RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 TAGAPQ8N103 731 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 EFHBQ8N7U6 833 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 TNIP3Q96KP6 325 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 AGBL1Q96MI9 1066 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 TRIM15Q9C019 465 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 SMARCAD1Q9H4L7 1026 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 ALG13Q9NP73 1137 aaKnown RBP9.05□□□□□ -0.96
ABCA4-201ENST00000370225 PARVAQ9NVD7 372 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 DCTN4Q9UJW0 460 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 QRICH2Q9H0J4 1663 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 LGALS16A8MUM7 142 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 CHGBP05060 677 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 NR1D1P20393 614 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 C6orf118Q5T5N4 469 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 ACAD11Q709F0 780 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 ATP11CQ8NB49 1132 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 MORC4Q8TE76 937 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 CLMNQ96JQ2 1002 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 SERPINI1Q99574 410 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 HSPBP1Q9NZL4 362 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 CPSF1Q10570 1443 aaKnown RBP9.05□□□□□ -0.96
ABCA4-201ENST00000370225 THPOP40225 353 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 C12orf60Q5U649 245 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 KCNV1Q6PIU1 500 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 RFX8Q6ZV50 586 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 C11orf96Q7Z7L8 435 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 PROM2Q8N271 834 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 SLC25A41Q8N5S1 370 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 DDX50Q9BQ39 737 aaKnown RBP9.05□□□□□ -0.96
ABCA4-201ENST00000370225 POLR3CQ9BUI4 534 aaPredicted RBP9.05□□□□□ -0.96
ABCA4-201ENST00000370225 HDAC6Q9UBN7 1215 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 GLI2P10070 1586 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 NPTXRO95502 500 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 KRT14P02533 472 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 BLVRAP53004 296 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 GYS2P54840 703 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 SESN2P58004 480 aaPredicted RBP9.04□□□□□ -0.96
ABCA4-201ENST00000370225 CDR2LQ86X02 465 aaPredicted RBP9.04□□□□□ -0.96
ABCA4-201ENST00000370225 UPF3AQ9H1J1 476 aaKnown RBP9.04□□□□□ -0.96
ABCA4-201ENST00000370225 CAPN10Q9HC96 672 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 FGFR1OP2Q9NVK5 253 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 MBD5Q9P267 1494 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 KCNA2P16389 499 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 MAP4P27816 1152 aaKnown RBP9.04□□□□□ -0.96
ABCA4-201ENST00000370225 GCKP35557 465 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 SOX11P35716 441 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 SREBF2Q12772 1141 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 SPDYAQ5MJ70 313 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 TTC13Q8NBP0 860 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 UBA3Q8TBC4 463 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 PITPNM3Q9BZ71 974 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 DEFB129Q9H1M3 183 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 APOBEC2Q9Y235 224 aaKnown RBP9.04□□□□□ -0.96
ABCA4-201ENST00000370225 STK36Q9NRP7 1315 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 ESYT3A0FGR9 886 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 CAPN15O75808 1086 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 CSE1LP55060 971 aaKnown RBP9.04□□□□□ -0.96
ABCA4-201ENST00000370225 ADCY2Q08462 1091 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 TWF1Q12792 350 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 KIZQ2M2Z5 673 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 ITPRIPL1Q6GPH6 555 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 DEFB132Q7Z7B7 95 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 MFN1Q8IWA4 741 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 HS6ST3Q8IZP7 471 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 ENTPD7Q9NQZ7 604 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 ADA2Q9NZK5 511 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 TRMT2AQ8IZ69 625 aaKnown RBP9.04□□□□□ -0.96
ABCA4-201ENST00000370225 ARL8AQ96BM9 186 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 ERLEC1Q96DZ1 483 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 NUDT12Q9BQG2 462 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 MTMR4Q9NYA4 1195 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 ZNF212Q9UDV6 495 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 ARHGAP10A1A4S6 786 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 SPDYE5A6NIY4 337 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 PODXLO00592 558 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 KRT7P08729 469 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 CETPP11597 493 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 USP11P51784 963 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 EMC2Q15006 297 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 SPDYE7PQ495Y7 208 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 TRIM54Q9BYV2 358 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 TRIM55Q9BYV6 548 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 TXLNGQ9NUQ3 528 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 KPNA7A9QM74 516 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 TLR2O60603 784 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 KRT38O76015 456 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 MMEP08473 750 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 HSD17B4P51659 736 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 EIF3EP60228 445 aaKnown RBP9.04□□□□□ -0.96
ABCA4-201ENST00000370225 PRKCEQ02156 737 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 CUL4AQ13619 759 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 SPARCL1Q14515 664 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 DGKDQ16760 1214 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 FAM118BQ9BPY3 351 aa9.04□□□□□ -0.96
ABCA4-201ENST00000370225 PRG3Q9Y2Y8 225 aaPredicted RBP9.04□□□□□ -0.96
ABCA4-201ENST00000370225 FAM205CA6NFA0 338 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 GOLGA8RI6L899 631 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 MAPK13O15264 365 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 ARSEP51690 589 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 EFNA5P52803 228 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms