RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 SLFN11Q7Z7L1 901 aa21.14■□□□□ 0.97
HDAC1-201ENST00000373548 ANKRD23Q86SG2 305 aa21.14■□□□□ 0.97
HDAC1-201ENST00000373548 RPUSD2Q8IZ73 545 aaKnown RBP21.14■□□□□ 0.97
HDAC1-201ENST00000373548 TCP11Q8WWU5 503 aa21.14■□□□□ 0.97
HDAC1-201ENST00000373548 RFFLQ8WZ73 363 aa21.14■□□□□ 0.97
HDAC1-201ENST00000373548 FNBP1Q96RU3 617 aa21.14■□□□□ 0.97
HDAC1-201ENST00000373548 PI4K2AQ9BTU6 479 aa21.14■□□□□ 0.97
HDAC1-201ENST00000373548 CCDC113Q9H0I3 377 aa21.14■□□□□ 0.97
HDAC1-201ENST00000373548 MORF4L1Q9UBU8 362 aa21.14■□□□□ 0.97
HDAC1-201ENST00000373548 CHRNB2P17787 502 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 ABCB4P21439 1286 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 PAFAH1B1P43034 410 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 SLC26A2P50443 739 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 ARHGAP1Q07960 439 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 CDCA2Q69YH5 1023 aaPredicted RBP21.13■□□□□ 0.97
HDAC1-201ENST00000373548 TAPT1Q6NXT6 567 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 NOP9Q86U38 636 aaKnown RBP21.13■□□□□ 0.97
HDAC1-201ENST00000373548 TRAPPC12Q8WVT3 735 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 CTNNBL1Q8WYA6 563 aaPredicted RBP21.13■□□□□ 0.97
HDAC1-201ENST00000373548 RBAKQ9NYW8 714 aaPredicted RBP21.13■□□□□ 0.97
HDAC1-201ENST00000373548 PTPRJQ12913 1337 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 FAM170AA1A519 330 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 TARSL2A2RTX5 802 aaKnown RBP21.13■□□□□ 0.97
HDAC1-201ENST00000373548 ATP8B1O43520 1251 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 MSCO60682 206 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 SASH3O75995 380 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 KIF4AO95239 1232 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 LDHAP00338 332 aaKnown RBP21.13■□□□□ 0.97
HDAC1-201ENST00000373548 MATR3P43243 847 aaKnown RBP eCLIP21.13■□□□□ 0.97
HDAC1-201ENST00000373548 GCLCP48506 637 aaPredicted RBP21.13■□□□□ 0.97
HDAC1-201ENST00000373548 EFNA5P52803 228 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 RPS6KA1Q15418 735 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 ZACNQ401N2 412 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 BEND6Q5SZJ8 279 aaPredicted RBP21.13■□□□□ 0.97
HDAC1-201ENST00000373548 GJC2Q5T442 439 aaPredicted RBP21.13■□□□□ 0.97
HDAC1-201ENST00000373548 ZPBP2Q6X784 338 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 SLC47A2Q86VL8 602 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 EXOC8Q8IYI6 725 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 SLC35G2Q8TBE7 412 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 ARHGEF26Q96DR7 871 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 ABCB6Q9NP58 842 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 OSGEPQ9NPF4 335 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 ACP6Q9NPH0 428 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 RNF14Q9UBS8 474 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 TRPC6Q9Y210 931 aa21.13■□□□□ 0.97
HDAC1-201ENST00000373548 ANKRD62A6NC57 917 aa21.12■□□□□ 0.97
HDAC1-201ENST00000373548 ZC3H11AO75152 810 aaKnown RBP eCLIP21.12■□□□□ 0.973e-6■■□□□ 13.5
HDAC1-201ENST00000373548 C4BPAP04003 597 aaKnown RBP21.12■□□□□ 0.97
HDAC1-201ENST00000373548 SRGAP2CP0DJJ0 459 aa21.12■□□□□ 0.97
HDAC1-201ENST00000373548 TNNI1P19237 187 aa21.12■□□□□ 0.97
HDAC1-201ENST00000373548 MXD4Q14582 209 aaPredicted RBP21.12■□□□□ 0.97
HDAC1-201ENST00000373548 CFAP221Q4G0U5 840 aa21.12■□□□□ 0.97
HDAC1-201ENST00000373548 LMBR1Q8WVP7 490 aa21.12■□□□□ 0.97
HDAC1-201ENST00000373548 PCDHB18PQ96TA0 734 aa21.12■□□□□ 0.97
HDAC1-201ENST00000373548 FUT8Q9BYC5 575 aa21.12■□□□□ 0.97
HDAC1-201ENST00000373548 THAP2Q9H0W7 228 aa21.12■□□□□ 0.97
HDAC1-201ENST00000373548 EVPLQ92817 2033 aa21.12■□□□□ 0.97
HDAC1-201ENST00000373548 ERLIN1O75477 346 aa21.11■□□□□ 0.97
HDAC1-201ENST00000373548 GCNT1Q02742 428 aa21.11■□□□□ 0.97
HDAC1-201ENST00000373548 TDRD10Q5VZ19 366 aaKnown RBP21.11■□□□□ 0.97
HDAC1-201ENST00000373548 MAMDC4Q6UXC1 1216 aa21.11■□□□□ 0.97
HDAC1-201ENST00000373548 ABRAQ8N0Z2 381 aa21.11■□□□□ 0.97
HDAC1-201ENST00000373548 RNF149Q8NC42 400 aa21.11■□□□□ 0.97
HDAC1-201ENST00000373548 DHX38Q92620 1227 aaKnown RBP21.11■□□□□ 0.97
HDAC1-201ENST00000373548 ISCUQ9H1K1 167 aa21.11■□□□□ 0.97
HDAC1-201ENST00000373548 VTA1Q9NP79 307 aa21.11■□□□□ 0.97
HDAC1-201ENST00000373548 HBP1O60381 514 aa21.11■□□□□ 0.97
HDAC1-201ENST00000373548 HLA-DRAP01903 254 aa21.11■□□□□ 0.97
HDAC1-201ENST00000373548 TAF3Q5VWG9 929 aa21.11■□□□□ 0.97
HDAC1-201ENST00000373548 KRT222Q8N1A0 295 aa21.11■□□□□ 0.97
HDAC1-201ENST00000373548 MRPL4Q9BYD3 311 aaKnown RBP21.11■□□□□ 0.97
HDAC1-201ENST00000373548 SUCLA2Q9P2R7 463 aaPredicted RBP21.11■□□□□ 0.97
HDAC1-201ENST00000373548 STXBP5LQ9Y2K9 1186 aa21.11■□□□□ 0.97
HDAC1-201ENST00000373548 CNTNAP2Q9UHC6 1331 aa21.1■□□□□ 0.97
HDAC1-201ENST00000373548 STRNO43815 780 aa21.1■□□□□ 0.97
HDAC1-201ENST00000373548 HARSP12081 509 aaKnown RBP21.1■□□□□ 0.97
HDAC1-201ENST00000373548 LAMC2Q13753 1193 aa21.1■□□□□ 0.97
HDAC1-201ENST00000373548 PTPROQ16827 1216 aa21.1■□□□□ 0.97
HDAC1-201ENST00000373548 SEZ6Q53EL9 994 aa21.1■□□□□ 0.97
HDAC1-201ENST00000373548 SPRYD7Q5W111 196 aa21.1■□□□□ 0.97
HDAC1-201ENST00000373548 SYCE1Q8N0S2 351 aa21.1■□□□□ 0.97
HDAC1-201ENST00000373548 TAF4BQ92750 862 aa21.1■□□□□ 0.97
HDAC1-201ENST00000373548 JPH2Q9BR39 696 aaPredicted RBP21.1■□□□□ 0.97
HDAC1-201ENST00000373548 RNPEPQ9H4A4 650 aa21.1■□□□□ 0.97
HDAC1-201ENST00000373548 C1orf112Q9NSG2 853 aa21.1■□□□□ 0.97
HDAC1-201ENST00000373548 IVNS1ABPQ9Y6Y0 642 aa21.1■□□□□ 0.97
HDAC1-201ENST00000373548 RBM47A0AV96 593 aaKnown RBP21.1■□□□□ 0.97
HDAC1-201ENST00000373548 CLDN3O15551 220 aa21.1■□□□□ 0.97
HDAC1-201ENST00000373548 VNN1O95497 513 aa21.1■□□□□ 0.97
HDAC1-201ENST00000373548 FTLP02792 175 aaPredicted RBP21.1■□□□□ 0.97
HDAC1-201ENST00000373548 ZBTB48P10074 688 aaPredicted RBP21.1■□□□□ 0.97
HDAC1-201ENST00000373548 CYP11B1P15538 503 aa21.1■□□□□ 0.97
HDAC1-201ENST00000373548 FMO1Q01740 532 aa21.1■□□□□ 0.97
HDAC1-201ENST00000373548 ENOSF1Q7L5Y1 443 aa21.1■□□□□ 0.97
HDAC1-201ENST00000373548 PEX26Q7Z412 305 aa21.1■□□□□ 0.97
HDAC1-201ENST00000373548 DAAM2Q86T65 1068 aa21.1■□□□□ 0.97
HDAC1-201ENST00000373548 ZBTB8OSQ8IWT0 167 aa21.1■□□□□ 0.97
HDAC1-201ENST00000373548 ZBTB10Q96DT7 871 aa21.1■□□□□ 0.97
HDAC1-201ENST00000373548 CGRRF1Q99675 332 aa21.1■□□□□ 0.97
HDAC1-201ENST00000373548 KATNBL1Q9H079 304 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms