RNA–Protein interactions for RNA: ENST00000371196.6

CTCFL-202, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-202ENST00000371196 CCDC125Q86Z20 511 aa12.41□□□□□ -0.42
CTCFL-202ENST00000371196 DTX3LQ8TDB6 740 aa12.41□□□□□ -0.42
CTCFL-202ENST00000371196 NCSTNQ92542 709 aa12.41□□□□□ -0.42
CTCFL-202ENST00000371196 DNAAF2Q9NVR5 837 aaKnown RBP12.41□□□□□ -0.42
CTCFL-202ENST00000371196 ASIC3Q9UHC3 531 aa12.41□□□□□ -0.42
CTCFL-202ENST00000371196 SLC4A7Q9Y6M7 1214 aa12.41□□□□□ -0.42
CTCFL-202ENST00000371196 GTPBP10A4D1E9 387 aaKnown RBP12.4□□□□□ -0.42
CTCFL-202ENST00000371196 SPAG7O75391 227 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 PSMG1O95456 288 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 ZCCHC18P0CG32 403 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 SETSIPP0DME0 302 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 CHRNB2P17787 502 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 HADHBP55084 474 aaKnown RBP12.4□□□□□ -0.42
CTCFL-202ENST00000371196 KRT17Q04695 432 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 SLC45A4Q5BKX6 768 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 USP17L2Q6R6M4 530 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 ZNF444Q8N0Y2 327 aaPredicted RBP12.4□□□□□ -0.42
CTCFL-202ENST00000371196 HAS1Q92839 578 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 PLEKHG4BQ96PX9 1271 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 ZNF184Q99676 751 aaPredicted RBP12.4□□□□□ -0.42
CTCFL-202ENST00000371196 NINJ2Q9NZG7 142 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 LARSQ9P2J5 1176 aaKnown RBP12.4□□□□□ -0.42
CTCFL-202ENST00000371196 DNAJC12Q9UKB3 198 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 PCDHA12Q9UN75 941 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 KDM3AQ9Y4C1 1321 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 ESYT2A0FGR8 921 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 ERVV-1B6SEH8 477 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 CCDC22O60826 627 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 PENKP01210 267 aaPredicted RBP12.4□□□□□ -0.42
CTCFL-202ENST00000371196 LYNP07948 512 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 COMTP21964 271 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 HOXD13P35453 343 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 SIX1Q15475 284 aaPredicted RBP12.4□□□□□ -0.42
CTCFL-202ENST00000371196 CERKLQ49MI3 558 aaPredicted RBP12.4□□□□□ -0.42
CTCFL-202ENST00000371196 HYIQ5T013 277 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 C12orf60Q5U649 245 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 HS2ST1Q7LGA3 356 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 MTDHQ86UE4 582 aaKnown RBP12.4□□□□□ -0.42
CTCFL-202ENST00000371196 NR1H4Q96RI1 486 aaPredicted RBP12.4□□□□□ -0.42
CTCFL-202ENST00000371196 CCDC77Q9BR77 488 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 PREBQ9HCU5 417 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 GALNT8Q9NY28 637 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 STX18Q9P2W9 335 aaKnown RBP12.4□□□□□ -0.42
CTCFL-202ENST00000371196 ZBTB1Q9Y2K1 713 aa12.4□□□□□ -0.42
CTCFL-202ENST00000371196 NHSL1Q5SYE7 1610 aa12.4□□□□□ -0.43
CTCFL-202ENST00000371196 PDXKO00764 312 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 CYP1A1P04798 512 aaPredicted RBP12.39□□□□□ -0.43
CTCFL-202ENST00000371196 SPARCL1Q14515 664 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 MESDQ14696 234 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 TMED2Q15363 201 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 ARSHQ5FYA8 562 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 RBM26Q5T8P6 1007 aaKnown RBP12.39□□□□□ -0.43
CTCFL-202ENST00000371196 MEX3CQ5U5Q3 659 aaKnown RBP12.39□□□□□ -0.43
CTCFL-202ENST00000371196 SPTY2D1Q68D10 685 aaPredicted RBP12.39□□□□□ -0.43
CTCFL-202ENST00000371196 RNF207Q6ZRF8 634 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 NLRP9Q7RTR0 991 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 LCA5Q86VQ0 697 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 STMN2Q93045 179 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 BTBD10Q9BSF8 475 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 MXD3Q9BW11 206 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 SYNCQ9H7C4 482 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 DNAJC18Q9H819 358 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 NIP7Q9Y221 180 aaKnown RBP eCLIP12.39□□□□□ -0.43
CTCFL-202ENST00000371196 PCDHB13Q9Y5F0 798 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 KIAA1551Q9HCM1 1747 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 NR3C1P04150 777 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 CTC1Q2NKJ3 1217 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 RGS9BPQ6ZS82 235 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 CLNKQ7Z7G1 428 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 C12orf50Q8NA57 414 aaPredicted RBP12.39□□□□□ -0.43
CTCFL-202ENST00000371196 WNT8AQ9H1J5 351 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 LRRC19Q9H756 370 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 TMCO1Q9UM00 188 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 POTEB3A0JP26 581 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 POTECB2RU33 542 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 GSC2O15499 205 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 MUTP22033 750 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 RPL13P26373 211 aaKnown RBP12.39□□□□□ -0.43
CTCFL-202ENST00000371196 ITGA8P53708 1063 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 PDK4Q16654 411 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 WDR72Q3MJ13 1102 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 POTEBQ6S5H4 581 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 DENND1AQ8TEH3 1009 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 SNF8Q96H20 258 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 UBN1Q9NPG3 1134 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 KRT82Q9NSB4 513 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 ZNF212Q9UDV6 495 aa12.39□□□□□ -0.43
CTCFL-202ENST00000371196 DDX25Q9UHL0 483 aaKnown RBP12.39□□□□□ -0.43
CTCFL-202ENST00000371196 ROBO3Q96MS0 1386 aa12.38□□□□□ -0.43
CTCFL-202ENST00000371196 C2CD2LO14523 706 aa12.38□□□□□ -0.43
CTCFL-202ENST00000371196 CLIC2O15247 247 aa12.38□□□□□ -0.43
CTCFL-202ENST00000371196 TNNI2P48788 182 aa12.38□□□□□ -0.43
CTCFL-202ENST00000371196 DPY19L2Q6NUT2 758 aa12.38□□□□□ -0.43
CTCFL-202ENST00000371196 KBTBD2Q8IY47 623 aa12.38□□□□□ -0.43
CTCFL-202ENST00000371196 C1orf54Q8WWF1 131 aa12.38□□□□□ -0.43
CTCFL-202ENST00000371196 CNKSR2Q8WXI2 1034 aa12.38□□□□□ -0.43
CTCFL-202ENST00000371196 FAM84BQ96KN1 310 aaPredicted RBP12.38□□□□□ -0.43
CTCFL-202ENST00000371196 PWWP2AQ96N64 755 aa12.38□□□□□ -0.43
CTCFL-202ENST00000371196 SLC16A3O15427 465 aaKnown RBP12.38□□□□□ -0.43
CTCFL-202ENST00000371196 EXOC3O60645 756 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms