RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 MEFVO15553 781 aaPredicted RBP17.03■□□□□ 0.32
NIPAL3-204ENST00000374399 TSPAN1O60635 241 aa17.03■□□□□ 0.32
NIPAL3-204ENST00000374399 LDHAP00338 332 aaKnown RBP17.03■□□□□ 0.32
NIPAL3-204ENST00000374399 HARSP12081 509 aaKnown RBP17.03■□□□□ 0.32
NIPAL3-204ENST00000374399 ARF4P18085 180 aaPredicted RBP17.03■□□□□ 0.32
NIPAL3-204ENST00000374399 CST5P28325 142 aaPredicted RBP17.03■□□□□ 0.32
NIPAL3-204ENST00000374399 GTF2H1P32780 548 aa17.03■□□□□ 0.32
NIPAL3-204ENST00000374399 MAP2K1Q02750 393 aaPredicted RBP17.03■□□□□ 0.32
NIPAL3-204ENST00000374399 NBPF20Q3BBV1 942 aa17.03■□□□□ 0.32
NIPAL3-204ENST00000374399 SV2AQ7L0J3 742 aa17.03■□□□□ 0.32
NIPAL3-204ENST00000374399 CEP120Q8N960 986 aa17.03■□□□□ 0.32
NIPAL3-204ENST00000374399 ACRBPQ8NEB7 543 aa17.03■□□□□ 0.32
NIPAL3-204ENST00000374399 RAET1EQ8TD07 263 aa17.03■□□□□ 0.32
NIPAL3-204ENST00000374399 DNAJB3Q8WWF6 145 aa17.03■□□□□ 0.32
NIPAL3-204ENST00000374399 CDT1Q9H211 546 aa17.03■□□□□ 0.32
NIPAL3-204ENST00000374399 PDZD7Q9H5P4 517 aa17.03■□□□□ 0.32
NIPAL3-204ENST00000374399 RBAKQ9NYW8 714 aaPredicted RBP17.03■□□□□ 0.32
NIPAL3-204ENST00000374399 AIPL1Q9NZN9 384 aa17.03■□□□□ 0.32
NIPAL3-204ENST00000374399 TSKSQ9UJT2 592 aa17.03■□□□□ 0.32
NIPAL3-204ENST00000374399 CPSF3Q9UKF6 684 aaKnown RBP17.03■□□□□ 0.32
NIPAL3-204ENST00000374399 OGTO15294 1046 aa17.02■□□□□ 0.32
NIPAL3-204ENST00000374399 ZEB2O60315 1214 aa17.02■□□□□ 0.32
NIPAL3-204ENST00000374399 N4BP1O75113 896 aaKnown RBP17.02■□□□□ 0.32
NIPAL3-204ENST00000374399 DLATP10515 647 aaKnown RBP17.02■□□□□ 0.32
NIPAL3-204ENST00000374399 FGFR4P22455 802 aa17.02■□□□□ 0.32
NIPAL3-204ENST00000374399 MATR3P43243 847 aaKnown RBP eCLIP17.02■□□□□ 0.32
NIPAL3-204ENST00000374399 KCNA10Q16322 511 aa17.02■□□□□ 0.32
NIPAL3-204ENST00000374399 ASTE1Q2TB18 679 aaPredicted RBP17.02■□□□□ 0.32
NIPAL3-204ENST00000374399 LMBRD2Q68DH5 695 aaPredicted RBP17.02■□□□□ 0.32
NIPAL3-204ENST00000374399 KRT39Q6A163 491 aa17.02■□□□□ 0.32
NIPAL3-204ENST00000374399 SCARA3Q6AZY7 606 aa17.02■□□□□ 0.32
NIPAL3-204ENST00000374399 SRGAP1Q7Z6B7 1085 aa17.02■□□□□ 0.32
NIPAL3-204ENST00000374399 BRSK2Q8IWQ3 736 aa17.02■□□□□ 0.32
NIPAL3-204ENST00000374399 C7orf31Q8N865 590 aa17.02■□□□□ 0.32
NIPAL3-204ENST00000374399 TAS1R2Q8TE23 839 aa17.02■□□□□ 0.32
NIPAL3-204ENST00000374399 CPB2Q96IY4 423 aa17.02■□□□□ 0.32
NIPAL3-204ENST00000374399 PRIMPOLQ96LW4 560 aa17.02■□□□□ 0.32
NIPAL3-204ENST00000374399 NHEJ1Q9H9Q4 299 aaPredicted RBP17.02■□□□□ 0.32
NIPAL3-204ENST00000374399 APEX2Q9UBZ4 518 aa17.02■□□□□ 0.32
NIPAL3-204ENST00000374399 DDX20Q9UHI6 824 aaKnown RBP17.02■□□□□ 0.32
NIPAL3-204ENST00000374399 GTF2IRD1Q9UHL9 959 aa17.02■□□□□ 0.32
NIPAL3-204ENST00000374399 EPN1Q9Y6I3 576 aaPredicted RBP17.02■□□□□ 0.32
NIPAL3-204ENST00000374399 ZNF263O14978 683 aa17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 NDUFA10O95299 355 aa17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 C4BPAP04003 597 aaKnown RBP17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 ASGR1P07306 291 aa17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 IRF2BP2Q7Z5L9 587 aa17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 ARHGEF19Q8IW93 802 aa17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 TMEM192Q8IY95 271 aa17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 TMEM40Q8WWA1 233 aa17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 WNT8BQ93098 351 aa17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 TCHPQ9BT92 498 aa17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 SPC25Q9HBM1 224 aa17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 INHAP05111 366 aa17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 PNMA6AP0CW24 399 aaPredicted RBP17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 HOXA11P31270 313 aaPredicted RBP17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 TSR1Q2NL82 804 aaKnown RBP17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 ZNF568Q3ZCX4 644 aa17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 ZACNQ401N2 412 aa17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 SFMBT2Q5VUG0 894 aa17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 TDRD10Q5VZ19 366 aaKnown RBP17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 LHX8Q68G74 356 aa17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 GDF6Q6KF10 455 aaPredicted RBP17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 OSMRQ99650 979 aa17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 NUCKS1Q9H1E3 243 aaKnown RBP17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 DNAJC12Q9UKB3 198 aa17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 MYO6Q9UM54 1294 aa17.01■□□□□ 0.31
NIPAL3-204ENST00000374399 A0A1B0GUA9 196 aa17■□□□□ 0.31
NIPAL3-204ENST00000374399 VNN1O95497 513 aa17■□□□□ 0.31
NIPAL3-204ENST00000374399 ABL1P00519 1130 aa17■□□□□ 0.31
NIPAL3-204ENST00000374399 EIF4A3P38919 411 aaKnown RBP17■□□□□ 0.31
NIPAL3-204ENST00000374399 MAPK8IP2Q13387 824 aaPredicted RBP17■□□□□ 0.31
NIPAL3-204ENST00000374399 RAPGEF1Q13905 1077 aa17■□□□□ 0.31
NIPAL3-204ENST00000374399 ENOX2Q16206 610 aaKnown RBP17■□□□□ 0.31
NIPAL3-204ENST00000374399 OR5B17Q8NGF7 314 aa17■□□□□ 0.31
NIPAL3-204ENST00000374399 OLIG1Q8TAK6 271 aa17■□□□□ 0.31
NIPAL3-204ENST00000374399 KAT5Q92993 513 aa17■□□□□ 0.31
NIPAL3-204ENST00000374399 ELMO3Q96BJ8 720 aa17■□□□□ 0.31
NIPAL3-204ENST00000374399 C16orf45Q96MC5 204 aaPredicted RBP17■□□□□ 0.31
NIPAL3-204ENST00000374399 CGRRF1Q99675 332 aa17■□□□□ 0.31
NIPAL3-204ENST00000374399 STK33Q9BYT3 514 aa17■□□□□ 0.31
NIPAL3-204ENST00000374399 ZNHIT6Q9NWK9 470 aaKnown RBP17■□□□□ 0.31
NIPAL3-204ENST00000374399 DARSP14868 501 aaKnown RBP16.99■□□□□ 0.31
NIPAL3-204ENST00000374399 CDC42EP1Q00587 391 aa16.99■□□□□ 0.31
NIPAL3-204ENST00000374399 SESTD1Q86VW0 696 aa16.99■□□□□ 0.31
NIPAL3-204ENST00000374399 THNSL1Q8IYQ7 743 aa16.99■□□□□ 0.31
NIPAL3-204ENST00000374399 CCDC170Q8IYT3 715 aa16.99■□□□□ 0.31
NIPAL3-204ENST00000374399 FBXL13Q8NEE6 735 aa16.99■□□□□ 0.31
NIPAL3-204ENST00000374399 PTCH2Q9Y6C5 1203 aa16.99■□□□□ 0.31
NIPAL3-204ENST00000374399 F8VZ95 297 aa16.99■□□□□ 0.31
NIPAL3-204ENST00000374399 OFD1O75665 1012 aa16.99■□□□□ 0.31
NIPAL3-204ENST00000374399 LCA5LO95447 670 aa16.99■□□□□ 0.31
NIPAL3-204ENST00000374399 CCDC175P0C221 793 aa16.99■□□□□ 0.31
NIPAL3-204ENST00000374399 MCF2P10911 925 aa16.99■□□□□ 0.31
NIPAL3-204ENST00000374399 GNAT1P11488 350 aa16.99■□□□□ 0.31
NIPAL3-204ENST00000374399 ARHGAP25P42331 645 aa16.99■□□□□ 0.31
NIPAL3-204ENST00000374399 DRAP1Q14919 205 aaPredicted RBP16.99■□□□□ 0.31
NIPAL3-204ENST00000374399 USP37Q86T82 979 aa16.99■□□□□ 0.31
NIPAL3-204ENST00000374399 SLAIN1Q8ND83 568 aa16.99■□□□□ 0.31
NIPAL3-204ENST00000374399 HELQQ8TDG4 1101 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms