RNA–Protein interactions for RNA: ENST00000369797.7

PDCD11-201, Transcript of programmed cell death 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD11, Length 6,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-201ENST00000369797 RUBCNLQ9H714 662 aa11.94□□□□□ -0.5
PDCD11-201ENST00000369797 DDX56Q9NY93 547 aaKnown RBP11.94□□□□□ -0.5
PDCD11-201ENST00000369797 ZFP69BQ9UJL9 534 aa11.94□□□□□ -0.5
PDCD11-201ENST00000369797 CDV3Q9UKY7 258 aaKnown RBP11.94□□□□□ -0.5
PDCD11-201ENST00000369797 SPDYE5A6NIY4 337 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 MAP4P27816 1152 aaKnown RBP11.93□□□□□ -0.5
PDCD11-201ENST00000369797 SPDYE7PQ495Y7 208 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 TTC39CQ8N584 583 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 SH3TC2Q8TF17 1288 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 MUC3BQ9H195 1237 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 CYP4F11Q9HBI6 524 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 ESYT3A0FGR9 886 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 CCDC151A5D8V7 595 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 CLCN6P51797 869 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 EFNA5P52803 228 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 PMS2P54278 862 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 SNAPC2Q13487 334 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 EPHA7Q15375 998 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 IL31Q6EBC2 164 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 KCNV1Q6PIU1 500 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 STK36Q9NRP7 1315 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 GSG1L2A8MUP6 293 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 GFAPP14136 432 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 CEP55Q53EZ4 464 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 CCDC157Q569K6 752 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 NUDCD3Q8IVD9 361 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 GOLPH3LQ9H4A5 285 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 PARVAQ9NVD7 372 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 KDM5CP41229 1560 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 ATP8B1O43520 1251 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 FDX1P10109 184 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 WASHC5Q12768 1159 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 PDCLQ13371 301 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 TMED1Q13445 227 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 MGAT5BQ3V5L5 792 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 C1orf146Q5VVC0 180 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 PABPC5Q96DU9 382 aaKnown RBP11.93□□□□□ -0.5
PDCD11-201ENST00000369797 ARHGAP10A1A4S6 786 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 CLEC10AQ8IUN9 316 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 EFHBQ8N7U6 833 aa11.93□□□□□ -0.5
PDCD11-201ENST00000369797 A0A087WUV0 522 aaPredicted RBP11.92□□□□□ -0.5
PDCD11-201ENST00000369797 RPS6KA5O75582 802 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 MCF2P10911 925 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 OR1G1P47890 313 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 ACTR2P61160 394 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 EMBQ6PCB8 327 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 ANKMY2Q8IV38 441 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 GGA3Q9NZ52 723 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 ASAP2O43150 1006 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 MEI1Q5TIA1 1274 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 ASAP3Q8TDY4 903 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 PARK7Q99497 189 aaKnown RBP11.92□□□□□ -0.5
PDCD11-201ENST00000369797 KCNN4O15554 427 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 MYBL1P10243 752 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 GYS2P54840 703 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 EIF3EP60228 445 aaKnown RBP11.92□□□□□ -0.5
PDCD11-201ENST00000369797 MAGOHP61326 146 aaKnown RBP11.92□□□□□ -0.5
PDCD11-201ENST00000369797 SCARF1Q14162 830 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 CCDC85BQ15834 202 aaPredicted RBP11.92□□□□□ -0.5
PDCD11-201ENST00000369797 SPDYAQ5MJ70 313 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 ZNF579Q8NAF0 562 aaKnown RBP11.92□□□□□ -0.5
PDCD11-201ENST00000369797 TEX13BQ9BXU2 312 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 HPS4Q9NQG7 708 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 STX18Q9P2W9 335 aaKnown RBP11.92□□□□□ -0.5
PDCD11-201ENST00000369797 ERVK-7P63135 1459 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 ZFXP17010 805 aaPredicted RBP11.92□□□□□ -0.5
PDCD11-201ENST00000369797 CAV1Q03135 178 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 KYAT1Q16773 422 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 PPHLN1Q8NEY8 458 aaKnown RBP11.92□□□□□ -0.5
PDCD11-201ENST00000369797 TBC1D16Q8TBP0 767 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 KIFC3Q9BVG8 833 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 TMEM60Q9H2L4 133 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 ALG13Q9NP73 1137 aaKnown RBP11.92□□□□□ -0.5
PDCD11-201ENST00000369797 SNX5Q9Y5X3 404 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 CDHR2Q9BYE9 1310 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 C2CD2LO14523 706 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 TLR2O60603 784 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 ARSEP51690 589 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 USP11P51784 963 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 HUNKP57058 714 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 LRRC14Q15048 493 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 IER5Q5VY09 327 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 IZUMO3Q5VZ72 239 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 PATL1Q86TB9 770 aaKnown RBP11.92□□□□□ -0.5
PDCD11-201ENST00000369797 MB21D2Q8IYB1 491 aaPredicted RBP11.92□□□□□ -0.5
PDCD11-201ENST00000369797 NEDD1Q8NHV4 660 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 ZC3H15Q8WU90 426 aaKnown RBP11.92□□□□□ -0.5
PDCD11-201ENST00000369797 SEPT8Q92599 483 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 KATNAL1Q9BW62 490 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 ADAM33Q9BZ11 813 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 SH3BP1Q9Y3L3 701 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 PLEKHG2Q9H7P9 1386 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 GH1P01241 217 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 TMEM132DQ14C87 1099 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 KIZQ2M2Z5 673 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 BEND6Q5SZJ8 279 aaPredicted RBP11.92□□□□□ -0.5
PDCD11-201ENST00000369797 CCDC137Q6PK04 289 aaKnown RBP11.92□□□□□ -0.5
PDCD11-201ENST00000369797 CATSPER3Q86XQ3 398 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 ZNF280CQ8ND82 737 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 HPS3Q969F9 1004 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms