RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 ZNF564Q8TBZ8 553 aaPredicted RBP12.63□□□□□ -0.39
PDE6C-201ENST00000371447 C1orf54Q8WWF1 131 aa12.63□□□□□ -0.39
PDE6C-201ENST00000371447 NLRP4Q96MN2 994 aa12.63□□□□□ -0.39
PDE6C-201ENST00000371447 MSTO1Q9BUK6 570 aa12.63□□□□□ -0.39
PDE6C-201ENST00000371447 CCDC113Q9H0I3 377 aa12.63□□□□□ -0.39
PDE6C-201ENST00000371447 C1orf112Q9NSG2 853 aa12.63□□□□□ -0.39
PDE6C-201ENST00000371447 CNOT8Q9UFF9 292 aaKnown RBP12.63□□□□□ -0.39
PDE6C-201ENST00000371447 UTP11Q9Y3A2 253 aaKnown RBP12.63□□□□□ -0.39
PDE6C-201ENST00000371447 GGPS1O95749 300 aa12.63□□□□□ -0.39
PDE6C-201ENST00000371447 CHRNB2P17787 502 aa12.63□□□□□ -0.39
PDE6C-201ENST00000371447 SLCO1A2P46721 670 aa12.63□□□□□ -0.39
PDE6C-201ENST00000371447 CCT5P48643 541 aa12.63□□□□□ -0.39
PDE6C-201ENST00000371447 CCDC105Q8IYK2 499 aa12.63□□□□□ -0.39
PDE6C-201ENST00000371447 GPD1LQ8N335 351 aa12.63□□□□□ -0.39
PDE6C-201ENST00000371447 TAB3Q8N5C8 712 aaPredicted RBP12.63□□□□□ -0.39
PDE6C-201ENST00000371447 ATG4AQ8WYN0 398 aa12.63□□□□□ -0.39
PDE6C-201ENST00000371447 C11orf70Q9BRQ4 267 aa12.63□□□□□ -0.39
PDE6C-201ENST00000371447 TAF1DQ9H5J8 278 aaPredicted RBP12.63□□□□□ -0.39
PDE6C-201ENST00000371447 ANAPC7Q9UJX3 599 aa12.63□□□□□ -0.39
PDE6C-201ENST00000371447 AGO2Q9UKV8 859 aaKnown RBP12.63□□□□□ -0.39
PDE6C-201ENST00000371447 TRPC6Q9Y210 931 aa12.63□□□□□ -0.39
PDE6C-201ENST00000371447 FZD9O00144 591 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 NOP56O00567 594 aaKnown RBP12.62□□□□□ -0.39
PDE6C-201ENST00000371447 TRIM66O15016 1216 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 DGAT1O75907 488 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 MAPTP10636 758 aaKnown RBP12.62□□□□□ -0.39
PDE6C-201ENST00000371447 PYGMP11217 842 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 ATP4AP20648 1035 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 NCKAP1LP55160 1127 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 CYP24A1Q07973 514 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 WDR44Q5JSH3 913 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 SLC9A9Q8IVB4 645 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 MAP4K3Q8IVH8 894 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 ZNF516Q92618 1163 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 KIFAP3Q92845 792 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 IWS1Q96ST2 819 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 LRRC4CQ9HCJ2 640 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 ANKEF1Q9NU02 776 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 CALCOCO1Q9P1Z2 691 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 SUCLA2Q9P2R7 463 aaPredicted RBP12.62□□□□□ -0.39
PDE6C-201ENST00000371447 RNF14Q9UBS8 474 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 BRCA2P51587 3418 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 UMODL1Q5DID0 1318 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 GOLGA6L10A6NI86 522 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 CLDN3O15551 220 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 OPA1O60313 960 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 TNFSF9P41273 254 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 DR1Q01658 176 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 FMO1Q01740 532 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 LRRC31Q6UY01 552 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 NIPA1Q7RTP0 329 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 TAS1R3Q7RTX0 852 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 CCDC26Q8TAB7 109 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 OLIG1Q8TAK6 271 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 ACSF2Q96CM8 615 aaPredicted RBP12.62□□□□□ -0.39
PDE6C-201ENST00000371447 GPRASP2Q96D09 838 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 VIPAS39Q9H9C1 493 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 GDF3Q9NR23 364 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 RBAKQ9NYW8 714 aaPredicted RBP12.62□□□□□ -0.39
PDE6C-201ENST00000371447 RNF181Q9P0P0 153 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 PCDHB4Q9Y5E5 795 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 PTPRJQ12913 1337 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 USP2O75604 605 aaPredicted RBP12.62□□□□□ -0.39
PDE6C-201ENST00000371447 OR5B17Q8NGF7 314 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 BCAS4Q8TDM0 211 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 CYFIP2Q96F07 1278 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 CAPS2Q9BXY5 557 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 RNF19AQ9NV58 838 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 UBE4BO95155 1302 aa12.62□□□□□ -0.39
PDE6C-201ENST00000371447 GOLGA6L10A0A0M3HER8 536 aa12.61□□□□□ -0.39
PDE6C-201ENST00000371447 HLA-DRAP01903 254 aa12.61□□□□□ -0.39
PDE6C-201ENST00000371447 KRT19P08727 400 aa12.61□□□□□ -0.39
PDE6C-201ENST00000371447 SUPT20HL2P0C7V6 817 aa12.61□□□□□ -0.39
PDE6C-201ENST00000371447 MUTP22033 750 aa12.61□□□□□ -0.39
PDE6C-201ENST00000371447 HSD17B3P37058 310 aa12.61□□□□□ -0.39
PDE6C-201ENST00000371447 KIF22Q14807 665 aa12.61□□□□□ -0.39
PDE6C-201ENST00000371447 SUPT20HL1Q3ZLR7 823 aa12.61□□□□□ -0.39
PDE6C-201ENST00000371447 APOBEC3FQ8IUX4 373 aaKnown RBP12.61□□□□□ -0.39
PDE6C-201ENST00000371447 SCFD2Q8WU76 684 aa12.61□□□□□ -0.39
PDE6C-201ENST00000371447 DCPSQ96C86 337 aaKnown RBP12.61□□□□□ -0.39
PDE6C-201ENST00000371447 HES6Q96HZ4 224 aa12.61□□□□□ -0.39
PDE6C-201ENST00000371447 O00370 1275 aa12.61□□□□□ -0.39
PDE6C-201ENST00000371447 DDX3YO15523 660 aaKnown RBP12.61□□□□□ -0.39
PDE6C-201ENST00000371447 UBA1P22314 1058 aaKnown RBP12.61□□□□□ -0.39
PDE6C-201ENST00000371447 RRM1P23921 792 aa12.61□□□□□ -0.39
PDE6C-201ENST00000371447 TMOD1P28289 359 aa12.61□□□□□ -0.39
PDE6C-201ENST00000371447 TCF7P36402 384 aaPredicted RBP12.61□□□□□ -0.39
PDE6C-201ENST00000371447 TFAMQ00059 246 aaKnown RBP12.61□□□□□ -0.39
PDE6C-201ENST00000371447 XKR3Q5GH77 459 aa12.61□□□□□ -0.39
PDE6C-201ENST00000371447 UBAP2Q5T6F2 1119 aaKnown RBP12.61□□□□□ -0.39
PDE6C-201ENST00000371447 KAZNQ674X7 775 aa12.61□□□□□ -0.39
PDE6C-201ENST00000371447 ABHD15Q6UXT9 468 aa12.61□□□□□ -0.39
PDE6C-201ENST00000371447 PRUNE1Q86TP1 453 aa12.61□□□□□ -0.39
PDE6C-201ENST00000371447 FBXO16Q8IX29 292 aaPredicted RBP12.61□□□□□ -0.39
PDE6C-201ENST00000371447 UBL4BQ8N7F7 174 aa12.61□□□□□ -0.39
PDE6C-201ENST00000371447 MCPH1Q8NEM0 835 aa12.61□□□□□ -0.39
PDE6C-201ENST00000371447 REPS2Q8NFH8 660 aa12.61□□□□□ -0.39
PDE6C-201ENST00000371447 ACTRT1Q8TDG2 376 aa12.61□□□□□ -0.39
PDE6C-201ENST00000371447 HELQQ8TDG4 1101 aa12.61□□□□□ -0.39
PDE6C-201ENST00000371447 TMEM8AQ9HCN3 771 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms