RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 ZFATQ9P243 1243 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 NCAPD2Q15021 1401 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 SPDYE5A6NIY4 337 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 KRT16P08779 473 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 HIST1H2AGP0C0S8 130 aaPredicted RBP12.18□□□□□ -0.46
VCL-202ENST00000372755 HSPA1AP0DMV8 641 aaKnown RBP12.18□□□□□ -0.46
VCL-202ENST00000372755 HSPA1BP0DMV9 641 aaKnown RBP12.18□□□□□ -0.46
VCL-202ENST00000372755 CDH2P19022 906 aaPredicted RBP12.18□□□□□ -0.46
VCL-202ENST00000372755 HIST1H2ADP20671 130 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 CDC42EP1Q00587 391 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 EPHA7Q15375 998 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 SPDYE7PQ495Y7 208 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 TSPAN17Q96FV3 270 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 CEP95Q96GE4 821 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 HIST1H2AHQ96KK5 128 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 HIST1H2AJQ99878 128 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 H2AFJQ9BTM1 129 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.18□□□□□ -0.46
VCL-202ENST00000372755 H0Y626 953 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 ZNF263O14978 683 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 SLC16A3O15427 465 aaKnown RBP12.18□□□□□ -0.46
VCL-202ENST00000372755 TRIM16O95361 564 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 PDHA1P08559 390 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 MAP4P27816 1152 aaKnown RBP12.18□□□□□ -0.46
VCL-202ENST00000372755 HMOX2P30519 316 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 ARSEP51690 589 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 TPI1P60174 286 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 HIC1Q14526 733 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 SYTL3Q4VX76 610 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 ENAHQ8N8S7 591 aaPredicted RBP12.18□□□□□ -0.46
VCL-202ENST00000372755 ZNF555Q8NEP9 628 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 AGPAT1Q99943 283 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 EIF2AK1Q9BQI3 630 aaKnown RBP12.18□□□□□ -0.46
VCL-202ENST00000372755 OSBPL5Q9H0X9 879 aaPredicted RBP12.18□□□□□ -0.46
VCL-202ENST00000372755 CD209Q9NNX6 404 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 MLXIPLQ9NP71 852 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 OLFML3Q9NRN5 406 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 CFAP74Q9C0B2 1584 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 C5orf58C9J3I9 102 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 RTN2O75298 545 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 KRT17Q04695 432 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 E2F4Q16254 413 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 HIF1AQ16665 826 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 ZNF746Q6NUN9 644 aaPredicted RBP12.18□□□□□ -0.46
VCL-202ENST00000372755 GOLPH3LQ9H4A5 285 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 TRAPPC3O43617 180 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 LCP1P13796 627 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 KCNQ4P56696 695 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 EIF3EP60228 445 aaKnown RBP12.17□□□□□ -0.46
VCL-202ENST00000372755 RCOR2Q8IZ40 523 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 LY9Q9HBG7 655 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 TUFT1Q9NNX1 390 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 EMSYQ7Z589 1322 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 TARSL2A2RTX5 802 aaKnown RBP12.17□□□□□ -0.46
VCL-202ENST00000372755 SULT1E1P49888 294 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 TERF2Q15554 542 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 ADGRF4Q8IZF3 695 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 MINPP1Q9UNW1 487 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 ARAP3Q8WWN8 1544 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 GFAPP14136 432 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 ALX1Q15699 326 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 CCDC85BQ15834 202 aaPredicted RBP12.17□□□□□ -0.46
VCL-202ENST00000372755 MEI1Q5TIA1 1274 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 PKN3Q6P5Z2 889 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 SPATA2LQ8IUW3 424 aaPredicted RBP12.17□□□□□ -0.46
VCL-202ENST00000372755 PARP9Q8IXQ6 854 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 FMR1NBQ8N0W7 255 aaPredicted RBP12.17□□□□□ -0.46
VCL-202ENST00000372755 ATL2Q8NHH9 583 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 KCNV2Q8TDN2 545 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 OXER1Q8TDS5 423 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 PHF21AQ96BD5 680 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 ZFYVE19Q96K21 471 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 FOPNLQ96NB1 174 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 DCP1AQ9NPI6 582 aaPredicted RBP12.17□□□□□ -0.46
VCL-202ENST00000372755 PKD2L2Q9NZM6 624 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 TSR3Q9UJK0 312 aaKnown RBP12.17□□□□□ -0.46
VCL-202ENST00000372755 PCDHA10Q9Y5I2 948 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 CDHR2Q9BYE9 1310 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 C3orf70A6NLC5 250 aaPredicted RBP12.17□□□□□ -0.46
VCL-202ENST00000372755 QRICH1Q2TAL8 776 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 ANO4Q32M45 955 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 C1orf54Q8WWF1 131 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 STAMBPL1Q96FJ0 436 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 KIF21AQ7Z4S6 1674 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 MYO1CO00159 1063 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 ATP9BO43861 1147 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 ARIH2O95376 493 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 GSPT2Q8IYD1 628 aaKnown RBP12.17□□□□□ -0.46
VCL-202ENST00000372755 COG1Q8WTW3 980 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 NARFQ9UHQ1 456 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 SMG5Q9UPR3 1016 aaKnown RBP12.17□□□□□ -0.46
VCL-202ENST00000372755 TRAF3IP3Q9Y228 551 aa12.17□□□□□ -0.46
VCL-202ENST00000372755 HNRNPRO43390 633 aaKnown RBP12.16□□□□□ -0.46
VCL-202ENST00000372755 EYA4O95677 639 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 PRDX5P30044 214 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 RAD23BP54727 409 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 GYS2P54840 703 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 SEPT12Q8IYM1 358 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 B4GALNT2Q8NHY0 566 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 PPP1R2P1Q96PQ5 205 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms