RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 PRMT1Q99873 361 aaKnown RBP9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 DDX47Q9H0S4 455 aaKnown RBP9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 PSMD3O43242 534 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 RANBP1P43487 201 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 EPS8Q12929 822 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 ARHGAP22Q7Z5H3 698 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 LRRC6Q86X45 466 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 CFAP36Q96G28 342 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 WARS2Q9UGM6 360 aaKnown RBP9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 GTF3C4Q9UKN8 822 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 TYW5A2RUC4 315 aaKnown RBP9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 POTECB2RU33 542 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 DCTN2Q13561 401 aaKnown RBP9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 ZNF280CQ8ND82 737 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 CEP95Q96GE4 821 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 CNOT8Q9UFF9 292 aaKnown RBP9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 TEKT2Q9UIF3 430 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 MROH1Q8NDA8 1641 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 CRB1P82279 1406 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 IGF2BP3O00425 579 aaKnown RBP eCLIP9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 MEIS1O00470 390 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 COASYQ13057 564 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 SNX17Q15036 470 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 TTBK2Q6IQ55 1244 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 MIGA2Q7L4E1 593 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 LGR6Q9HBX8 967 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 SHOC2Q9UQ13 582 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 TKTP29401 623 aaKnown RBP9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 EFTUD2Q15029 972 aaKnown RBP eCLIP9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 XKR9Q5GH70 373 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 FAM47EQ6ZV65 393 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 MRPL46Q9H2W6 279 aaKnown RBP9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 GPBP1L1Q9HC44 474 aaPredicted RBP9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 CD209Q9NNX6 404 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 SNX24Q9Y343 169 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 DLATP10515 647 aaKnown RBP9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 FBLN1P23142 703 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 FXR2P51116 673 aaKnown RBP eCLIP9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 KRT76Q01546 638 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 GFPT1Q06210 699 aaPredicted RBP9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 TTC8Q8TAM2 541 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 ZNF594Q96JF6 807 aaPredicted RBP9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 RBM12Q9NTZ6 932 aaKnown RBP9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 NCF2P19878 526 aaPredicted RBP9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 STIP1P31948 543 aaKnown RBP9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 TUBA4AP68366 448 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 DNAAF3Q8N9W5 541 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 ZNF555Q8NEP9 628 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 MIEF2Q96C03 454 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 PAGR1Q9BTK6 254 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 BTBD7Q9P203 1132 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 BBOX1O75936 387 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 CFBP00751 764 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 GTF2H1P32780 548 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 XRRA1Q6P2D8 792 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 RFX6Q8HWS3 928 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 NOA1Q8NC60 698 aaKnown RBP9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 ZIM3Q96PE6 472 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 ST7Q9NRC1 585 aa9.31□□□□□ -0.92
SHROOM4-202ENST00000376020 BTNL10A8MVZ5 291 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 GPKOWQ92917 476 aaPredicted RBP eCLIP9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 JAMLQ86YT9 394 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 MRRFQ96E11 262 aaKnown RBP9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 TMBIM4Q9HC24 238 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 DLGAP2Q9P1A6 1054 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 HDAC6Q9UBN7 1215 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 TUBGCP4Q9UGJ1 667 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 GRID1Q9ULK0 1009 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 ZMYND8Q9ULU4 1186 aaPredicted RBP9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 SOX13Q9UN79 622 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 GDAQ9Y2T3 454 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 TRPC5OSA6NMA1 111 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 SERPINI2O75830 405 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 PSMA2P25787 234 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 SLC45A4Q5BKX6 768 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 TRAPPC3LQ5T215 181 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 SPOPLQ6IQ16 392 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 KLHL4Q9C0H6 718 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 PLEKHA4Q9H4M7 779 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 SLC12A6Q9UHW9 1150 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 AP3M1Q9Y2T2 418 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 SHOX2O60902 331 aaPredicted RBP9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 MYL6P60660 151 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 GPS1Q13098 491 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 CERKLQ49MI3 558 aaPredicted RBP9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 TMEM154Q6P9G4 183 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 FUKQ8N0W3 1084 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 SLC24A3Q9HC58 644 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 TMCO1Q9UM00 188 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 MYH14Q7Z406 1995 aaKnown RBP9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 PNMA8CA0A1B0GUJ8 204 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 CLPTM1O96005 669 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 UCHL3P15374 230 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 PABPC4Q13310 644 aaKnown RBP eCLIP9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 CAPRIN1Q14444 709 aaKnown RBP9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 CDR2LQ86X02 465 aaPredicted RBP9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 ZNF577Q9BSK1 485 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 DMAP1Q9NPF5 467 aaPredicted RBP9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 GSTA4O15217 222 aa9.3□□□□□ -0.92
SHROOM4-202ENST00000376020 CCDC15Q0P6D6 951 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms