RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 TRIM49CP0CI26 452 aa10.52□□□□□ -0.72
PTPN20-202ENST00000374339 ARF4P18085 180 aaPredicted RBP10.52□□□□□ -0.72
PTPN20-202ENST00000374339 RFX1P22670 979 aa10.52□□□□□ -0.72
PTPN20-202ENST00000374339 CTCFP49711 727 aaPredicted RBP10.52□□□□□ -0.72
PTPN20-202ENST00000374339 ACOT2P49753 483 aa10.52□□□□□ -0.72
PTPN20-202ENST00000374339 AP3M2P53677 418 aa10.52□□□□□ -0.72
PTPN20-202ENST00000374339 CLDN10P78369 228 aa10.52□□□□□ -0.72
PTPN20-202ENST00000374339 ZBED6P86452 979 aa10.52□□□□□ -0.72
PTPN20-202ENST00000374339 SNX17Q15036 470 aa10.52□□□□□ -0.72
PTPN20-202ENST00000374339 PTPN21Q16825 1174 aa10.52□□□□□ -0.72
PTPN20-202ENST00000374339 DCAF4L1Q3SXM0 396 aa10.52□□□□□ -0.72
PTPN20-202ENST00000374339 IER5LQ5T953 404 aa10.52□□□□□ -0.72
PTPN20-202ENST00000374339 NOTUMQ6P988 496 aa10.52□□□□□ -0.72
PTPN20-202ENST00000374339 ZBTB33Q86T24 672 aa10.52□□□□□ -0.72
PTPN20-202ENST00000374339 SLC43A3Q8NBI5 491 aa10.52□□□□□ -0.72
PTPN20-202ENST00000374339 CACTINQ8WUQ7 758 aaKnown RBP10.52□□□□□ -0.72
PTPN20-202ENST00000374339 CPLX3Q8WVH0 158 aa10.52□□□□□ -0.72
PTPN20-202ENST00000374339 CCDC127Q96BQ5 260 aa10.52□□□□□ -0.72
PTPN20-202ENST00000374339 OSMRQ99650 979 aa10.52□□□□□ -0.72
PTPN20-202ENST00000374339 NAA15Q9BXJ9 866 aaKnown RBP10.52□□□□□ -0.72
PTPN20-202ENST00000374339 HAPLN2Q9GZV7 340 aa10.52□□□□□ -0.72
PTPN20-202ENST00000374339 PDZD7Q9H5P4 517 aa10.52□□□□□ -0.72
PTPN20-202ENST00000374339 FAM207AQ9NSI2 230 aaPredicted RBP10.52□□□□□ -0.72
PTPN20-202ENST00000374339 GCNT4Q9P109 453 aa10.52□□□□□ -0.72
PTPN20-202ENST00000374339 USP20Q9Y2K6 914 aa10.52□□□□□ -0.72
PTPN20-202ENST00000374339 TRPV2Q9Y5S1 764 aa10.52□□□□□ -0.72
PTPN20-202ENST00000374339 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.52□□□□□ -0.72
PTPN20-202ENST00000374339 GRIN2DO15399 1336 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 TTC26A0AVF1 554 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 FAM189A1O60320 539 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 CSDE1O75534 798 aaKnown RBP10.52□□□□□ -0.73
PTPN20-202ENST00000374339 IL18RAPO95256 599 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 CLTAP09496 248 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 DLATP10515 647 aaKnown RBP10.52□□□□□ -0.73
PTPN20-202ENST00000374339 HSPA8P11142 646 aaKnown RBP10.52□□□□□ -0.73
PTPN20-202ENST00000374339 HARSP12081 509 aaKnown RBP10.52□□□□□ -0.73
PTPN20-202ENST00000374339 KRT9P35527 623 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 MXI1P50539 228 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 FXR1P51114 621 aaKnown RBP eCLIP10.52□□□□□ -0.73
PTPN20-202ENST00000374339 ADKP55263 362 aaKnown RBP10.52□□□□□ -0.73
PTPN20-202ENST00000374339 KCNMA1Q12791 1236 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 KRT39Q6A163 491 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 SLC27A1Q6PCB7 646 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 CRELD2Q6UXH1 353 aaPredicted RBP10.52□□□□□ -0.73
PTPN20-202ENST00000374339 CACNA2D4Q7Z3S7 1137 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 ZSCAN30Q86W11 494 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 FMNL3Q8IVF7 1028 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 BRSK2Q8IWQ3 736 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 CCDC155Q8N6L0 562 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 TC2NQ8N9U0 490 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 ZSWIM2Q8NEG5 633 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 OR8K1Q8NGG5 319 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 DEFB118Q96PH6 123 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 DNAJC7Q99615 494 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 CGRRF1Q99675 332 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 CRACR2AQ9BSW2 395 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 LSM14BQ9BX40 385 aaKnown RBP10.52□□□□□ -0.73
PTPN20-202ENST00000374339 TTYH3Q9C0H2 523 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 CDT1Q9H211 546 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 TMEM8AQ9HCN3 771 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 ABHD10Q9NUJ1 306 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 AGPAT5Q9NUQ2 364 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 ZNHIT6Q9NWK9 470 aaKnown RBP10.52□□□□□ -0.73
PTPN20-202ENST00000374339 CEP72Q9P209 647 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 FBXL5Q9UKA1 691 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 CPSF3Q9UKF6 684 aaKnown RBP10.52□□□□□ -0.73
PTPN20-202ENST00000374339 OGDHLQ9ULD0 1010 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 ZKSCAN5Q9Y2L8 839 aa10.52□□□□□ -0.73
PTPN20-202ENST00000374339 HTTP42858 3142 aa10.51□□□□□ -0.73
PTPN20-202ENST00000374339 LRRIQ3A6PVS8 624 aaPredicted RBP10.51□□□□□ -0.73
PTPN20-202ENST00000374339 ARVCFO00192 962 aa10.51□□□□□ -0.73
PTPN20-202ENST00000374339 SKILP12757 684 aa10.51□□□□□ -0.73
PTPN20-202ENST00000374339 CAPN2P17655 700 aa10.51□□□□□ -0.73
PTPN20-202ENST00000374339 TNNI1P19237 187 aa10.51□□□□□ -0.73
PTPN20-202ENST00000374339 MSNP26038 577 aaKnown RBP10.51□□□□□ -0.73
PTPN20-202ENST00000374339 PON1P27169 355 aa10.51□□□□□ -0.73
PTPN20-202ENST00000374339 THPOP40225 353 aa10.51□□□□□ -0.73
PTPN20-202ENST00000374339 GCLMP48507 274 aa10.51□□□□□ -0.73
PTPN20-202ENST00000374339 DLG4P78352 724 aa10.51□□□□□ -0.73
PTPN20-202ENST00000374339 ARID5BQ14865 1188 aa10.51□□□□□ -0.73
PTPN20-202ENST00000374339 CBWD6Q4V339 395 aa10.51□□□□□ -0.73
PTPN20-202ENST00000374339 CBWD3Q5JTY5 395 aa10.51□□□□□ -0.73
PTPN20-202ENST00000374339 CBWD5Q5RIA9 395 aa10.51□□□□□ -0.73
PTPN20-202ENST00000374339 TRIM65Q6PJ69 517 aa10.51□□□□□ -0.73
PTPN20-202ENST00000374339 WDR49Q8IV35 697 aa10.51□□□□□ -0.73
PTPN20-202ENST00000374339 THNSL1Q8IYQ7 743 aa10.51□□□□□ -0.73
PTPN20-202ENST00000374339 USP38Q8NB14 1042 aa10.51□□□□□ -0.73
PTPN20-202ENST00000374339 FBXL13Q8NEE6 735 aa10.51□□□□□ -0.73
PTPN20-202ENST00000374339 CPB2Q96IY4 423 aa10.51□□□□□ -0.73
PTPN20-202ENST00000374339 BAG1Q99933 345 aaPredicted RBP10.51□□□□□ -0.73
PTPN20-202ENST00000374339 SENP6Q9GZR1 1112 aaPredicted RBP10.51□□□□□ -0.73
PTPN20-202ENST00000374339 KCNF1Q9H3M0 494 aa10.51□□□□□ -0.73
PTPN20-202ENST00000374339 RPF1Q9H9Y2 349 aaKnown RBP10.51□□□□□ -0.73
PTPN20-202ENST00000374339 CDHR5Q9HBB8 845 aa10.51□□□□□ -0.73
PTPN20-202ENST00000374339 MYO6Q9UM54 1294 aa10.51□□□□□ -0.73
PTPN20-202ENST00000374339 COQ4Q9Y3A0 265 aa10.51□□□□□ -0.73
PTPN20-202ENST00000374339 CDY2AQ9Y6F7 541 aa10.51□□□□□ -0.73
PTPN20-202ENST00000374339 MROH7Q68CQ1 1323 aa10.5□□□□□ -0.73
PTPN20-202ENST00000374339 GPR182O15218 404 aa10.5□□□□□ -0.73
PTPN20-202ENST00000374339 ARHGAP6O43182 974 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms