RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 ENPP3O14638 875 aa19.19■□□□□ 0.66
VPS37B-202ENST00000371248 STAG3L1P0CL83 205 aa19.19■□□□□ 0.66
VPS37B-202ENST00000371248 PSMC2P35998 433 aaKnown RBP19.19■□□□□ 0.66
VPS37B-202ENST00000371248 PPIGQ13427 754 aaKnown RBP eCLIP19.19■□□□□ 0.66
VPS37B-202ENST00000371248 SNRNP35Q16560 246 aaKnown RBP19.19■□□□□ 0.66
VPS37B-202ENST00000371248 CRELD2Q6UXH1 353 aaPredicted RBP19.19■□□□□ 0.66
VPS37B-202ENST00000371248 TMEM192Q8IY95 271 aa19.19■□□□□ 0.66
VPS37B-202ENST00000371248 SMG8Q8ND04 991 aaKnown RBP19.19■□□□□ 0.66
VPS37B-202ENST00000371248 FBXL18Q96ME1 805 aa19.19■□□□□ 0.66
VPS37B-202ENST00000371248 TRAIPQ9BWF2 469 aa19.19■□□□□ 0.66
VPS37B-202ENST00000371248 RBSNQ9H1K0 784 aa19.19■□□□□ 0.66
VPS37B-202ENST00000371248 TSPYL2Q9H2G4 693 aaPredicted RBP19.19■□□□□ 0.66
VPS37B-202ENST00000371248 NXF3Q9H4D5 531 aaKnown RBP19.19■□□□□ 0.66
VPS37B-202ENST00000371248 THAP9Q9H5L6 903 aa19.19■□□□□ 0.66
VPS37B-202ENST00000371248 KIAA1586Q9HCI6 787 aa19.19■□□□□ 0.66
VPS37B-202ENST00000371248 SNTG2Q9NY99 539 aa19.19■□□□□ 0.66
VPS37B-202ENST00000371248 IPPQ9Y573 584 aa19.19■□□□□ 0.66
VPS37B-202ENST00000371248 NR2E3Q9Y5X4 410 aa19.19■□□□□ 0.66
VPS37B-202ENST00000371248 A0A0U1RQF3 1178 aa19.18■□□□□ 0.66
VPS37B-202ENST00000371248 GOLGA6L19H0YKK7 550 aa19.18■□□□□ 0.66
VPS37B-202ENST00000371248 TULP1O00294 542 aaPredicted RBP19.18■□□□□ 0.66
VPS37B-202ENST00000371248 PFKMP08237 780 aa19.18■□□□□ 0.66
VPS37B-202ENST00000371248 IKBKEQ14164 716 aa19.18■□□□□ 0.66
VPS37B-202ENST00000371248 SLC24A5Q71RS6 500 aa19.18■□□□□ 0.66
VPS37B-202ENST00000371248 IRF2BP1Q8IU81 584 aa19.18■□□□□ 0.66
VPS37B-202ENST00000371248 APOL6Q9BWW8 343 aa19.18■□□□□ 0.66
VPS37B-202ENST00000371248 CPSF3Q9UKF6 684 aaKnown RBP19.18■□□□□ 0.66
VPS37B-202ENST00000371248 ZNF233A6NK53 670 aa19.18■□□□□ 0.66
VPS37B-202ENST00000371248 GRM5P41594 1212 aa19.18■□□□□ 0.66
VPS37B-202ENST00000371248 RAB27AP51159 221 aa19.18■□□□□ 0.66
VPS37B-202ENST00000371248 FAM43BQ6ZT52 329 aaPredicted RBP19.18■□□□□ 0.66
VPS37B-202ENST00000371248 FAM186BQ8IYM0 893 aa19.18■□□□□ 0.66
VPS37B-202ENST00000371248 ACAP3Q96P50 834 aa19.18■□□□□ 0.66
VPS37B-202ENST00000371248 CCDC94Q9BW85 323 aaPredicted RBP19.18■□□□□ 0.66
VPS37B-202ENST00000371248 HSD3B7Q9H2F3 369 aa19.18■□□□□ 0.66
VPS37B-202ENST00000371248 RNF39Q9H2S5 420 aa19.18■□□□□ 0.66
VPS37B-202ENST00000371248 ANK1P16157 1881 aa19.17■□□□□ 0.66
VPS37B-202ENST00000371248 C9IYK1 514 aa19.17■□□□□ 0.66
VPS37B-202ENST00000371248 EPB41P11171 864 aaKnown RBP19.17■□□□□ 0.66
VPS37B-202ENST00000371248 CCDC40Q4G0X9 1142 aa19.17■□□□□ 0.66
VPS37B-202ENST00000371248 C16orf59Q7L2K0 433 aa19.17■□□□□ 0.66
VPS37B-202ENST00000371248 LBHD1Q9BQE6 289 aaPredicted RBP19.17■□□□□ 0.66
VPS37B-202ENST00000371248 MKNK1Q9BUB5 465 aa19.17■□□□□ 0.66
VPS37B-202ENST00000371248 C1orf112Q9NSG2 853 aa19.17■□□□□ 0.66
VPS37B-202ENST00000371248 SLC16A3O15427 465 aaKnown RBP19.16■□□□□ 0.66
VPS37B-202ENST00000371248 ZNF623O75123 536 aa19.16■□□□□ 0.66
VPS37B-202ENST00000371248 ADRB2P07550 413 aa19.16■□□□□ 0.66
VPS37B-202ENST00000371248 CLTAP09496 248 aa19.16■□□□□ 0.66
VPS37B-202ENST00000371248 SKIP12755 728 aa19.16■□□□□ 0.66
VPS37B-202ENST00000371248 AKAP5P24588 427 aa19.16■□□□□ 0.66
VPS37B-202ENST00000371248 KYAT1Q16773 422 aa19.16■□□□□ 0.66
VPS37B-202ENST00000371248 CDKAL1Q5VV42 579 aa19.16■□□□□ 0.66
VPS37B-202ENST00000371248 ECHDC2Q86YB7 292 aa19.16■□□□□ 0.66
VPS37B-202ENST00000371248 RNF169Q8NCN4 708 aa19.16■□□□□ 0.66
VPS37B-202ENST00000371248 CNOT6LQ96LI5 555 aaKnown RBP19.16■□□□□ 0.66
VPS37B-202ENST00000371248 RBAKQ9NYW8 714 aaPredicted RBP19.16■□□□□ 0.66
VPS37B-202ENST00000371248 PARP2Q9UGN5 583 aa19.16■□□□□ 0.66
VPS37B-202ENST00000371248 TTC3P53804 2025 aa19.16■□□□□ 0.66
VPS37B-202ENST00000371248 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.16■□□□□ 0.66
VPS37B-202ENST00000371248 GNA14O95837 355 aa19.16■□□□□ 0.66
VPS37B-202ENST00000371248 ITGA4P13612 1032 aa19.16■□□□□ 0.66
VPS37B-202ENST00000371248 TPM4P67936 248 aa19.16■□□□□ 0.66
VPS37B-202ENST00000371248 MRPL10Q7Z7H8 261 aaKnown RBP19.16■□□□□ 0.66
VPS37B-202ENST00000371248 FAM114A1Q8IWE2 563 aa19.16■□□□□ 0.66
VPS37B-202ENST00000371248 LPPQ93052 612 aa19.16■□□□□ 0.66
VPS37B-202ENST00000371248 FAM212AQ96EL1 285 aa19.16■□□□□ 0.66
VPS37B-202ENST00000371248 RPF1Q9H9Y2 349 aaKnown RBP19.16■□□□□ 0.66
VPS37B-202ENST00000371248 MAGEC2Q9UBF1 373 aaPredicted RBP19.16■□□□□ 0.66
VPS37B-202ENST00000371248 CEP290O15078 2479 aa19.15■□□□□ 0.66
VPS37B-202ENST00000371248 MAPK13O15264 365 aa19.15■□□□□ 0.66
VPS37B-202ENST00000371248 CXCL8P10145 99 aa19.15■□□□□ 0.66
VPS37B-202ENST00000371248 ACTN1P12814 892 aa19.15■□□□□ 0.66
VPS37B-202ENST00000371248 CDK11BP21127 795 aaKnown RBP19.15■□□□□ 0.66
VPS37B-202ENST00000371248 FAM189BP81408 668 aa19.15■□□□□ 0.66
VPS37B-202ENST00000371248 ENOX2Q16206 610 aaKnown RBP19.15■□□□□ 0.66
VPS37B-202ENST00000371248 FRMD5Q7Z6J6 570 aa19.15■□□□□ 0.66
VPS37B-202ENST00000371248 HACE1Q8IYU2 909 aa19.15■□□□□ 0.66
VPS37B-202ENST00000371248 ARMCX3Q9UH62 379 aaPredicted RBP19.15■□□□□ 0.66
VPS37B-202ENST00000371248 ABHD14A-ACY1A0A1B0GW23 586 aa19.15■□□□□ 0.66
VPS37B-202ENST00000371248 MEIS3P2A8K0S8 358 aa19.15■□□□□ 0.66
VPS37B-202ENST00000371248 KCNJ18B7U540 433 aa19.15■□□□□ 0.66
VPS37B-202ENST00000371248 FGBP02675 491 aa19.15■□□□□ 0.66
VPS37B-202ENST00000371248 ZNF18P17022 549 aa19.15■□□□□ 0.66
VPS37B-202ENST00000371248 YARSP54577 528 aaKnown RBP19.15■□□□□ 0.66
VPS37B-202ENST00000371248 EPHB4P54760 987 aa19.15■□□□□ 0.66
VPS37B-202ENST00000371248 CYP24A1Q07973 514 aa19.15■□□□□ 0.66
VPS37B-202ENST00000371248 KCNJ12Q14500 433 aa19.15■□□□□ 0.66
VPS37B-202ENST00000371248 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.15■□□□□ 0.66
VPS37B-202ENST00000371248 ZNF365Q70YC5 407 aa19.15■□□□□ 0.66
VPS37B-202ENST00000371248 OTOP2Q7RTS6 562 aa19.15■□□□□ 0.66
VPS37B-202ENST00000371248 PGBD4Q96DM1 585 aa19.15■□□□□ 0.66
VPS37B-202ENST00000371248 BORCS6Q96GS4 357 aa19.15■□□□□ 0.66
VPS37B-202ENST00000371248 MFSD14AQ96MC6 490 aa19.15■□□□□ 0.66
VPS37B-202ENST00000371248 CAPN15O75808 1086 aa19.14■□□□□ 0.65
VPS37B-202ENST00000371248 RECQL4O94761 1208 aa19.14■□□□□ 0.65
VPS37B-202ENST00000371248 ATP1A3P13637 1013 aa19.14■□□□□ 0.65
VPS37B-202ENST00000371248 ATF7P17544 494 aaPredicted RBP19.14■□□□□ 0.65
VPS37B-202ENST00000371248 SLC10A6Q3KNW5 377 aa19.14■□□□□ 0.65
VPS37B-202ENST00000371248 TCP11X2Q5H9J9 407 aa19.14■□□□□ 0.65
VPS37B-202ENST00000371248 INTS8Q75QN2 995 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms