RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 SH3BP5LQ7L8J4 393 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 RFX6Q8HWS3 928 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 KSR1Q8IVT5 923 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 OR6J1Q8NGC5 347 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 NKX2-3Q8TAU0 364 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 FAM193BQ96PV7 902 aaPredicted RBP5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 TAF1DQ9H5J8 278 aaPredicted RBP5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 INTS13Q9NVM9 706 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 ARHGAP20Q9P2F6 1191 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 ATP8A1Q9Y2Q0 1164 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 MYH7P12883 1935 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 A0A087X0T9 212 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 RRN3P2A6NIE6 340 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 HMGB1P1B2RPK0 211 aaPredicted RBP5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 SGK1O00141 431 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 HLA-DRAP01903 254 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 MYL3P08590 195 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 KRT7P08729 469 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 FAM228BP0C875 321 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 PSMA2P25787 234 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 PTGER2P43116 358 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 HSD17B4P51659 736 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 HERVK_113P62684 666 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 ITIH3Q06033 890 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 STILQ15468 1287 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 UAP1Q16222 522 aaPredicted RBP5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 ZNF484Q5JVG2 852 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 TTC19Q6DKK2 380 aaPredicted RBP5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 LRRC55Q6ZSA7 311 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 USP50Q70EL3 339 aaPredicted RBP5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 MMGT1Q8N4V1 131 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 CCDC63Q8NA47 563 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 HNRNPLLQ8WVV9 542 aaKnown RBP5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 RNPC3Q96LT9 517 aaKnown RBP5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 ACAP3Q96P50 834 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 BEGAINQ9BUH8 593 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 KATNAL1Q9BW62 490 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 ASNSD1Q9NWL6 643 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 WDR35Q9P2L0 1181 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 LTBP4Q8N2S1 1624 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 ATP8B3O60423 1300 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 CCDC88AQ3V6T2 1871 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 A0A0A6YYK5 440 aaPredicted RBP5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 H7C0C1 242 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 M0R2N6 131 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 DDNO94850 711 aaPredicted RBP5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 PLEKP08567 350 aaPredicted RBP5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 GZMAP12544 262 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 ATP5OP48047 213 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 ATP1A2P50993 1020 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 ZBTB16Q05516 673 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 NNTQ13423 1086 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 TFDP2Q14188 446 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 BMT2Q1RMZ1 405 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 ZNF394Q53GI3 561 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 MUM1L1Q5H9M0 696 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 HHATQ5VTY9 493 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 FYB2Q5VWT5 728 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 POTEAQ6S8J7 498 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 KCTD6Q8NC69 237 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 COG1Q8WTW3 980 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 SLC35C1Q96A29 364 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 CABS1Q96KC9 395 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 ZNF560Q96MR9 790 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 PPP1R16BQ96T49 567 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 SENP7Q9BQF6 1050 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 CBWD1Q9BRT8 395 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 TARS2Q9BW92 718 aaKnown RBP5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 DNAJC18Q9H819 358 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 CNOT10Q9H9A5 744 aaKnown RBP5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 LRRC4Q9HBW1 653 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 GPRC5CQ9NQ84 441 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 A1CFQ9NQ94 594 aaKnown RBP5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 DDX56Q9NY93 547 aaKnown RBP5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 ABT1Q9ULW3 272 aaKnown RBP5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 CICQ96RK0 1608 aaPredicted RBP5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 MAPK13O15264 365 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 OGTO15294 1046 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 LYPLA2O95372 231 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 ARL4AP40617 200 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 ZNF280AP59817 542 aaPredicted RBP5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 RBP5P82980 135 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 SNX1Q13596 522 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 ATF7IP2Q5U623 682 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 MFSD14CQ5VZR4 134 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 BZW1Q7L1Q6 419 aaKnown RBP5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 RIOX2Q8IUF8 465 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 C7orf31Q8N865 590 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 LRRN4CLQ8ND94 238 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 OR6B3Q8NGW1 331 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 NSMCE1Q8WV22 266 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 FAM149B1Q96BN6 582 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 GTF3C4Q9UKN8 822 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 SIK3Q9Y2K2 1263 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 NFASCO94856 1347 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 F8VZ95 297 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 STRNO43815 780 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 HUS1O60921 280 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 TOM1L1O75674 476 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 SPATA31C1P0DKV0 1188 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms