RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 LRMDAQ9H2I8 198 aa13□□□□□ -0.33
C9orf3-203ENST00000375315 TMEM165Q9HC07 324 aa13□□□□□ -0.33
C9orf3-203ENST00000375315 PREBQ9HCU5 417 aa13□□□□□ -0.33
C9orf3-203ENST00000375315 CENPFP49454 3210 aa13□□□□□ -0.33
C9orf3-203ENST00000375315 MYH4Q9Y623 1939 aa13□□□□□ -0.33
C9orf3-203ENST00000375315 DDX39AO00148 427 aaKnown RBP13□□□□□ -0.33
C9orf3-203ENST00000375315 FGFR1OPO95684 399 aaKnown RBP13□□□□□ -0.33
C9orf3-203ENST00000375315 OR52Z1P0C646 297 aa13□□□□□ -0.33
C9orf3-203ENST00000375315 VHLP40337 213 aa13□□□□□ -0.33
C9orf3-203ENST00000375315 PDE4DQ08499 809 aa13□□□□□ -0.33
C9orf3-203ENST00000375315 CCDC6Q16204 474 aa13□□□□□ -0.33
C9orf3-203ENST00000375315 FOXB2Q5VYV0 432 aa13□□□□□ -0.33
C9orf3-203ENST00000375315 RNF43Q68DV7 783 aa13□□□□□ -0.33
C9orf3-203ENST00000375315 LZICQ8WZA0 190 aa13□□□□□ -0.33
C9orf3-203ENST00000375315 ZNF333Q96JL9 665 aa13□□□□□ -0.33
C9orf3-203ENST00000375315 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13□□□□□ -0.334e-6■■■□□ 18.4
C9orf3-203ENST00000375315 ANO3Q9BYT9 981 aa13□□□□□ -0.33
C9orf3-203ENST00000375315 TRIM31Q9BZY9 425 aa13□□□□□ -0.33
C9orf3-203ENST00000375315 DDX25Q9UHL0 483 aaKnown RBP13□□□□□ -0.33
C9orf3-203ENST00000375315 CCPG1Q9ULG6 757 aa13□□□□□ -0.33
C9orf3-203ENST00000375315 GMEB1Q9Y692 573 aa13□□□□□ -0.33
C9orf3-203ENST00000375315 H0Y3Z8 333 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 SETDB1Q15047 1291 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 SLC18A3Q16572 532 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 BTNL9Q6UXG8 535 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 VSIG1Q86XK7 387 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 SYN2Q92777 582 aaPredicted RBP12.99□□□□□ -0.33
C9orf3-203ENST00000375315 NUDT12Q9BQG2 462 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 RPAP3Q9H6T3 665 aaPredicted RBP12.99□□□□□ -0.33
C9orf3-203ENST00000375315 DCLRE1BQ9H816 532 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 RIC8AQ9NPQ8 531 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 SH2D4BQ5SQS7 431 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 PHC3Q8NDX5 983 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 FAM13CQ8NE31 585 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 CFAP61Q8NHU2 1237 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 GMCL1Q96IK5 515 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 PGAP2Q9UHJ9 254 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 HGSO14964 777 aaPredicted RBP12.99□□□□□ -0.33
C9orf3-203ENST00000375315 FKBP1CQ5VVH2 108 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 DYMQ7RTS9 669 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 LDHDQ86WU2 507 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 C4orf32Q8N8J7 132 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 GMCL1P1Q8NEA9 526 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 LRRC8CQ8TDW0 803 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 CHURC1Q8WUH1 139 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 HPS3Q969F9 1004 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 CLMNQ96JQ2 1002 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 ZHX3Q9H4I2 956 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 NMRK1Q9NWW6 199 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 LARSQ9P2J5 1176 aaKnown RBP12.99□□□□□ -0.33
C9orf3-203ENST00000375315 PRKAG3Q9UGI9 489 aa12.99□□□□□ -0.33
C9orf3-203ENST00000375315 RPL26L1Q9UNX3 145 aaKnown RBP12.99□□□□□ -0.33
C9orf3-203ENST00000375315 FAM200BP0CF97 657 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 CACNB1Q02641 598 aaPredicted RBP12.98□□□□□ -0.33
C9orf3-203ENST00000375315 DCAF15Q66K64 600 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 METTL13Q8N6R0 699 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 MGARPQ8TDB4 240 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 INPP5DQ92835 1189 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 ATG4CQ96DT6 458 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 OTUD5Q96G74 571 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 CDK5RAP3Q96JB5 506 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 TMEM237Q96Q45 408 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 IWS1Q96ST2 819 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 CELF4Q9BZC1 486 aaKnown RBP12.98□□□□□ -0.33
C9orf3-203ENST00000375315 ELP3Q9H9T3 547 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 NLRC4Q9NPP4 1024 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 ABCB11O95342 1321 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 NFIBO00712 420 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 MEIS2O14770 477 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 ATP9AO75110 1047 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 AFPP02771 609 aaKnown RBP12.98□□□□□ -0.33
C9orf3-203ENST00000375315 VCAM1P19320 739 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 CYP4A11Q02928 519 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 LRRC14Q15048 493 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 NAALADL2Q58DX5 795 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 MAP1SQ66K74 1059 aaPredicted RBP12.98□□□□□ -0.33
C9orf3-203ENST00000375315 CEP128Q6ZU80 1094 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 DAAM2Q86T65 1068 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 CABP7Q86V35 215 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 ATP8B4Q8TF62 1192 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 RMDN2Q96LZ7 410 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 TMEM109Q9BVC6 243 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 CARD9Q9H257 536 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 EPB41L4BQ9H329 900 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 OCEL1Q9H607 264 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 KBTBD4Q9NVX7 518 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 POLR2AP24928 1970 aaKnown RBP12.98□□□□□ -0.33
C9orf3-203ENST00000375315 MROH7Q68CQ1 1323 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 LTBP3Q9NS15 1303 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 SIPA1L1O43166 1804 aa12.98□□□□□ -0.33
C9orf3-203ENST00000375315 BTNL10A8MVZ5 291 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 SMAPO00193 183 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 MEIS1O00470 390 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 RASGRF2O14827 1237 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 EDIL3O43854 480 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 PFDN1O60925 122 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 TJP3O95049 919 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 ITGA4P13612 1032 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 PLCG1P19174 1290 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 NT5C2P49902 561 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms