RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 CLTBP09497 229 aa15.48■□□□□ 0.07
HMGA1-203ENST00000374116 CTSHP09668 335 aa15.48■□□□□ 0.07
HMGA1-203ENST00000374116 VAV2P52735 878 aa15.48■□□□□ 0.07
HMGA1-203ENST00000374116 MKRN4PQ13434 485 aaPredicted RBP15.48■□□□□ 0.07
HMGA1-203ENST00000374116 SFR1Q86XK3 245 aa15.48■□□□□ 0.07
HMGA1-203ENST00000374116 NELFCDQ8IXH7 590 aa15.48■□□□□ 0.07
HMGA1-203ENST00000374116 PDE11AQ9HCR9 933 aa15.48■□□□□ 0.07
HMGA1-203ENST00000374116 GPRC5CQ9NQ84 441 aa15.48■□□□□ 0.07
HMGA1-203ENST00000374116 PDLIM7Q9NR12 457 aa15.48■□□□□ 0.07
HMGA1-203ENST00000374116 OLFML3Q9NRN5 406 aa15.48■□□□□ 0.07
HMGA1-203ENST00000374116 TMEM39AQ9NV64 488 aa15.48■□□□□ 0.07
HMGA1-203ENST00000374116 PUF60Q9UHX1 559 aaKnown RBP15.48■□□□□ 0.07
HMGA1-203ENST00000374116 ARHGEF35A5YM69 484 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 RRN3P2A6NIE6 340 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 RSPH10B2B2RC85 870 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 EPHB6O15197 1021 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 KIF1CO43896 1103 aaKnown RBP15.47■□□□□ 0.07
HMGA1-203ENST00000374116 VTNP04004 478 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 RSPH10BP0C881 870 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 GNAT1P11488 350 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 THPOP40225 353 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 POLGP54098 1239 aaPredicted RBP15.47■□□□□ 0.07
HMGA1-203ENST00000374116 KIF5AQ12840 1032 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 PADI6Q6TGC4 694 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 LRRC31Q6UY01 552 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 TADA2BQ86TJ2 420 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 SERINC5Q86VE9 423 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 KSR1Q8IVT5 923 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 TRIM59Q8IWR1 403 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 BAP1Q92560 729 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 HTATIP2Q9BUP3 242 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 OSBPL7Q9BZF2 842 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 EPC1Q9H2F5 836 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 ZHX3Q9H4I2 956 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 KCND2Q9NZV8 630 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 GINS2Q9Y248 185 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 CTAGE15A4D2H0 777 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 CETN3O15182 167 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 TLR3O15455 904 aaKnown RBP15.47■□□□□ 0.07
HMGA1-203ENST00000374116 CTAGE8P0CG41 777 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 GAP43P17677 238 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 CYP2C18P33260 490 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 ZNF131P52739 623 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 CCL23P55773 120 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 PTPN11Q06124 597 aaPredicted RBP15.47■□□□□ 0.07
HMGA1-203ENST00000374116 KCNMA1Q12791 1236 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 ADAM9Q13443 819 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 KNOP1Q1ED39 458 aaKnown RBP15.47■□□□□ 0.07
HMGA1-203ENST00000374116 PAPD7Q5XG87 772 aaKnown RBP15.47■□□□□ 0.07
HMGA1-203ENST00000374116 PDXDC1Q6P996 788 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 RRAGAQ7L523 313 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 TRAPPC11Q7Z392 1133 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 CACNA2D4Q7Z3S7 1137 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 CTAGE6Q86UF2 777 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 CTAGE4Q8IX94 777 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 SYN2Q92777 582 aaPredicted RBP15.47■□□□□ 0.07
HMGA1-203ENST00000374116 SCLYQ96I15 445 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 TOX2Q96NM4 488 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 ACBD3Q9H3P7 528 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 ANKZF1Q9H8Y5 726 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 XPNPEP1Q9NQW7 623 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 ANKEF1Q9NU02 776 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 CEP72Q9P209 647 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 ARHGAP20Q9P2F6 1191 aa15.47■□□□□ 0.07
HMGA1-203ENST00000374116 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.47■□□□□ 0.07
HMGA1-203ENST00000374116 ANO9A1A5B4 782 aa15.46■□□□□ 0.07
HMGA1-203ENST00000374116 LRRC53A6NM62 1247 aa15.46■□□□□ 0.07
HMGA1-203ENST00000374116 CCDC172P0C7W6 258 aa15.46■□□□□ 0.07
HMGA1-203ENST00000374116 EMC2Q15006 297 aa15.46■□□□□ 0.07
HMGA1-203ENST00000374116 ZNF618Q5T7W0 954 aa15.46■□□□□ 0.07
HMGA1-203ENST00000374116 KIAA0319LQ8IZA0 1049 aa15.46■□□□□ 0.07
HMGA1-203ENST00000374116 FIZ1Q96SL8 496 aa15.46■□□□□ 0.07
HMGA1-203ENST00000374116 TACO1Q9BSH4 297 aaKnown RBP15.46■□□□□ 0.07
HMGA1-203ENST00000374116 LACRTQ9GZZ8 138 aa15.46■□□□□ 0.07
HMGA1-203ENST00000374116 HIPK3Q9H422 1215 aa15.46■□□□□ 0.07
HMGA1-203ENST00000374116 DHX33Q9H6R0 707 aaKnown RBP15.46■□□□□ 0.07
HMGA1-203ENST00000374116 VIPAS39Q9H9C1 493 aa15.46■□□□□ 0.07
HMGA1-203ENST00000374116 CDHR5Q9HBB8 845 aa15.46■□□□□ 0.07
HMGA1-203ENST00000374116 DONSONQ9NYP3 566 aa15.46■□□□□ 0.07
HMGA1-203ENST00000374116 DBR1Q9UK59 544 aaKnown RBP15.46■□□□□ 0.07
HMGA1-203ENST00000374116 COL1A2P08123 1366 aa15.46■□□□□ 0.06
HMGA1-203ENST00000374116 RCCD1A6NED2 376 aa15.45■□□□□ 0.06
HMGA1-203ENST00000374116 SFI1A8K8P3 1242 aa15.45■□□□□ 0.06
HMGA1-203ENST00000374116 PDXKO00764 312 aa15.45■□□□□ 0.06
HMGA1-203ENST00000374116 CALUO43852 315 aaPredicted RBP15.45■□□□□ 0.06
HMGA1-203ENST00000374116 MAFO75444 373 aaPredicted RBP15.45■□□□□ 0.06
HMGA1-203ENST00000374116 EIF4A3P38919 411 aaKnown RBP15.45■□□□□ 0.06
HMGA1-203ENST00000374116 KIF11P52732 1056 aa15.45■□□□□ 0.06
HMGA1-203ENST00000374116 CYP27A1Q02318 531 aa15.45■□□□□ 0.06
HMGA1-203ENST00000374116 PTK7Q13308 1070 aa15.45■□□□□ 0.06
HMGA1-203ENST00000374116 TRIM71Q2Q1W2 868 aaKnown RBP15.45■□□□□ 0.06
HMGA1-203ENST00000374116 SLC7A3Q8WY07 619 aa15.45■□□□□ 0.06
HMGA1-203ENST00000374116 DRC1Q96MC2 740 aa15.45■□□□□ 0.06
HMGA1-203ENST00000374116 TBX21Q9UL17 535 aa15.45■□□□□ 0.06
HMGA1-203ENST00000374116 AKT3Q9Y243 479 aa15.45■□□□□ 0.06
HMGA1-203ENST00000374116 CEP83Q9Y592 693 aa15.45■□□□□ 0.06
HMGA1-203ENST00000374116 PCDHA13Q9Y5I0 950 aa15.45■□□□□ 0.06
HMGA1-203ENST00000374116 SAR1BQ9Y6B6 198 aa15.45■□□□□ 0.06
HMGA1-203ENST00000374116 LOXHD1Q8IVV2 1947 aa15.45■□□□□ 0.06
HMGA1-203ENST00000374116 SCN5AQ14524 2016 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms