RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 GCOM2Q9BZD3 368 aaPredicted RBP21.08■□□□□ 0.97
CHTOP-204ENST00000368694 NUCKS1Q9H1E3 243 aaKnown RBP21.08■□□□□ 0.97
CHTOP-204ENST00000368694 TMEM8AQ9HCN3 771 aa21.08■□□□□ 0.97
CHTOP-204ENST00000368694 SIX2Q9NPC8 291 aa21.08■□□□□ 0.97
CHTOP-204ENST00000368694 SPTLC3Q9NUV7 552 aa21.08■□□□□ 0.97
CHTOP-204ENST00000368694 PLAGL2Q9UPG8 496 aa21.08■□□□□ 0.97
CHTOP-204ENST00000368694 TNFSF13BQ9Y275 285 aa21.08■□□□□ 0.97
CHTOP-204ENST00000368694 DYNC1I1O14576 645 aa21.08■□□□□ 0.96
CHTOP-204ENST00000368694 GPR32O75388 356 aa21.08■□□□□ 0.96
CHTOP-204ENST00000368694 TNNI1P19237 187 aa21.08■□□□□ 0.96
CHTOP-204ENST00000368694 HOXC8P31273 242 aa21.08■□□□□ 0.96
CHTOP-204ENST00000368694 TNFSF9P41273 254 aa21.08■□□□□ 0.96
CHTOP-204ENST00000368694 ENPEPQ07075 957 aa21.08■□□□□ 0.96
CHTOP-204ENST00000368694 RAPGEF1Q13905 1077 aa21.08■□□□□ 0.96
CHTOP-204ENST00000368694 AMHR2Q16671 573 aa21.08■□□□□ 0.96
CHTOP-204ENST00000368694 EEF1DP3Q658K8 133 aa21.08■□□□□ 0.96
CHTOP-204ENST00000368694 RNF180Q86T96 592 aa21.08■□□□□ 0.96
CHTOP-204ENST00000368694 PCSK9Q8NBP7 692 aaKnown RBP21.08■□□□□ 0.96
CHTOP-204ENST00000368694 ADAMTS10Q9H324 1103 aa21.08■□□□□ 0.96
CHTOP-204ENST00000368694 PDE11AQ9HCR9 933 aa21.08■□□□□ 0.96
CHTOP-204ENST00000368694 PTPRHQ9HD43 1115 aa21.08■□□□□ 0.96
CHTOP-204ENST00000368694 GTF2IRD1Q9UHL9 959 aa21.08■□□□□ 0.96
CHTOP-204ENST00000368694 ABLIM1O14639 778 aa21.07■□□□□ 0.96
CHTOP-204ENST00000368694 CST5P28325 142 aaPredicted RBP21.07■□□□□ 0.96
CHTOP-204ENST00000368694 MCCD1P59942 119 aaPredicted RBP21.07■□□□□ 0.96
CHTOP-204ENST00000368694 DPY19L2P1Q6NXN4 242 aa21.07■□□□□ 0.96
CHTOP-204ENST00000368694 MTERF4Q7Z6M4 381 aaKnown RBP21.07■□□□□ 0.96
CHTOP-204ENST00000368694 THNSL1Q8IYQ7 743 aa21.07■□□□□ 0.96
CHTOP-204ENST00000368694 DESI2Q9BSY9 194 aa21.07■□□□□ 0.96
CHTOP-204ENST00000368694 HMX1Q9NP08 348 aaPredicted RBP21.07■□□□□ 0.96
CHTOP-204ENST00000368694 PTCH2Q9Y6C5 1203 aa21.07■□□□□ 0.96
CHTOP-204ENST00000368694 FAM189A1O60320 539 aa21.06■□□□□ 0.96
CHTOP-204ENST00000368694 ARF4P18085 180 aaPredicted RBP21.06■□□□□ 0.96
CHTOP-204ENST00000368694 FGFR4P22455 802 aa21.06■□□□□ 0.96
CHTOP-204ENST00000368694 GTF2H1P32780 548 aa21.06■□□□□ 0.96
CHTOP-204ENST00000368694 SFMBT2Q5VUG0 894 aa21.06■□□□□ 0.96
CHTOP-204ENST00000368694 LMBRD2Q68DH5 695 aaPredicted RBP21.06■□□□□ 0.96
CHTOP-204ENST00000368694 GJB7Q6PEY0 223 aa21.06■□□□□ 0.96
CHTOP-204ENST00000368694 EHBP1Q8NDI1 1231 aa21.06■□□□□ 0.96
CHTOP-204ENST00000368694 CDT1Q9H211 546 aa21.06■□□□□ 0.96
CHTOP-204ENST00000368694 HNRNPH3P31942 346 aaKnown RBP21.06■□□□□ 0.96
CHTOP-204ENST00000368694 WNT7BP56706 349 aa21.06■□□□□ 0.96
CHTOP-204ENST00000368694 OSTNP61366 133 aa21.06■□□□□ 0.96
CHTOP-204ENST00000368694 EPC2Q52LR7 807 aa21.06■□□□□ 0.96
CHTOP-204ENST00000368694 VTI1AQ96AJ9 217 aa21.06■□□□□ 0.96
CHTOP-204ENST00000368694 FAM212AQ96EL1 285 aa21.06■□□□□ 0.96
CHTOP-204ENST00000368694 CDHR5Q9HBB8 845 aa21.06■□□□□ 0.96
CHTOP-204ENST00000368694 APEX2Q9UBZ4 518 aa21.06■□□□□ 0.96
CHTOP-204ENST00000368694 FBXL5Q9UKA1 691 aa21.06■□□□□ 0.96
CHTOP-204ENST00000368694 FRMPD3Q5JV73 1810 aa21.06■□□□□ 0.96
CHTOP-204ENST00000368694 PMM2O15305 246 aa21.05■□□□□ 0.96
CHTOP-204ENST00000368694 CCP110O43303 1012 aa21.05■□□□□ 0.96
CHTOP-204ENST00000368694 TSPAN1O60635 241 aa21.05■□□□□ 0.96
CHTOP-204ENST00000368694 GDF6Q6KF10 455 aaPredicted RBP21.05■□□□□ 0.96
CHTOP-204ENST00000368694 TAF2Q6P1X5 1199 aa21.05■□□□□ 0.96
CHTOP-204ENST00000368694 BRSK2Q8IWQ3 736 aa21.05■□□□□ 0.96
CHTOP-204ENST00000368694 PDZD7Q9H5P4 517 aa21.05■□□□□ 0.96
CHTOP-204ENST00000368694 PPP2R2CQ9Y2T4 447 aa21.05■□□□□ 0.96
CHTOP-204ENST00000368694 ZSCAN12O43309 604 aa21.05■□□□□ 0.96
CHTOP-204ENST00000368694 ARID5AQ03989 594 aa21.05■□□□□ 0.96
CHTOP-204ENST00000368694 IQCEQ6IPM2 695 aa21.05■□□□□ 0.96
CHTOP-204ENST00000368694 CCSAPQ6IQ19 270 aaPredicted RBP21.05■□□□□ 0.96
CHTOP-204ENST00000368694 SV2AQ7L0J3 742 aa21.05■□□□□ 0.96
CHTOP-204ENST00000368694 CATSPER4Q7RTX7 472 aa21.05■□□□□ 0.96
CHTOP-204ENST00000368694 LMO3Q8TAP4 145 aa21.05■□□□□ 0.96
CHTOP-204ENST00000368694 NHEJ1Q9H9Q4 299 aaPredicted RBP21.05■□□□□ 0.96
CHTOP-204ENST00000368694 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.05■□□□□ 0.966e-8■■■■■ 32.4
CHTOP-204ENST00000368694 AJAP1Q9UKB5 411 aaPredicted RBP21.05■□□□□ 0.96
CHTOP-204ENST00000368694 NCBP1Q09161 790 aaKnown RBP21.04■□□□□ 0.96
CHTOP-204ENST00000368694 NME8Q8N427 588 aa21.04■□□□□ 0.96
CHTOP-204ENST00000368694 CEP120Q8N960 986 aa21.04■□□□□ 0.96
CHTOP-204ENST00000368694 FBXL13Q8NEE6 735 aa21.04■□□□□ 0.96
CHTOP-204ENST00000368694 FAM84AQ96KN4 292 aa21.04■□□□□ 0.96
CHTOP-204ENST00000368694 PPP1R13BQ96KQ4 1090 aa21.04■□□□□ 0.96
CHTOP-204ENST00000368694 C16orf45Q96MC5 204 aaPredicted RBP21.04■□□□□ 0.96
CHTOP-204ENST00000368694 ADPGKQ9BRR6 497 aa21.04■□□□□ 0.96
CHTOP-204ENST00000368694 KCND1Q9NSA2 647 aa21.04■□□□□ 0.96
CHTOP-204ENST00000368694 CPSF3Q9UKF6 684 aaKnown RBP21.04■□□□□ 0.96
CHTOP-204ENST00000368694 LRRN2O75325 713 aa21.03■□□□□ 0.96
CHTOP-204ENST00000368694 CCDC175P0C221 793 aa21.03■□□□□ 0.96
CHTOP-204ENST00000368694 DARSP14868 501 aaKnown RBP21.03■□□□□ 0.96
CHTOP-204ENST00000368694 EIF4BP23588 611 aaKnown RBP21.03■□□□□ 0.96
CHTOP-204ENST00000368694 CLDN10P78369 228 aa21.03■□□□□ 0.96
CHTOP-204ENST00000368694 CDK17Q00537 523 aa21.03■□□□□ 0.96
CHTOP-204ENST00000368694 TDRD12Q587J7 1177 aaKnown RBP21.03■□□□□ 0.96
CHTOP-204ENST00000368694 DNTTIP2Q5QJE6 756 aaKnown RBP21.03■□□□□ 0.96
CHTOP-204ENST00000368694 TAS1R2Q8TE23 839 aa21.03■□□□□ 0.96
CHTOP-204ENST00000368694 SYN2Q92777 582 aaPredicted RBP21.03■□□□□ 0.96
CHTOP-204ENST00000368694 CGRRF1Q99675 332 aa21.03■□□□□ 0.96
CHTOP-204ENST00000368694 DEF6Q9H4E7 631 aa21.03■□□□□ 0.96
CHTOP-204ENST00000368694 DNAJC12Q9UKB3 198 aa21.03■□□□□ 0.96
CHTOP-204ENST00000368694 NDUFA10O95299 355 aa21.03■□□□□ 0.96
CHTOP-204ENST00000368694 PLEKP08567 350 aaPredicted RBP21.03■□□□□ 0.96
CHTOP-204ENST00000368694 MCF2P10911 925 aa21.03■□□□□ 0.96
CHTOP-204ENST00000368694 HSPA6P17066 643 aa21.03■□□□□ 0.96
CHTOP-204ENST00000368694 CYLC1P35663 651 aaPredicted RBP21.03■□□□□ 0.96
CHTOP-204ENST00000368694 BIRC3Q13489 604 aa21.03■□□□□ 0.96
CHTOP-204ENST00000368694 SH3TC2Q8TF17 1288 aa21.03■□□□□ 0.96
CHTOP-204ENST00000368694 ZNF516Q92618 1163 aa21.03■□□□□ 0.96
CHTOP-204ENST00000368694 CCDC42Q96M95 316 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms