RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 EPHA7Q15375 998 aa15.05■□□□□ -0
LMX1B-202ENST00000373474 ZBTB41Q5SVQ8 909 aa15.05■□□□□ -0
LMX1B-202ENST00000373474 EP400NLQ6ZTU2 488 aa15.05■□□□□ -0
LMX1B-202ENST00000373474 NAF1Q96HR8 494 aaKnown RBP15.05■□□□□ -0
LMX1B-202ENST00000373474 PARVAQ9NVD7 372 aa15.05■□□□□ -0
LMX1B-202ENST00000373474 H0Y626 953 aa15.05■□□□□ -0
LMX1B-202ENST00000373474 PPP1R37O75864 691 aa15.05■□□□□ -0
LMX1B-202ENST00000373474 TRIM16O95361 564 aa15.05■□□□□ -0
LMX1B-202ENST00000373474 GYPCP04921 128 aa15.05■□□□□ -0
LMX1B-202ENST00000373474 ARFIP2P53365 341 aa15.05■□□□□ -0
LMX1B-202ENST00000373474 ROR1Q01973 937 aa15.05■□□□□ -0
LMX1B-202ENST00000373474 ZC3H12BQ5HYM0 836 aaKnown RBP15.05■□□□□ -0
LMX1B-202ENST00000373474 PRMT1Q99873 361 aaKnown RBP15.05■□□□□ -0
LMX1B-202ENST00000373474 SETD1BQ9UPS6 1966 aaKnown RBP15.05■□□□□ -0
LMX1B-202ENST00000373474 F5H6K3 240 aa15.05■□□□□ -0
LMX1B-202ENST00000373474 AKR1B1P15121 316 aa15.05■□□□□ -0
LMX1B-202ENST00000373474 ELF1P32519 619 aa15.05■□□□□ -0
LMX1B-202ENST00000373474 KLRC3Q07444 240 aa15.05■□□□□ -0
LMX1B-202ENST00000373474 ATP11CQ8NB49 1132 aa15.05■□□□□ -0
LMX1B-202ENST00000373474 HIPK4Q8NE63 616 aa15.05■□□□□ -0
LMX1B-202ENST00000373474 SLC35G2Q8TBE7 412 aa15.05■□□□□ -0
LMX1B-202ENST00000373474 STK33Q9BYT3 514 aa15.05■□□□□ -0
LMX1B-202ENST00000373474 SLC12A1Q13621 1099 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 KRT27Q7Z3Y8 459 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 THAP11Q96EK4 314 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 TDRD3Q9H7E2 651 aaKnown RBP15.04■□□□□ -0
LMX1B-202ENST00000373474 PSD3Q9NYI0 1048 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.04■□□□□ -0
LMX1B-202ENST00000373474 ATP11BQ9Y2G3 1177 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 RNF103-CHMP3A0A140T963 221 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 FAM196BA6NMK8 535 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 KITP10721 976 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 STAT4Q14765 748 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 KIAA1755Q5JYT7 1200 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 C10orf88Q9H8K7 445 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 MEFVO15553 781 aaPredicted RBP15.04■□□□□ -0
LMX1B-202ENST00000373474 KIF19Q2TAC6 998 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 NSUN6Q8TEA1 469 aaKnown RBP15.04■□□□□ -0
LMX1B-202ENST00000373474 EPB41L4AQ9HCS5 686 aaPredicted RBP15.04■□□□□ -0
LMX1B-202ENST00000373474 SERPINB4P48594 390 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 COPS2P61201 443 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 BYSLQ13895 437 aaKnown RBP15.04■□□□□ -0
LMX1B-202ENST00000373474 ZNF568Q3ZCX4 644 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 CCDC195A0A1B0GUA6 201 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 M0QYV0 167 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 AP3M2P53677 418 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 CYLC2Q14093 348 aaPredicted RBP15.04■□□□□ -0
LMX1B-202ENST00000373474 GJC2Q5T442 439 aaPredicted RBP15.04■□□□□ -0
LMX1B-202ENST00000373474 AGBL2Q5U5Z8 902 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 KCNB2Q92953 911 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 TIPINQ9BVW5 301 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 GABBR1Q9UBS5 961 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 APEX2Q9UBZ4 518 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 HPS5Q9UPZ3 1129 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 HEY1Q9Y5J3 304 aa15.04■□□□□ -0
LMX1B-202ENST00000373474 ITSN1Q15811 1721 aa15.03■□□□□ -0
LMX1B-202ENST00000373474 RFX5P48382 616 aaPredicted RBP15.03■□□□□ -0
LMX1B-202ENST00000373474 KIF22Q14807 665 aa15.03■□□□□ -0
LMX1B-202ENST00000373474 RASSF3Q86WH2 238 aa15.03■□□□□ -0
LMX1B-202ENST00000373474 MYLK4Q86YV6 388 aaPredicted RBP15.03■□□□□ -0
LMX1B-202ENST00000373474 C2orf40Q9H1Z8 148 aa15.03■□□□□ -0
LMX1B-202ENST00000373474 TMEM247A6NEH6 219 aa15.03■□□□□ -0
LMX1B-202ENST00000373474 PPP1R3GB7ZBB8 358 aa15.03■□□□□ -0
LMX1B-202ENST00000373474 EFCAB14O75071 495 aa15.03■□□□□ -0
LMX1B-202ENST00000373474 PHKA2P46019 1235 aa15.03■□□□□ -0
LMX1B-202ENST00000373474 KLHL8Q9P2G9 620 aaPredicted RBP15.03■□□□□ -0
LMX1B-202ENST00000373474 SUGT1Q9Y2Z0 365 aa15.03■□□□□ -0
LMX1B-202ENST00000373474 TAF6LQ9Y6J9 622 aa15.03■□□□□ -0
LMX1B-202ENST00000373474 RNF139Q8WU17 664 aa15.03■□□□□ -0
LMX1B-202ENST00000373474 NCLNQ969V3 563 aa15.03■□□□□ -0
LMX1B-202ENST00000373474 FAM161BQ96MY7 647 aa15.03■□□□□ -0
LMX1B-202ENST00000373474 ETNK1Q9HBU6 452 aa15.03■□□□□ -0
LMX1B-202ENST00000373474 CNTNAP5Q8WYK1 1306 aa15.03■□□□□ -0
LMX1B-202ENST00000373474 F8W8V4 182 aa15.03■□□□□ -0
LMX1B-202ENST00000373474 CCDC22O60826 627 aa15.03■□□□□ -0
LMX1B-202ENST00000373474 WBP4O75554 376 aaKnown RBP15.03■□□□□ -0
LMX1B-202ENST00000373474 NMT1P30419 496 aaKnown RBP15.03■□□□□ -0
LMX1B-202ENST00000373474 SWSAP1Q6NVH7 229 aa15.03■□□□□ -0
LMX1B-202ENST00000373474 PRPF38AQ8NAV1 312 aaKnown RBP15.03■□□□□ -0
LMX1B-202ENST00000373474 SMYD3Q9H7B4 428 aa15.03■□□□□ -0
LMX1B-202ENST00000373474 DCTN4Q9UJW0 460 aa15.03■□□□□ -0
LMX1B-202ENST00000373474 MYMKA6NI61 221 aa15.02■□□□□ -0
LMX1B-202ENST00000373474 ADRA2BP18089 450 aa15.02■□□□□ -0
LMX1B-202ENST00000373474 NAB2Q15742 525 aa15.02■□□□□ -0
LMX1B-202ENST00000373474 SPATA21Q7Z572 469 aa15.02■□□□□ -0
LMX1B-202ENST00000373474 DDX42Q86XP3 938 aaKnown RBP eCLIP15.02■□□□□ -0
LMX1B-202ENST00000373474 CDKL3Q8IVW4 592 aaPredicted RBP15.02■□□□□ -0
LMX1B-202ENST00000373474 ZNF280CQ8ND82 737 aa15.02■□□□□ -0
LMX1B-202ENST00000373474 ATL2Q8NHH9 583 aa15.02■□□□□ -0
LMX1B-202ENST00000373474 CYP26A1O43174 497 aa15.02■□□□□ -0
LMX1B-202ENST00000373474 SLC4A1P02730 911 aa15.02■□□□□ -0
LMX1B-202ENST00000373474 KLC1Q07866 573 aa15.02■□□□□ -0
LMX1B-202ENST00000373474 PPM1NQ8N819 430 aa15.02■□□□□ -0
LMX1B-202ENST00000373474 CCDC90BQ9GZT6 254 aa15.02■□□□□ -0
LMX1B-202ENST00000373474 RBM12Q9NTZ6 932 aaKnown RBP15.02■□□□□ -0
LMX1B-202ENST00000373474 STMN3Q9NZ72 180 aa15.02■□□□□ -0
LMX1B-202ENST00000373474 IREB2P48200 963 aaKnown RBP15.02□□□□□ -0.01
LMX1B-202ENST00000373474 AARSP49588 968 aaKnown RBP eCLIP15.02□□□□□ -0.01
LMX1B-202ENST00000373474 YWHAHQ04917 246 aaPredicted RBP15.02□□□□□ -0.01
LMX1B-202ENST00000373474 SNRNP48Q6IEG0 339 aaKnown RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms