RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 BMP6P22004 513 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 AKAP5P24588 427 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 NFKBIBQ15653 356 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 NFIL3Q16649 462 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 CLLU1OSQ5K130 101 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 FAM109BQ6ICB4 259 aaPredicted RBP16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 CAVIN1Q6NZI2 390 aaKnown RBP16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 CEP120Q8N960 986 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 MLKLQ8NB16 471 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 SP7Q8TDD2 431 aaPredicted RBP16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 CBWD1Q9BRT8 395 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 RNF39Q9H2S5 420 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 PLEKHA5Q9HAU0 1116 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 RNF19AQ9NV58 838 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 MSRAQ9UJ68 235 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 CPSF3Q9UKF6 684 aaKnown RBP16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 MEIS3P2A8K0S8 358 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 GRXCR1A8MXD5 290 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 EXTL3O43909 919 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 RECQL4O94761 1208 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 LETM1O95202 739 aaPredicted RBP16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 OSTNP61366 133 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 EDRF1Q3B7T1 1238 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 HABP4Q5JVS0 413 aaKnown RBP16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 CENPPQ6IPU0 288 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 FOXR2Q6PJQ5 311 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 SLC9A9Q8IVB4 645 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 LRRC43Q8N309 656 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 GPD1LQ8N335 351 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 URGCPQ8TCY9 931 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 HELQQ8TDG4 1101 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 CASD1Q96PB1 797 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 HSPBP1Q9NZL4 362 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 DACH1Q9UI36 760 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 PTPRSQ13332 1948 aa16.93■□□□□ 0.3
PRPF38B-202ENST00000370022 ARL5CA6NH57 179 aa16.93■□□□□ 0.3
PRPF38B-202ENST00000370022 TBKBP1A7MCY6 615 aa16.93■□□□□ 0.3
PRPF38B-202ENST00000370022 RPL13P26373 211 aaKnown RBP16.93■□□□□ 0.3
PRPF38B-202ENST00000370022 MLH1P40692 756 aa16.93■□□□□ 0.3
PRPF38B-202ENST00000370022 LRRC63Q05C16 580 aa16.93■□□□□ 0.3
PRPF38B-202ENST00000370022 BTG3Q14201 252 aaPredicted RBP16.93■□□□□ 0.3
PRPF38B-202ENST00000370022 NOMO2Q5JPE7 1267 aa16.93■□□□□ 0.3
PRPF38B-202ENST00000370022 SASS6Q6UVJ0 657 aa16.93■□□□□ 0.3
PRPF38B-202ENST00000370022 CD302Q8IX05 232 aa16.93■□□□□ 0.3
PRPF38B-202ENST00000370022 XXYLT1Q8NBI6 393 aa16.93■□□□□ 0.3
PRPF38B-202ENST00000370022 RPS6KC1Q96S38 1066 aa16.93■□□□□ 0.3
PRPF38B-202ENST00000370022 TSPAN18Q96SJ8 248 aa16.93■□□□□ 0.3
PRPF38B-202ENST00000370022 GAD1Q99259 594 aa16.93■□□□□ 0.3
PRPF38B-202ENST00000370022 TSG101Q99816 390 aa16.93■□□□□ 0.3
PRPF38B-202ENST00000370022 PBX4Q9BYU1 374 aa16.93■□□□□ 0.3
PRPF38B-202ENST00000370022 RPF1Q9H9Y2 349 aaKnown RBP16.93■□□□□ 0.3
PRPF38B-202ENST00000370022 BICDL2A1A5D9 508 aa16.92■□□□□ 0.3
PRPF38B-202ENST00000370022 CARNS1A5YM72 827 aa16.92■□□□□ 0.3
PRPF38B-202ENST00000370022 PPP1R3GB7ZBB8 358 aa16.92■□□□□ 0.3
PRPF38B-202ENST00000370022 RABGGTBP53611 331 aa16.92■□□□□ 0.3
PRPF38B-202ENST00000370022 NLRP12P59046 1061 aa16.92■□□□□ 0.3
PRPF38B-202ENST00000370022 ZCWPW2Q504Y3 356 aa16.92■□□□□ 0.3
PRPF38B-202ENST00000370022 XKR4Q5GH76 650 aa16.92■□□□□ 0.3
PRPF38B-202ENST00000370022 CT47A1Q5JQC4 288 aaPredicted RBP16.92■□□□□ 0.3
PRPF38B-202ENST00000370022 FIBCD1Q8N539 461 aa16.92■□□□□ 0.3
PRPF38B-202ENST00000370022 P2RX5Q93086 422 aa16.92■□□□□ 0.3
PRPF38B-202ENST00000370022 SNX27Q96L92 541 aa16.92■□□□□ 0.3
PRPF38B-202ENST00000370022 FBXL18Q96ME1 805 aa16.92■□□□□ 0.3
PRPF38B-202ENST00000370022 FAM213AQ9BRX8 229 aa16.92■□□□□ 0.3
PRPF38B-202ENST00000370022 SEMA6BQ9H3T3 888 aa16.92■□□□□ 0.3
PRPF38B-202ENST00000370022 PCIF1Q9H4Z3 704 aa16.92■□□□□ 0.3
PRPF38B-202ENST00000370022 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.92■□□□□ 0.3
PRPF38B-202ENST00000370022 CLIC2O15247 247 aa16.91■□□□□ 0.3
PRPF38B-202ENST00000370022 NR3C1P04150 777 aa16.91■□□□□ 0.3
PRPF38B-202ENST00000370022 ADRB2P07550 413 aa16.91■□□□□ 0.3
PRPF38B-202ENST00000370022 CD44P16070 742 aaKnown RBP16.91■□□□□ 0.3
PRPF38B-202ENST00000370022 CCNE1P24864 410 aa16.91■□□□□ 0.3
PRPF38B-202ENST00000370022 TNFSF9P41273 254 aa16.91■□□□□ 0.3
PRPF38B-202ENST00000370022 ACOT2P49753 483 aa16.91■□□□□ 0.3
PRPF38B-202ENST00000370022 PPP2R3AQ06190 1150 aa16.91■□□□□ 0.3
PRPF38B-202ENST00000370022 SEZ6Q53EL9 994 aa16.91■□□□□ 0.3
PRPF38B-202ENST00000370022 CRELD2Q6UXH1 353 aaPredicted RBP16.91■□□□□ 0.3
PRPF38B-202ENST00000370022 ALKAL1Q6UXT8 129 aa16.91■□□□□ 0.3
PRPF38B-202ENST00000370022 TMEM192Q8IY95 271 aa16.91■□□□□ 0.3
PRPF38B-202ENST00000370022 SAAL1Q96ER3 474 aa16.91■□□□□ 0.3
PRPF38B-202ENST00000370022 DMAC2Q9NW81 257 aa16.91■□□□□ 0.3
PRPF38B-202ENST00000370022 KLK14Q9P0G3 267 aa16.91■□□□□ 0.3
PRPF38B-202ENST00000370022 CNTN3Q9P232 1028 aa16.91■□□□□ 0.3
PRPF38B-202ENST00000370022 INPP5FQ9Y2H2 1132 aa16.91■□□□□ 0.3
PRPF38B-202ENST00000370022 ZNF233A6NK53 670 aa16.9■□□□□ 0.3
PRPF38B-202ENST00000370022 EXOC3O60645 756 aa16.9■□□□□ 0.3
PRPF38B-202ENST00000370022 IL18RAPO95256 599 aa16.9■□□□□ 0.3
PRPF38B-202ENST00000370022 CXCL8P10145 99 aa16.9■□□□□ 0.3
PRPF38B-202ENST00000370022 KCNE1P15382 129 aa16.9■□□□□ 0.3
PRPF38B-202ENST00000370022 GATMP50440 423 aa16.9■□□□□ 0.3
PRPF38B-202ENST00000370022 CYP2J2P51589 502 aa16.9■□□□□ 0.3
PRPF38B-202ENST00000370022 GRIK3Q13003 919 aa16.9■□□□□ 0.3
PRPF38B-202ENST00000370022 PAK1Q13153 545 aa16.9■□□□□ 0.3
PRPF38B-202ENST00000370022 ENOX2Q16206 610 aaKnown RBP16.9■□□□□ 0.3
PRPF38B-202ENST00000370022 SLC10A6Q3KNW5 377 aa16.9■□□□□ 0.3
PRPF38B-202ENST00000370022 ZBTB41Q5SVQ8 909 aa16.9■□□□□ 0.3
PRPF38B-202ENST00000370022 GSTCDQ8NEC7 633 aa16.9■□□□□ 0.3
PRPF38B-202ENST00000370022 ZFP42Q96MM3 310 aa16.9■□□□□ 0.3
PRPF38B-202ENST00000370022 ASB7Q9H672 318 aa16.9■□□□□ 0.3
PRPF38B-202ENST00000370022 TBC1D13Q9NVG8 400 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms