 aa11.37□□□□□ -0.59
PDPN-203ENST00000376061 ARVCFO00192 962 aa11.37□□□□□ -0.59
PDPN-203ENST00000376061 LDHAP00338 332 aaKnown RBP11.37□□□□□ -0.59
PDPN-203ENST00000376061 CHRNA1P02708 482 aa11.37□□□□□ -0.59
PDPN-203ENST00000376061 GYPCP04921 128 aa11.37□□□□□ -0.59
PDPN-203ENST00000376061 MCF2P10911 925 aa11.37□□□□□ -0.59
PDPN-203ENST00000376061 THPOP40225 353 aa11.37□□□□□ -0.59
PDPN-203ENST00000376061 FMO5P49326 533 aa11.37□□□□□ -0.59
PDPN-203ENST00000376061 NUBP1P53384 320 aa11.37□□□□□ -0.59
PDPN-203ENST00000376061 WNT7BP56706 349 aa11.37□□□□□ -0.59
PDPN-203ENST00000376061 MYL7Q01449 175 aa11.37□□□□□ -0.59
PDPN-203ENST00000376061 ENPEPQ07075 957 aa11.37□□□□□ -0.59
PDPN-203ENST00000376061 ARID5BQ14865 1188 aa11.37□□□□□ -0.59
PDPN-203ENST00000376061 PSMD6Q15008 389 aa11.37□□□□□ -0.59
PDPN-203ENST00000376061 SEZ6Q53EL9 994 aa11.37□□□□□ -0.59
PDPN-203ENST00000376061 FAM228AQ86W67 206 aa11.37□□□□□ -0.59
PDPN-203ENST00000376061 BRSK2Q8IWQ3 736 aa11.37□□□□□ -0.59
PDPN-203ENST00000376061 CEP120Q8N960 986 aa11.37□□□□□ -0.59
PDPN-203ENST00000376061 PARD3BQ8TEW8 1205 aa11.37□□□□□ -0.59
PDPN-203ENST00000376061 U2AF1L4Q8WU68 220 aaKnown RBP11.37□□□□□ -0.59
PDPN-203ENST00000376061 CCDC127Q96BQ5 260 aa11.37□□□□□ -0.59
PDPN-203ENST00000376061 TTYH3Q9C0H2 523 aa11.37□□□□□ -0.59
PDPN-203ENST00000376061 TOPORSQ9NS56 1045 aaPredicted RBP11.37□□□□□ -0.59
PDPN-203ENST00000376061 RBAKQ9NYW8 714 aaPredicted RBP11.37□□□□□ -0.59
PDPN-203ENST00000376061 NOD1Q9Y239 953 aa11.37□□□□□ -0.59
PDPN-203ENST00000376061 GTPBP10A4D1E9 387 aaKnown RBP11.36□□□□□ -0.59
PDPN-203ENST00000376061 LRRIQ3A6PVS8 624 aaPredicted RBP11.36□□□□□ -0.59
PDPN-203ENST00000376061 EPHB6O15197 1021 aa11.36□□□□□ -0.59
PDPN-203ENST00000376061 CAND2O75155 1236 aa11.36□□□□□ -0.59
PDPN-203ENST00000376061 HOXA11P31270 313 aaPredicted RBP11.36□□□□□ -0.59
PDPN-203ENST00000376061 TNFSF9P41273 254 aa11.36□□□□□ -0.59
PDPN-203ENST00000376061 GSDMDP57764 484 aa11.36□□□□□ -0.59
PDPN-203ENST00000376061 PPP3CAQ08209 521 aa11.36□□□□□ -0.59
PDPN-203ENST00000376061 KCNMA1Q12791 1236 aa11.36□□□□□ -0.59
PDPN-203ENST00000376061 TRIM14Q14142 442 aa11.36□□□□□ -0.59
PDPN-203ENST00000376061 CBWD6Q4V339 395 aa11.36□□□□□ -0.59
PDPN-203ENST00000376061 CBWD3Q5JTY5 395 aa11.36□□□□□ -0.59
PDPN-203ENST00000376061 CBWD5Q5RIA9 395 aa11.36□□□□□ -0.59
PDPN-203ENST00000376061 CCDC150Q8NCX0 1101 aa11.36□□□□□ -0.59
PDPN-203ENST00000376061 PCMTD1Q96MG8 357 aaPredicted RBP11.36□□□□□ -0.59
PDPN-203ENST00000376061 CRACR2AQ9BSW2 395 aa11.36□□□□□ -0.59
PDPN-203ENST00000376061 SEZ6LQ9BYH1 1024 aa11.36□□□□□ -0.59
PDPN-203ENST00000376061 MMRN2Q9H8L6 949 aa11.36□□□□□ -0.59
PDPN-203ENST00000376061 CPSF3Q9UKF6 684 aaKnown RBP11.36□□□□□ -0.59
PDPN-203ENST00000376061 NOC2LQ9Y3T9 749 aaKnown RBP11.36□□□□□ -0.59
PDPN-203ENST00000376061 PTPRJQ12913 1337 aa11.36□□□□□ -0.59
PDPN-203ENST00000376061 TRIP11Q15643 1979 aa11.36□□□□□ -0.59
PDPN-203ENST00000376061 N4BP1O75113 896 aaKnown RBP11.35□□□□□ -0.59
PDPN-203ENST00000376061 MFAP3LO75121 409 aa11.35□□□□□ -0.59
PDPN-203ENST00000376061 SGPL1O95470 568 aa11.35□□□□□ -0.59
PDPN-203ENST00000376061 DLATP10515 647 aaKnown RBP11.35□□□□□ -0.59
PDPN-203ENST00000376061 GCLMP48507 274 aa11.35□□□□□ -0.59
PDPN-203ENST00000376061 MXI1P50539 228 aa11.35□□□□□ -0.59
PDPN-203ENST00000376061 CDK7P50613 346 aa11.35□□□□□ -0.59
PDPN-203ENST00000376061 FXR1P51114 621 aaKnown RBP eCLIP11.35□□□□□ -0.59
PDPN-203ENST00000376061 CLDN10P78369 228 aa11.35□□□□□ -0.59
PDPN-203ENST00000376061 RBL2Q08999 1139 aa11.35□□□□□ -0.59
PDPN-203ENST00000376061 GOLGA8FQ08AF8 430 aa11.35□□□□□ -0.59
PDPN-203ENST00000376061 GOLGA8DPQ0D2H9 430 aa11.35□□□□□ -0.59
PDPN-203ENST00000376061 ENOX2Q16206 610 aaKnown RBP11.35□□□□□ -0.59
PDPN-203ENST00000376061 DCAF4L1Q3SXM0 396 aa11.35□□□□□ -0.59
PDPN-203ENST00000376061 FIGNQ5HY92 759 aa11.35□□□□□ -0.59
PDPN-203ENST00000376061 FAM26DQ5JW98 314 aa11.35□□□□□ -0.59
PDPN-203ENST00000376061 NOTUMQ6P988 496 aa11.35□□□□□ -0.59
PDPN-203ENST00000376061 USP37Q86T82 979 aa11.35□□□□□ -0.59
PDPN-203ENST00000376061 PPFIBP1Q86W92 1011 aa11.35□□□□□ -0.59
PDPN-203ENST00000376061 FAM126BQ8IXS8 530 aa11.35□□□□□ -0.59
PDPN-203ENST00000376061 TMEM192Q8IY95 271 aa11.35□□□□□ -0.59
PDPN-203ENST00000376061 THNSL1Q8IYQ7 743 aa11.35□□□□□ -0.59
PDPN-203ENST00000376061 FAM84AQ96KN4 292 aa11.35□□□□□ -0.59
PDPN-203ENST00000376061 POP1Q99575 1024 aaKnown RBP11.35□□□□□ -0.59
PDPN-203ENST00000376061 CGRRF1Q99675 332 aa11.35□□□□□ -0.59
PDPN-203ENST00000376061 ADPGKQ9BRR6 497 aa11.35□□□□□ -0.59
PDPN-203ENST00000376061 LSM14BQ9BX40 385 aaKnown RBP11.35□□□□□ -0.59
PDPN-203ENST00000376061 KCNF1Q9H3M0 494 aa11.35□□□□□ -0.59
PDPN-203ENST00000376061 PDE11AQ9HCR9 933 aa11.35□□□□□ -0.59
PDPN-203ENST00000376061 FAM207AQ9NSI2 230 aaPredicted RBP11.35□□□□□ -0.59
PDPN-203ENST00000376061 GCNT4Q9P109 453 aa11.35□□□□□ -0.59
PDPN-203ENST00000376061 PIN4Q9Y237 131 aaKnown RBP11.35□□□□□ -0.59
PDPN-203ENST00000376061 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.35□□□□□ -0.59
PDPN-203ENST00000376061 TTC26A0AVF1 554 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 RNF225M0QZC1 329 aaPredicted RBP11.34□□□□□ -0.59
PDPN-203ENST00000376061 MEFVO15553 781 aaPredicted RBP11.34□□□□□ -0.59
PDPN-203ENST00000376061 STX10O60499 249 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 NPTXRO95502 500 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 TFRCP02786 760 aaKnown RBP11.34□□□□□ -0.59
PDPN-203ENST00000376061 CXCL8P10145 99 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 TRIM21P19474 475 aaKnown RBP11.34□□□□□ -0.59
PDPN-203ENST00000376061 AXLP30530 894 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 CASP14P31944 242 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 GTF2H1P32780 548 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 GJA8P48165 433 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 OSTNP61366 133 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 APBA1Q02410 837 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 NCBP1Q09161 790 aaKnown RBP11.34□□□□□ -0.59
PDPN-203ENST00000376061 EXOC3L4Q17RC7 722 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms