RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 CNTN2Q02246 1040 aa22.14■■□□□ 1.13
VEGFA-204ENST00000372064 UAP1Q16222 522 aaPredicted RBP22.14■■□□□ 1.13
VEGFA-204ENST00000372064 SUPT20HL1Q3ZLR7 823 aa22.14■■□□□ 1.13
VEGFA-204ENST00000372064 NOL9Q5SY16 702 aaKnown RBP22.14■■□□□ 1.13
VEGFA-204ENST00000372064 MIS18BP1Q6P0N0 1132 aa22.14■■□□□ 1.13
VEGFA-204ENST00000372064 DLK2Q6UY11 383 aa22.14■■□□□ 1.13
VEGFA-204ENST00000372064 UBL4BQ8N7F7 174 aa22.14■■□□□ 1.13
VEGFA-204ENST00000372064 SGIP1Q9BQI5 828 aa22.14■■□□□ 1.13
VEGFA-204ENST00000372064 GRIN2DO15399 1336 aa22.14■■□□□ 1.13
VEGFA-204ENST00000372064 H0YGN5 161 aa22.13■■□□□ 1.13
VEGFA-204ENST00000372064 CYFIP1Q7L576 1253 aa22.13■■□□□ 1.13
VEGFA-204ENST00000372064 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.13■■□□□ 1.131e-6■□□□□ 11.1
VEGFA-204ENST00000372064 DDX1Q92499 740 aaKnown RBP22.13■■□□□ 1.13
VEGFA-204ENST00000372064 CD101Q93033 1021 aa22.13■■□□□ 1.13
VEGFA-204ENST00000372064 IFT74Q96LB3 600 aa22.13■■□□□ 1.13
VEGFA-204ENST00000372064 FAM213AQ9BRX8 229 aa22.13■■□□□ 1.13
VEGFA-204ENST00000372064 ERVK-5Q9HDB9 667 aa22.13■■□□□ 1.13
VEGFA-204ENST00000372064 NFS1Q9Y697 457 aa22.13■■□□□ 1.13
VEGFA-204ENST00000372064 MYPNQ86TC9 1320 aa22.13■■□□□ 1.13
VEGFA-204ENST00000372064 GOLGA6L10A0A0M3HER8 536 aa22.13■■□□□ 1.13
VEGFA-204ENST00000372064 A6NNZ2 444 aa22.13■■□□□ 1.13
VEGFA-204ENST00000372064 H0YCG3 227 aa22.13■■□□□ 1.13
VEGFA-204ENST00000372064 ZNF211Q13398 564 aaPredicted RBP22.13■■□□□ 1.13
VEGFA-204ENST00000372064 R3HDM1Q15032 1099 aaKnown RBP22.13■■□□□ 1.13
VEGFA-204ENST00000372064 TUBB8Q3ZCM7 444 aa22.13■■□□□ 1.13
VEGFA-204ENST00000372064 XKR3Q5GH77 459 aa22.13■■□□□ 1.13
VEGFA-204ENST00000372064 NLGN2Q8NFZ4 835 aa22.13■■□□□ 1.13
VEGFA-204ENST00000372064 ATP4AP20648 1035 aa22.13■■□□□ 1.13
VEGFA-204ENST00000372064 PEX5P50542 639 aa22.13■■□□□ 1.13
VEGFA-204ENST00000372064 PDE6CP51160 858 aa22.13■■□□□ 1.13
VEGFA-204ENST00000372064 C15orf39Q6ZRI6 1047 aa22.13■■□□□ 1.13
VEGFA-204ENST00000372064 DHX38Q92620 1227 aaKnown RBP22.13■■□□□ 1.13
VEGFA-204ENST00000372064 KRT35Q92764 455 aa22.13■■□□□ 1.13
VEGFA-204ENST00000372064 TATDN2Q93075 761 aa22.13■■□□□ 1.13
VEGFA-204ENST00000372064 TULP2O00295 520 aa22.12■■□□□ 1.13
VEGFA-204ENST00000372064 ATMINO43313 823 aaPredicted RBP22.12■■□□□ 1.13
VEGFA-204ENST00000372064 ZC3H11AO75152 810 aaKnown RBP eCLIP22.12■■□□□ 1.134e-14■■■■■ 46.5
VEGFA-204ENST00000372064 CLDN10P78369 228 aa22.12■■□□□ 1.13
VEGFA-204ENST00000372064 GCNT1Q02742 428 aa22.12■■□□□ 1.13
VEGFA-204ENST00000372064 KDM7AQ6ZMT4 941 aa22.12■■□□□ 1.13
VEGFA-204ENST00000372064 SH2D3CQ8N5H7 860 aa22.12■■□□□ 1.13
VEGFA-204ENST00000372064 ATP8B4Q8TF62 1192 aa22.12■■□□□ 1.13
VEGFA-204ENST00000372064 RAB17Q9H0T7 212 aa22.12■■□□□ 1.13
VEGFA-204ENST00000372064 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.12■■□□□ 1.132e-7■■■■□ 20.9
VEGFA-204ENST00000372064 GTF3C4Q9UKN8 822 aa22.12■■□□□ 1.13
VEGFA-204ENST00000372064 TMEM110-MUSTN1A8MSY1 372 aa22.12■■□□□ 1.13
VEGFA-204ENST00000372064 COMTP21964 271 aa22.12■■□□□ 1.13
VEGFA-204ENST00000372064 STXBP2Q15833 593 aa22.12■■□□□ 1.13
VEGFA-204ENST00000372064 ENOSF1Q7L5Y1 443 aa22.12■■□□□ 1.13
VEGFA-204ENST00000372064 ATP6V1G3Q96LB4 118 aa22.12■■□□□ 1.13
VEGFA-204ENST00000372064 PI4K2AQ9BTU6 479 aa22.12■■□□□ 1.13
VEGFA-204ENST00000372064 WNT8AQ9H1J5 351 aa22.12■■□□□ 1.13
VEGFA-204ENST00000372064 ZNFX1Q9P2E3 1918 aaKnown RBP22.12■■□□□ 1.13
VEGFA-204ENST00000372064 EIF3HO15372 352 aaKnown RBP eCLIP22.11■■□□□ 1.133e-7■■■□□ 15.9
VEGFA-204ENST00000372064 GRIN3BO60391 1043 aa22.11■■□□□ 1.13
VEGFA-204ENST00000372064 USP2O75604 605 aaPredicted RBP22.11■■□□□ 1.13
VEGFA-204ENST00000372064 HSPA6P17066 643 aa22.11■■□□□ 1.13
VEGFA-204ENST00000372064 FLT3P36888 993 aa22.11■■□□□ 1.13
VEGFA-204ENST00000372064 DR1Q01658 176 aa22.11■■□□□ 1.13
VEGFA-204ENST00000372064 DHX34Q14147 1143 aaKnown RBP22.11■■□□□ 1.13
VEGFA-204ENST00000372064 EMC2Q15006 297 aa22.11■■□□□ 1.13
VEGFA-204ENST00000372064 TREML2Q5T2D2 321 aa22.11■■□□□ 1.13
VEGFA-204ENST00000372064 KCTD16Q68DU8 428 aa22.11■■□□□ 1.13
VEGFA-204ENST00000372064 ADAT2Q7Z6V5 191 aaKnown RBP22.11■■□□□ 1.13
VEGFA-204ENST00000372064 ANKRD35Q8N283 1001 aa22.11■■□□□ 1.13
VEGFA-204ENST00000372064 TMEM143Q96AN5 459 aa22.11■■□□□ 1.13
VEGFA-204ENST00000372064 TRPC6Q9Y210 931 aa22.11■■□□□ 1.13
VEGFA-204ENST00000372064 PPP2R3BQ9Y5P8 575 aa22.11■■□□□ 1.13
VEGFA-204ENST00000372064 WDR90Q96KV7 1748 aa22.11■■□□□ 1.13
VEGFA-204ENST00000372064 FAM187AA6NFU0 413 aa22.11■■□□□ 1.13
VEGFA-204ENST00000372064 ICAM3P32942 547 aa22.11■■□□□ 1.13
VEGFA-204ENST00000372064 MARCKSL1P49006 195 aa22.11■■□□□ 1.13
VEGFA-204ENST00000372064 POLGP54098 1239 aaPredicted RBP22.11■■□□□ 1.13
VEGFA-204ENST00000372064 MTMR3Q13615 1198 aa22.11■■□□□ 1.13
VEGFA-204ENST00000372064 SH3D19Q5HYK7 790 aa22.11■■□□□ 1.13
VEGFA-204ENST00000372064 DUPD1Q68J44 220 aa22.11■■□□□ 1.13
VEGFA-204ENST00000372064 SEPT14Q6ZU15 432 aa22.11■■□□□ 1.13
VEGFA-204ENST00000372064 TMC3Q7Z5M5 1100 aa22.11■■□□□ 1.13
VEGFA-204ENST00000372064 TMBIM4Q9HC24 238 aa22.11■■□□□ 1.13
VEGFA-204ENST00000372064 KCNG1Q9UIX4 513 aa22.11■■□□□ 1.13
VEGFA-204ENST00000372064 STYXL1Q9Y6J8 313 aa22.11■■□□□ 1.13
VEGFA-204ENST00000372064 HMGB1P1B2RPK0 211 aaPredicted RBP22.1■■□□□ 1.13
VEGFA-204ENST00000372064 ATG7O95352 703 aa22.1■■□□□ 1.13
VEGFA-204ENST00000372064 ZNF564Q8TBZ8 553 aaPredicted RBP22.1■■□□□ 1.13
VEGFA-204ENST00000372064 TRIM51Q9BSJ1 452 aa22.1■■□□□ 1.13
VEGFA-204ENST00000372064 KIAA1586Q9HCI6 787 aa22.1■■□□□ 1.13
VEGFA-204ENST00000372064 UVRAGQ9P2Y5 699 aa22.1■■□□□ 1.13
VEGFA-204ENST00000372064 MAFBQ9Y5Q3 323 aaPredicted RBP22.1■■□□□ 1.13
VEGFA-204ENST00000372064 SNCAIPQ9Y6H5 919 aa22.1■■□□□ 1.13
VEGFA-204ENST00000372064 EXTL3O43909 919 aa22.1■■□□□ 1.13
VEGFA-204ENST00000372064 MESDQ14696 234 aa22.1■■□□□ 1.13
VEGFA-204ENST00000372064 AADACL2Q6P093 401 aa22.1■■□□□ 1.13
VEGFA-204ENST00000372064 CNKSR2Q8WXI2 1034 aa22.1■■□□□ 1.13
VEGFA-204ENST00000372064 FAM81BQ96LP2 452 aa22.1■■□□□ 1.13
VEGFA-204ENST00000372064 NUP85Q9BW27 656 aa22.1■■□□□ 1.13
VEGFA-204ENST00000372064 ZNF302Q9NR11 478 aa22.1■■□□□ 1.13
VEGFA-204ENST00000372064 SIP14410 1827 aa22.1■■□□□ 1.13
VEGFA-204ENST00000372064 GGPS1O95749 300 aa22.1■■□□□ 1.13
VEGFA-204ENST00000372064 CTNNA2P26232 953 aa22.1■■□□□ 1.13
VEGFA-204ENST00000372064 CTNNA1P35221 906 aaKnown RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms