RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 OGFOD1Q8N543 542 aa20.54■□□□□ 0.88
TMEM53-202ENST00000372237 UHMK1Q8TAS1 419 aaKnown RBP20.54■□□□□ 0.88
TMEM53-202ENST00000372237 CEP89Q96ST8 783 aa20.54■□□□□ 0.88
TMEM53-202ENST00000372237 ASTN2O75129 1339 aaPredicted RBP20.53■□□□□ 0.88
TMEM53-202ENST00000372237 PASKQ96RG2 1323 aa20.53■□□□□ 0.88
TMEM53-202ENST00000372237 DRD4P21917 467 aa20.53■□□□□ 0.88
TMEM53-202ENST00000372237 RWDD2BP57060 319 aa20.53■□□□□ 0.88
TMEM53-202ENST00000372237 MRPS9P82933 396 aaKnown RBP20.53■□□□□ 0.88
TMEM53-202ENST00000372237 FAM102BQ5T8I3 360 aa20.53■□□□□ 0.88
TMEM53-202ENST00000372237 PCNX4Q63HM2 1172 aa20.53■□□□□ 0.88
TMEM53-202ENST00000372237 MCF2L2Q86YR7 1114 aa20.53■□□□□ 0.88
TMEM53-202ENST00000372237 CPXCR1Q8N123 301 aa20.53■□□□□ 0.88
TMEM53-202ENST00000372237 SAAL1Q96ER3 474 aa20.53■□□□□ 0.88
TMEM53-202ENST00000372237 CCDC114Q96M63 670 aa20.53■□□□□ 0.88
TMEM53-202ENST00000372237 TIPINQ9BVW5 301 aa20.53■□□□□ 0.88
TMEM53-202ENST00000372237 TBC1D22BQ9NU19 505 aa20.53■□□□□ 0.88
TMEM53-202ENST00000372237 UVRAGQ9P2Y5 699 aa20.53■□□□□ 0.88
TMEM53-202ENST00000372237 EXOC7Q9UPT5 735 aa20.53■□□□□ 0.88
TMEM53-202ENST00000372237 RARAP10276 462 aa20.53■□□□□ 0.88
TMEM53-202ENST00000372237 KCNJ1P48048 391 aa20.53■□□□□ 0.88
TMEM53-202ENST00000372237 SMTNP53814 917 aa20.53■□□□□ 0.88
TMEM53-202ENST00000372237 UGCGQ16739 394 aa20.53■□□□□ 0.88
TMEM53-202ENST00000372237 CLEC4DQ8WXI8 215 aa20.53■□□□□ 0.88
TMEM53-202ENST00000372237 ZBTB12Q9Y330 459 aaPredicted RBP20.53■□□□□ 0.88
TMEM53-202ENST00000372237 RIPK2O43353 540 aa20.52■□□□□ 0.88
TMEM53-202ENST00000372237 AGTP01019 485 aa20.52■□□□□ 0.88
TMEM53-202ENST00000372237 RARGP13631 454 aa20.52■□□□□ 0.88
TMEM53-202ENST00000372237 ADSSP30520 456 aa20.52■□□□□ 0.88
TMEM53-202ENST00000372237 IFI35P80217 286 aaPredicted RBP20.52■□□□□ 0.88
TMEM53-202ENST00000372237 CDR2Q01850 454 aa20.52■□□□□ 0.88
TMEM53-202ENST00000372237 SPDYE2Q495Y8 402 aa20.52■□□□□ 0.88
TMEM53-202ENST00000372237 XKR9Q5GH70 373 aa20.52■□□□□ 0.88
TMEM53-202ENST00000372237 UBAP2Q5T6F2 1119 aaKnown RBP20.52■□□□□ 0.88
TMEM53-202ENST00000372237 NSMFQ6X4W1 530 aa20.52■□□□□ 0.88
TMEM53-202ENST00000372237 CYFIP1Q7L576 1253 aa20.52■□□□□ 0.88
TMEM53-202ENST00000372237 C4orf19Q8IY42 314 aa20.52■□□□□ 0.88
TMEM53-202ENST00000372237 SLC17A8Q8NDX2 589 aa20.52■□□□□ 0.88
TMEM53-202ENST00000372237 FBXO41Q8TF61 875 aa20.52■□□□□ 0.88
TMEM53-202ENST00000372237 POP1Q99575 1024 aaKnown RBP20.52■□□□□ 0.88
TMEM53-202ENST00000372237 HOMER2Q9NSB8 354 aa20.52■□□□□ 0.88
TMEM53-202ENST00000372237 TCEAL9Q9UHQ7 104 aa20.52■□□□□ 0.88
TMEM53-202ENST00000372237 COL4A5P29400 1685 aa20.52■□□□□ 0.87
TMEM53-202ENST00000372237 ANKRD63C9JTQ0 380 aa20.52■□□□□ 0.87
TMEM53-202ENST00000372237 TBC1D12O60347 775 aa20.52■□□□□ 0.87
TMEM53-202ENST00000372237 CNGA1P29973 690 aa20.52■□□□□ 0.87
TMEM53-202ENST00000372237 SIX1Q15475 284 aaPredicted RBP20.52■□□□□ 0.87
TMEM53-202ENST00000372237 ANKRD20A8PQ5CZ79 823 aa20.52■□□□□ 0.87
TMEM53-202ENST00000372237 RNF207Q6ZRF8 634 aa20.52■□□□□ 0.87
TMEM53-202ENST00000372237 HELQQ8TDG4 1101 aa20.52■□□□□ 0.87
TMEM53-202ENST00000372237 EPS8L3Q8TE67 593 aaKnown RBP20.52■□□□□ 0.87
TMEM53-202ENST00000372237 PARD3BQ8TEW8 1205 aa20.52■□□□□ 0.87
TMEM53-202ENST00000372237 ART4Q93070 314 aa20.52■□□□□ 0.87
TMEM53-202ENST00000372237 NT5C1BQ96P26 610 aa20.52■□□□□ 0.87
TMEM53-202ENST00000372237 TMEM8AQ9HCN3 771 aa20.52■□□□□ 0.87
TMEM53-202ENST00000372237 TBX20Q9UMR3 447 aa20.52■□□□□ 0.87
TMEM53-202ENST00000372237 ECEL1O95672 775 aa20.51■□□□□ 0.87
TMEM53-202ENST00000372237 ASNSP08243 561 aa20.51■□□□□ 0.87
TMEM53-202ENST00000372237 SLCO1A2P46721 670 aa20.51■□□□□ 0.87
TMEM53-202ENST00000372237 CALCOCO2Q13137 446 aa20.51■□□□□ 0.87
TMEM53-202ENST00000372237 PPP1R7Q15435 360 aa20.51■□□□□ 0.87
TMEM53-202ENST00000372237 SPRED3Q2MJR0 410 aa20.51■□□□□ 0.87
TMEM53-202ENST00000372237 PLA2G4FQ68DD2 849 aa20.51■□□□□ 0.87
TMEM53-202ENST00000372237 KIFAP3Q92845 792 aa20.51■□□□□ 0.87
TMEM53-202ENST00000372237 PLVAPQ9BX97 442 aa20.51■□□□□ 0.87
TMEM53-202ENST00000372237 ADAM7Q9H2U9 754 aa20.51■□□□□ 0.87
TMEM53-202ENST00000372237 DNM1LO00429 736 aa20.5■□□□□ 0.87
TMEM53-202ENST00000372237 EIF2AK2P19525 551 aaKnown RBP20.5■□□□□ 0.87
TMEM53-202ENST00000372237 GPC3P51654 580 aa20.5■□□□□ 0.87
TMEM53-202ENST00000372237 PSMC5P62195 406 aa20.5■□□□□ 0.87
TMEM53-202ENST00000372237 SWT1Q5T5J6 900 aaKnown RBP20.5■□□□□ 0.87
TMEM53-202ENST00000372237 CCDC25Q86WR0 208 aa20.5■□□□□ 0.87
TMEM53-202ENST00000372237 FBXL13Q8NEE6 735 aa20.5■□□□□ 0.87
TMEM53-202ENST00000372237 ATXN2LQ8WWM7 1075 aaKnown RBP20.5■□□□□ 0.87
TMEM53-202ENST00000372237 ZNF317Q96PQ6 595 aaPredicted RBP20.5■□□□□ 0.87
TMEM53-202ENST00000372237 KIFC3Q9BVG8 833 aa20.5■□□□□ 0.87
TMEM53-202ENST00000372237 ZNF341Q9BYN7 854 aa20.5■□□□□ 0.87
TMEM53-202ENST00000372237 STMN4Q9H169 189 aaPredicted RBP20.5■□□□□ 0.87
TMEM53-202ENST00000372237 INTS9Q9NV88 658 aaKnown RBP20.5■□□□□ 0.87
TMEM53-202ENST00000372237 COQ4Q9Y3A0 265 aa20.5■□□□□ 0.87
TMEM53-202ENST00000372237 RASGRF2O14827 1237 aa20.5■□□□□ 0.87
TMEM53-202ENST00000372237 ZBTB7AO95365 584 aa20.5■□□□□ 0.87
TMEM53-202ENST00000372237 DLATP10515 647 aaKnown RBP20.5■□□□□ 0.87
TMEM53-202ENST00000372237 LLGL1Q15334 1064 aa20.5■□□□□ 0.87
TMEM53-202ENST00000372237 C12orf50Q8NA57 414 aaPredicted RBP20.5■□□□□ 0.87
TMEM53-202ENST00000372237 TMEM161BQ8NDZ6 487 aa20.5■□□□□ 0.87
TMEM53-202ENST00000372237 SYTL5Q8TDW5 730 aaPredicted RBP20.5■□□□□ 0.87
TMEM53-202ENST00000372237 TMEM109Q9BVC6 243 aa20.5■□□□□ 0.87
TMEM53-202ENST00000372237 VPS33BQ9H267 617 aa20.5■□□□□ 0.87
TMEM53-202ENST00000372237 KLC4Q9NSK0 619 aa20.5■□□□□ 0.87
TMEM53-202ENST00000372237 ZNFX1Q9P2E3 1918 aaKnown RBP20.5■□□□□ 0.87
TMEM53-202ENST00000372237 CLDN3O15551 220 aa20.49■□□□□ 0.87
TMEM53-202ENST00000372237 DMP1Q13316 513 aaPredicted RBP20.49■□□□□ 0.87
TMEM53-202ENST00000372237 ACAD10Q6JQN1 1059 aa20.49■□□□□ 0.87
TMEM53-202ENST00000372237 MAP4K3Q8IVH8 894 aa20.49■□□□□ 0.87
TMEM53-202ENST00000372237 TAS1R2Q8TE23 839 aa20.49■□□□□ 0.87
TMEM53-202ENST00000372237 P3H4Q92791 437 aa20.49■□□□□ 0.87
TMEM53-202ENST00000372237 LRRC19Q9H756 370 aa20.49■□□□□ 0.87
TMEM53-202ENST00000372237 SLC40A1Q9NP59 571 aa20.49■□□□□ 0.87
TMEM53-202ENST00000372237 TOPORSQ9NS56 1045 aaPredicted RBP20.49■□□□□ 0.87
TMEM53-202ENST00000372237 RAB20Q9NX57 234 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms