RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 HNRNPH2P55795 449 aaKnown RBP19.21■□□□□ 0.67
SNX27-202ENST00000368841 BCAR1P56945 870 aa19.21■□□□□ 0.67
SNX27-202ENST00000368841 TTC23LQ6PF05 361 aa19.21■□□□□ 0.67
SNX27-202ENST00000368841 CCDC33Q8N5R6 958 aa19.21■□□□□ 0.67
SNX27-202ENST00000368841 SNF8Q96H20 258 aa19.21■□□□□ 0.67
SNX27-202ENST00000368841 TSC22D3Q99576 134 aa19.21■□□□□ 0.67
SNX27-202ENST00000368841 TEX12Q9BXU0 123 aa19.21■□□□□ 0.67
SNX27-202ENST00000368841 COL15A1P39059 1388 aa19.21■□□□□ 0.67
SNX27-202ENST00000368841 ARHGAP10A1A4S6 786 aa19.21■□□□□ 0.66
SNX27-202ENST00000368841 KLHL38Q2WGJ6 581 aa19.21■□□□□ 0.66
SNX27-202ENST00000368841 IL1RL2Q9HB29 575 aa19.21■□□□□ 0.66
SNX27-202ENST00000368841 CHORDC1Q9UHD1 332 aaPredicted RBP19.21■□□□□ 0.66
SNX27-202ENST00000368841 AKT1P31749 480 aa19.2■□□□□ 0.66
SNX27-202ENST00000368841 TPI1P60174 286 aa19.2■□□□□ 0.66
SNX27-202ENST00000368841 ACTR5Q9H9F9 607 aaPredicted RBP19.2■□□□□ 0.66
SNX27-202ENST00000368841 IGSF1Q8N6C5 1336 aa19.2■□□□□ 0.66
SNX27-202ENST00000368841 TYK2P29597 1187 aa19.2■□□□□ 0.66
SNX27-202ENST00000368841 DCUN1D1Q96GG9 259 aa19.2■□□□□ 0.66
SNX27-202ENST00000368841 MROH7-TTC4A0A0A0MT08 1334 aa19.2■□□□□ 0.66
SNX27-202ENST00000368841 RARBP10826 455 aa19.2■□□□□ 0.66
SNX27-202ENST00000368841 DHX40Q8IX18 779 aaKnown RBP19.2■□□□□ 0.66
SNX27-202ENST00000368841 NPHP4O75161 1426 aaPredicted RBP19.2■□□□□ 0.66
SNX27-202ENST00000368841 KIF1BO60333 1816 aa19.2■□□□□ 0.66
SNX27-202ENST00000368841 A0A0G2JLW4 131 aa19.2■□□□□ 0.66
SNX27-202ENST00000368841 GFAPP14136 432 aa19.2■□□□□ 0.66
SNX27-202ENST00000368841 BRAFP15056 766 aa19.2■□□□□ 0.66
SNX27-202ENST00000368841 OCA2Q04671 838 aa19.2■□□□□ 0.66
SNX27-202ENST00000368841 EFHBQ8N7U6 833 aa19.2■□□□□ 0.66
SNX27-202ENST00000368841 FAM167AQ96KS9 214 aa19.2■□□□□ 0.66
SNX27-202ENST00000368841 ACAP3Q96P50 834 aa19.2■□□□□ 0.66
SNX27-202ENST00000368841 PYGBP11216 843 aa19.2■□□□□ 0.66
SNX27-202ENST00000368841 TJAP1Q5JTD0 557 aa19.2■□□□□ 0.66
SNX27-202ENST00000368841 PKN3Q6P5Z2 889 aa19.2■□□□□ 0.66
SNX27-202ENST00000368841 MCPH1Q8NEM0 835 aa19.2■□□□□ 0.66
SNX27-202ENST00000368841 ACSF2Q96CM8 615 aaPredicted RBP19.2■□□□□ 0.66
SNX27-202ENST00000368841 SMARCAL1Q9NZC9 954 aa19.2■□□□□ 0.66
SNX27-202ENST00000368841 ARFIP2P53365 341 aa19.19■□□□□ 0.66
SNX27-202ENST00000368841 RRM2BQ7LG56 351 aa19.19■□□□□ 0.66
SNX27-202ENST00000368841 ROBO2Q9HCK4 1378 aa19.19■□□□□ 0.66
SNX27-202ENST00000368841 TADA2AO75478 443 aa19.19■□□□□ 0.66
SNX27-202ENST00000368841 ARL6IP4Q66PJ3 421 aaKnown RBP19.19■□□□□ 0.66
SNX27-202ENST00000368841 YY1AP1Q9H869 796 aa19.19■□□□□ 0.66
SNX27-202ENST00000368841 F5H6K3 240 aa19.19■□□□□ 0.66
SNX27-202ENST00000368841 DGKIO75912 1065 aa19.19■□□□□ 0.66
SNX27-202ENST00000368841 MYO1DO94832 1006 aa19.19■□□□□ 0.66
SNX27-202ENST00000368841 RALAP11233 206 aa19.19■□□□□ 0.66
SNX27-202ENST00000368841 KLRC3Q07444 240 aa19.19■□□□□ 0.66
SNX27-202ENST00000368841 LRRC23Q53EV4 343 aaPredicted RBP19.19■□□□□ 0.66
SNX27-202ENST00000368841 RAD18Q9NS91 495 aa19.19■□□□□ 0.66
SNX27-202ENST00000368841 TRAF3IP3Q9Y228 551 aa19.19■□□□□ 0.66
SNX27-202ENST00000368841 ATMINO43313 823 aaPredicted RBP19.19■□□□□ 0.66
SNX27-202ENST00000368841 AKR1B1P15121 316 aa19.19■□□□□ 0.66
SNX27-202ENST00000368841 PDAP1Q13442 181 aaKnown RBP19.19■□□□□ 0.66
SNX27-202ENST00000368841 MTF1Q14872 753 aa19.19■□□□□ 0.66
SNX27-202ENST00000368841 MFN1Q8IWA4 741 aa19.19■□□□□ 0.66
SNX27-202ENST00000368841 DTX3LQ8TDB6 740 aa19.19■□□□□ 0.66
SNX27-202ENST00000368841 ZNF212Q9UDV6 495 aa19.19■□□□□ 0.66
SNX27-202ENST00000368841 AMHR2Q16671 573 aa19.19■□□□□ 0.66
SNX27-202ENST00000368841 SNX31Q8N9S9 440 aa19.19■□□□□ 0.66
SNX27-202ENST00000368841 ASPSCR1Q9BZE9 553 aa19.19■□□□□ 0.66
SNX27-202ENST00000368841 SYTL2Q9HCH5 934 aa19.19■□□□□ 0.66
SNX27-202ENST00000368841 DCP1AQ9NPI6 582 aaPredicted RBP19.19■□□□□ 0.66
SNX27-202ENST00000368841 DOLKQ9UPQ8 538 aa19.19■□□□□ 0.66
SNX27-202ENST00000368841 KCNQ2O43526 872 aa19.19■□□□□ 0.66
SNX27-202ENST00000368841 NPC1L1Q9UHC9 1359 aa19.18■□□□□ 0.66
SNX27-202ENST00000368841 P4HBP07237 508 aaKnown RBP19.18■□□□□ 0.66
SNX27-202ENST00000368841 PWP1Q13610 501 aa19.18■□□□□ 0.66
SNX27-202ENST00000368841 HIF1AQ16665 826 aa19.18■□□□□ 0.66
SNX27-202ENST00000368841 ZMAT2Q96NC0 199 aaKnown RBP19.18■□□□□ 0.66
SNX27-202ENST00000368841 MAGEB5Q9BZ81 275 aa19.18■□□□□ 0.66
SNX27-202ENST00000368841 TMEM161AQ9NX61 479 aa19.18■□□□□ 0.66
SNX27-202ENST00000368841 STAP1Q9ULZ2 295 aa19.18■□□□□ 0.66
SNX27-202ENST00000368841 ICA1LQ8NDH6 482 aa19.18■□□□□ 0.66
SNX27-202ENST00000368841 LRRC37BQ96QE4 947 aa19.18■□□□□ 0.66
SNX27-202ENST00000368841 RNF14Q9UBS8 474 aa19.18■□□□□ 0.66
SNX27-202ENST00000368841 UNC13AQ9UPW8 1703 aa19.18■□□□□ 0.66
SNX27-202ENST00000368841 HS6ST3Q8IZP7 471 aa19.18■□□□□ 0.66
SNX27-202ENST00000368841 MCEEQ96PE7 176 aa19.18■□□□□ 0.66
SNX27-202ENST00000368841 AMACRQ9UHK6 382 aa19.18■□□□□ 0.66
SNX27-202ENST00000368841 DBR1Q9UK59 544 aaKnown RBP19.18■□□□□ 0.66
SNX27-202ENST00000368841 TXNP10599 105 aaKnown RBP19.18■□□□□ 0.66
SNX27-202ENST00000368841 TFDP2Q14188 446 aa19.18■□□□□ 0.66
SNX27-202ENST00000368841 KRT72Q14CN4 511 aa19.18■□□□□ 0.66
SNX27-202ENST00000368841 LONRF1Q17RB8 773 aa19.18■□□□□ 0.66
SNX27-202ENST00000368841 SMTNL2Q2TAL5 461 aa19.18■□□□□ 0.66
SNX27-202ENST00000368841 KIFC3Q9BVG8 833 aa19.18■□□□□ 0.66
SNX27-202ENST00000368841 PRKCBP05771 671 aa19.17■□□□□ 0.66
SNX27-202ENST00000368841 MAP4P27816 1152 aaKnown RBP19.17■□□□□ 0.66
SNX27-202ENST00000368841 SH3BGRP55822 239 aaPredicted RBP19.17■□□□□ 0.66
SNX27-202ENST00000368841 CCDC144BQ3MJ40 725 aa19.17■□□□□ 0.66
SNX27-202ENST00000368841 NPHS2Q9NP85 383 aa19.17■□□□□ 0.66
SNX27-202ENST00000368841 AGAP1Q9UPQ3 857 aa19.17■□□□□ 0.66
SNX27-202ENST00000368841 PPP2R2AP63151 447 aa19.17■□□□□ 0.66
SNX27-202ENST00000368841 PLA2G4FQ68DD2 849 aa19.17■□□□□ 0.66
SNX27-202ENST00000368841 UBA3Q8TBC4 463 aa19.17■□□□□ 0.66
SNX27-202ENST00000368841 OSBPL1AQ9BXW6 950 aa19.17■□□□□ 0.66
SNX27-202ENST00000368841 TBC1D22BQ9NU19 505 aa19.17■□□□□ 0.66
SNX27-202ENST00000368841 GRM4Q14833 912 aa19.17■□□□□ 0.66
SNX27-202ENST00000368841 TRIM51Q9BSJ1 452 aa19.17■□□□□ 0.66
SNX27-202ENST00000368841 AFF2P51816 1311 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms