RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 GTPBP10A4D1E9 387 aaKnown RBP13.14□□□□□ -0.31
PHGDH-201ENST00000369407 CYP26A1O43174 497 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 ZNF76P36508 570 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 LLGL2Q6P1M3 1020 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 SLC47A2Q86VL8 602 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 ZNF564Q8TBZ8 553 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-201ENST00000369407 LENG9Q96B70 501 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 NUDCD1Q96RS6 583 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 SH2D3AQ9BRG2 576 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 AGPAT3Q9NRZ7 376 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 FRMPD4Q14CM0 1322 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 EMSYQ7Z589 1322 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 MIF4GDA9UHW6 222 aaKnown RBP13.14□□□□□ -0.31
PHGDH-201ENST00000369407 PIAS1O75925 651 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 ADCY8P40145 1251 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 WDR4P57081 412 aaKnown RBP13.14□□□□□ -0.31
PHGDH-201ENST00000369407 EPC2Q52LR7 807 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 TRMT10CQ7L0Y3 403 aaKnown RBP13.14□□□□□ -0.31
PHGDH-201ENST00000369407 LONP2Q86WA8 852 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 FBF1Q8TES7 1133 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 DYDC2Q96IM9 177 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 SERPINB12Q96P63 405 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 ROPN1BQ9BZX4 212 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-201ENST00000369407 ROPN1Q9HAT0 212 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-201ENST00000369407 KCNQ5Q9NR82 932 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 NINJ2Q9NZG7 142 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 CHKBQ9Y259 395 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 NAV1Q8NEY1 1877 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 GSTTP1A0A1W2PQM5 241 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 A0A1W2PRG0 241 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 PEX11AO75192 247 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 TTC4O95801 387 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 ERFP50548 548 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 ZC3H12AQ5D1E8 599 aaKnown RBP13.14□□□□□ -0.31
PHGDH-201ENST00000369407 HS2ST1Q7LGA3 356 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 NOP9Q86U38 636 aaKnown RBP13.14□□□□□ -0.31
PHGDH-201ENST00000369407 FAM13CQ8NE31 585 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 FAM84AQ96KN4 292 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 DAGLAQ9Y4D2 1042 aa13.14□□□□□ -0.31
PHGDH-201ENST00000369407 RASA4BC9J798 803 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 RASA4O43374 803 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 GJC1P36383 396 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 NOVP48745 357 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 SCNN1DP51172 638 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 PPP3CAQ08209 521 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 KIF22Q14807 665 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 MTFR1Q15390 333 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 BMT2Q1RMZ1 405 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 ODR4Q5SWX8 454 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 PPP1R18Q6NYC8 613 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 CROCCP2Q86T23 111 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 FAM178BQ8IXR5 827 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 C4orf33Q8N1A6 199 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 ZNF653Q96CK0 615 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 R3HDM2Q9Y2K5 976 aaKnown RBP13.13□□□□□ -0.31
PHGDH-201ENST00000369407 DOT1LQ8TEK3 1739 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 A6NHS1 94 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 O00370 1275 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 SMIM24O75264 130 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 CCNB1P14635 433 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 TMEM63BQ5T3F8 832 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 C11orf63Q6NUN7 778 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 SLC5A5Q92911 643 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 SYT15Q9BQS2 421 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 RNPEPL1Q9HAU8 725 aa13.13□□□□□ -0.31
PHGDH-201ENST00000369407 POC1B-GALNT4F8VUJ3 575 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 RIMBP2O15034 1052 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 GNPATO15228 680 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 GNAZP19086 355 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 RPS6KA3P51812 740 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 CACNB3P54284 484 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 GTF2IP78347 998 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 MXRA7P84157 204 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 CYFIP1Q7L576 1253 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 LMO3Q8TAP4 145 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 RPGRQ92834 1020 aaKnown RBP13.12□□□□□ -0.31
PHGDH-201ENST00000369407 TBC1D10AQ9BXI6 508 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 NYXQ9GZU5 481 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 TMEM165Q9HC07 324 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 METTL5Q9NRN9 209 aaKnown RBP13.12□□□□□ -0.31
PHGDH-201ENST00000369407 ANAPC5Q9UJX4 755 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.12□□□□□ -0.31
PHGDH-201ENST00000369407 ATAD5Q96QE3 1844 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 GOLGA8IPA6NC78 632 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 GOLGA8JA6NMD2 632 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 HSPA6P17066 643 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 GBP1P32455 592 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 BFSP1Q12934 665 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 ZNF568Q3ZCX4 644 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 PPM1KQ8N3J5 372 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 CD101Q93033 1021 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 MAGEB18Q96M61 343 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 RPS6KC1Q96S38 1066 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 PARVGQ9HBI0 331 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 SERPINB13Q9UIV8 391 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 VAV3Q9UKW4 847 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 GRID1Q9ULK0 1009 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 WDR91A4D1P6 747 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 EYA4O95677 639 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 TPBGLP0DKB5 382 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms