RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 CYFIP1Q7L576 1253 aa15.61■□□□□ 0.09
MSH5-201ENST00000375703 MCF2L2Q86YR7 1114 aa15.61■□□□□ 0.09
MSH5-201ENST00000375703 CDAN1Q8IWY9 1227 aa15.61■□□□□ 0.09
MSH5-201ENST00000375703 CPXCR1Q8N123 301 aa15.61■□□□□ 0.09
MSH5-201ENST00000375703 PARD3BQ8TEW8 1205 aa15.61■□□□□ 0.09
MSH5-201ENST00000375703 CLEC4DQ8WXI8 215 aa15.61■□□□□ 0.09
MSH5-201ENST00000375703 TMEM109Q9BVC6 243 aa15.61■□□□□ 0.09
MSH5-201ENST00000375703 TIPINQ9BVW5 301 aa15.61■□□□□ 0.09
MSH5-201ENST00000375703 TMEM39BQ9GZU3 492 aa15.61■□□□□ 0.09
MSH5-201ENST00000375703 TBC1D22BQ9NU19 505 aa15.61■□□□□ 0.09
MSH5-201ENST00000375703 EXOC7Q9UPT5 735 aa15.61■□□□□ 0.09
MSH5-201ENST00000375703 RASGRF2O14827 1237 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 RASSF9O75901 435 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 SLCO1A2P46721 670 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 PDE6CP51160 858 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 LLGL1Q15334 1064 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 PPP1R7Q15435 360 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 SIX1Q15475 284 aaPredicted RBP15.6■□□□□ 0.09
MSH5-201ENST00000375703 SPRED3Q2MJR0 410 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 XKR9Q5GH70 373 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 PCNX4Q63HM2 1172 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 RSBN1LQ6PCB5 846 aaPredicted RBP15.6■□□□□ 0.09
MSH5-201ENST00000375703 RNF207Q6ZRF8 634 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 OGFOD1Q8N543 542 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 HELQQ8TDG4 1101 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 EPS8L3Q8TE67 593 aaKnown RBP15.6■□□□□ 0.09
MSH5-201ENST00000375703 ZNF317Q96PQ6 595 aaPredicted RBP15.6■□□□□ 0.09
MSH5-201ENST00000375703 SLC40A1Q9NP59 571 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 INTS9Q9NV88 658 aaKnown RBP15.6■□□□□ 0.09
MSH5-201ENST00000375703 TBX20Q9UMR3 447 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 CNTNAP1P78357 1384 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 ECEL1O95672 775 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 CNGA1P29973 690 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 CALCOCO2Q13137 446 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 UGCGQ16739 394 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 CCDC25Q86WR0 208 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 C4orf19Q8IY42 314 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 SLC17A8Q8NDX2 589 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 ATXN2LQ8WWM7 1075 aaKnown RBP15.6■□□□□ 0.09
MSH5-201ENST00000375703 KIFAP3Q92845 792 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 NT5C1BQ96P26 610 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 TMEM8AQ9HCN3 771 aa15.6■□□□□ 0.09
MSH5-201ENST00000375703 ASTN2O75129 1339 aaPredicted RBP15.6■□□□□ 0.09
MSH5-201ENST00000375703 TBC1D12O60347 775 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 ATP2C2O75185 946 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 RAD17O75943 681 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 GPC3P51654 580 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 LACTB2Q53H82 288 aaPredicted RBP15.59■□□□□ 0.09
MSH5-201ENST00000375703 ACAD10Q6JQN1 1059 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 CCDC197Q8NCU1 140 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 P3H4Q92791 437 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 PLVAPQ9BX97 442 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 STMN4Q9H169 189 aaPredicted RBP15.59■□□□□ 0.09
MSH5-201ENST00000375703 KDM4CQ9H3R0 1056 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 LRRC19Q9H756 370 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 RAB20Q9NX57 234 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 COQ4Q9Y3A0 265 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 CLDN3O15551 220 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 PSMC5P62195 406 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 FBXL13Q8NEE6 735 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 CCT6BQ92526 530 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 TAAR1Q96RJ0 339 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 PRMT1Q99873 361 aaKnown RBP15.59■□□□□ 0.09
MSH5-201ENST00000375703 HOMER2Q9NSB8 354 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 TCEAL9Q9UHQ7 104 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 ZNF646O15015 1829 aaPredicted RBP15.59■□□□□ 0.09
MSH5-201ENST00000375703 PLSCR1O15162 318 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 APBA3O96018 575 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 MYCLP12524 364 aaPredicted RBP15.59■□□□□ 0.09
MSH5-201ENST00000375703 EIF2AK2P19525 551 aaKnown RBP15.59■□□□□ 0.09
MSH5-201ENST00000375703 SCTRP47872 440 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 MCCD1P59942 119 aaPredicted RBP15.59■□□□□ 0.09
MSH5-201ENST00000375703 AUHQ13825 339 aaKnown RBP15.59■□□□□ 0.09
MSH5-201ENST00000375703 SPDYE2Q495Y8 402 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 PLA2G4FQ68DD2 849 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 ANKS4BQ8N8V4 417 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 C12orf50Q8NA57 414 aaPredicted RBP15.59■□□□□ 0.09
MSH5-201ENST00000375703 TMEM161BQ8NDZ6 487 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 TAS1R2Q8TE23 839 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 C1orf54Q8WWF1 131 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 ELMO3Q96BJ8 720 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 CCDC113Q9H0I3 377 aa15.59■□□□□ 0.09
MSH5-201ENST00000375703 ASAP2O43150 1006 aa15.58■□□□□ 0.08
MSH5-201ENST00000375703 DLATP10515 647 aaKnown RBP15.58■□□□□ 0.08
MSH5-201ENST00000375703 NPTX2P47972 431 aa15.58■□□□□ 0.08
MSH5-201ENST00000375703 SNX1Q13596 522 aa15.58■□□□□ 0.08
MSH5-201ENST00000375703 SGO2Q562F6 1265 aa15.58■□□□□ 0.08
MSH5-201ENST00000375703 SYTL5Q8TDW5 730 aaPredicted RBP15.58■□□□□ 0.08
MSH5-201ENST00000375703 PSPC1Q8WXF1 523 aaKnown RBP15.58■□□□□ 0.08
MSH5-201ENST00000375703 DDX1Q92499 740 aaKnown RBP15.58■□□□□ 0.08
MSH5-201ENST00000375703 HVCN1Q96D96 273 aa15.58■□□□□ 0.08
MSH5-201ENST00000375703 KIFC3Q9BVG8 833 aa15.58■□□□□ 0.08
MSH5-201ENST00000375703 ZNF341Q9BYN7 854 aa15.58■□□□□ 0.08
MSH5-201ENST00000375703 ROPN1BQ9BZX4 212 aaPredicted RBP15.58■□□□□ 0.08
MSH5-201ENST00000375703 ROPN1Q9HAT0 212 aaPredicted RBP15.58■□□□□ 0.08
MSH5-201ENST00000375703 TOPORSQ9NS56 1045 aaPredicted RBP15.58■□□□□ 0.08
MSH5-201ENST00000375703 FSCN2O14926 492 aa15.58■□□□□ 0.08
MSH5-201ENST00000375703 C21orf2O43822 256 aa15.58■□□□□ 0.08
MSH5-201ENST00000375703 GRIN3BO60391 1043 aa15.58■□□□□ 0.08
MSH5-201ENST00000375703 ATP9AO75110 1047 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms