RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 CRELD2Q6UXH1 353 aaPredicted RBP13.38□□□□□ -0.27
TUBE1-202ENST00000368662 BRSK2Q8IWQ3 736 aa13.38□□□□□ -0.27
TUBE1-202ENST00000368662 IQCDQ96DY2 449 aa13.38□□□□□ -0.27
TUBE1-202ENST00000368662 FNBP1Q96RU3 617 aa13.38□□□□□ -0.27
TUBE1-202ENST00000368662 CPSF3Q9UKF6 684 aaKnown RBP13.38□□□□□ -0.27
TUBE1-202ENST00000368662 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.38□□□□□ -0.273e-7■□□□□ 8.2
TUBE1-202ENST00000368662 PQBP1O60828 265 aaKnown RBP13.37□□□□□ -0.27
TUBE1-202ENST00000368662 TRIM14Q14142 442 aa13.37□□□□□ -0.27
TUBE1-202ENST00000368662 ZNF618Q5T7W0 954 aa13.37□□□□□ -0.27
TUBE1-202ENST00000368662 TMC6Q7Z403 805 aa13.37□□□□□ -0.27
TUBE1-202ENST00000368662 THNSL1Q8IYQ7 743 aa13.37□□□□□ -0.27
TUBE1-202ENST00000368662 TRIM6Q9C030 488 aaPredicted RBP13.37□□□□□ -0.27
TUBE1-202ENST00000368662 C11orf49Q9H6J7 331 aa13.37□□□□□ -0.27
TUBE1-202ENST00000368662 ST3GAL5Q9UNP4 418 aa13.37□□□□□ -0.27
TUBE1-202ENST00000368662 PMM2O15305 246 aa13.37□□□□□ -0.27
TUBE1-202ENST00000368662 IL18RAPO95256 599 aa13.37□□□□□ -0.27
TUBE1-202ENST00000368662 SELPP16109 830 aa13.37□□□□□ -0.27
TUBE1-202ENST00000368662 FMO5P49326 533 aa13.37□□□□□ -0.27
TUBE1-202ENST00000368662 AP3M2P53677 418 aa13.37□□□□□ -0.27
TUBE1-202ENST00000368662 ATN1P54259 1190 aaPredicted RBP13.37□□□□□ -0.27
TUBE1-202ENST00000368662 PAK2Q13177 524 aa13.37□□□□□ -0.27
TUBE1-202ENST00000368662 NECAB2Q7Z6G3 386 aa13.37□□□□□ -0.27
TUBE1-202ENST00000368662 CDR2LQ86X02 465 aaPredicted RBP13.37□□□□□ -0.27
TUBE1-202ENST00000368662 NUP58Q9BVL2 599 aa13.37□□□□□ -0.27
TUBE1-202ENST00000368662 RPF1Q9H9Y2 349 aaKnown RBP13.37□□□□□ -0.27
TUBE1-202ENST00000368662 TPM1P09493 284 aa13.36□□□□□ -0.27
TUBE1-202ENST00000368662 STAG3L1P0CL83 205 aa13.36□□□□□ -0.27
TUBE1-202ENST00000368662 ZSCAN20P17040 1043 aaPredicted RBP13.36□□□□□ -0.27
TUBE1-202ENST00000368662 GRM5P41594 1212 aa13.36□□□□□ -0.27
TUBE1-202ENST00000368662 CLDN10P78369 228 aa13.36□□□□□ -0.27
TUBE1-202ENST00000368662 NFX1Q12986 1120 aaKnown RBP13.36□□□□□ -0.27
TUBE1-202ENST00000368662 SPC24Q8NBT2 197 aa13.36□□□□□ -0.27
TUBE1-202ENST00000368662 DIS3LQ8TF46 1054 aaKnown RBP13.36□□□□□ -0.27
TUBE1-202ENST00000368662 CCDC127Q96BQ5 260 aa13.36□□□□□ -0.27
TUBE1-202ENST00000368662 CCDC94Q9BW85 323 aaPredicted RBP13.36□□□□□ -0.27
TUBE1-202ENST00000368662 LRRIQ3A6PVS8 624 aaPredicted RBP13.36□□□□□ -0.27
TUBE1-202ENST00000368662 PARNO95453 639 aaKnown RBP13.36□□□□□ -0.27
TUBE1-202ENST00000368662 NPTXRO95502 500 aa13.36□□□□□ -0.27
TUBE1-202ENST00000368662 PTMAP06454 111 aaKnown RBP13.36□□□□□ -0.27
TUBE1-202ENST00000368662 TRIM49P0CI25 452 aa13.36□□□□□ -0.27
TUBE1-202ENST00000368662 TRIM49CP0CI26 452 aa13.36□□□□□ -0.27
TUBE1-202ENST00000368662 DLATP10515 647 aaKnown RBP13.36□□□□□ -0.27
TUBE1-202ENST00000368662 GHRP10912 638 aa13.36□□□□□ -0.27
TUBE1-202ENST00000368662 TNFSF9P41273 254 aa13.36□□□□□ -0.27
TUBE1-202ENST00000368662 GSDMDP57764 484 aa13.36□□□□□ -0.27
TUBE1-202ENST00000368662 DLG4P78352 724 aa13.36□□□□□ -0.27
TUBE1-202ENST00000368662 LPIN1Q14693 890 aa13.36□□□□□ -0.27
TUBE1-202ENST00000368662 SYCP1Q15431 976 aa13.36□□□□□ -0.27
TUBE1-202ENST00000368662 ZBTB41Q5SVQ8 909 aa13.36□□□□□ -0.27
TUBE1-202ENST00000368662 KRT39Q6A163 491 aa13.36□□□□□ -0.27
TUBE1-202ENST00000368662 GBP6Q6ZN66 633 aa13.36□□□□□ -0.27
TUBE1-202ENST00000368662 LRRC8DQ7L1W4 858 aa13.36□□□□□ -0.27
TUBE1-202ENST00000368662 PAWRQ96IZ0 340 aaKnown RBP13.36□□□□□ -0.27
TUBE1-202ENST00000368662 PCMTD1Q96MG8 357 aaPredicted RBP13.36□□□□□ -0.27
TUBE1-202ENST00000368662 ACAP3Q96P50 834 aa13.36□□□□□ -0.27
TUBE1-202ENST00000368662 TMEM8AQ9HCN3 771 aa13.36□□□□□ -0.27
TUBE1-202ENST00000368662 ERVK-5Q9HDB9 667 aa13.36□□□□□ -0.27
TUBE1-202ENST00000368662 PADI3Q9ULW8 664 aa13.36□□□□□ -0.27
TUBE1-202ENST00000368662 TNNI1P19237 187 aa13.35□□□□□ -0.27
TUBE1-202ENST00000368662 MXI1P50539 228 aa13.35□□□□□ -0.27
TUBE1-202ENST00000368662 EXOC3L4Q17RC7 722 aa13.35□□□□□ -0.27
TUBE1-202ENST00000368662 SEZ6Q53EL9 994 aa13.35□□□□□ -0.27
TUBE1-202ENST00000368662 FIGNQ5HY92 759 aa13.35□□□□□ -0.27
TUBE1-202ENST00000368662 TWF2Q6IBS0 349 aaKnown RBP13.35□□□□□ -0.27
TUBE1-202ENST00000368662 TRAF7Q6Q0C0 670 aa13.35□□□□□ -0.27
TUBE1-202ENST00000368662 PPFIBP1Q86W92 1011 aa13.35□□□□□ -0.27
TUBE1-202ENST00000368662 WDR49Q8IV35 697 aa13.35□□□□□ -0.27
TUBE1-202ENST00000368662 CD302Q8IX05 232 aa13.35□□□□□ -0.27
TUBE1-202ENST00000368662 PLEKHO2Q8TD55 490 aa13.35□□□□□ -0.27
TUBE1-202ENST00000368662 TRAIPQ9BWF2 469 aa13.35□□□□□ -0.27
TUBE1-202ENST00000368662 ASB7Q9H672 318 aa13.35□□□□□ -0.27
TUBE1-202ENST00000368662 PDE11AQ9HCR9 933 aa13.35□□□□□ -0.27
TUBE1-202ENST00000368662 TRIM21P19474 475 aaKnown RBP13.34□□□□□ -0.27
TUBE1-202ENST00000368662 CD52P31358 61 aa13.34□□□□□ -0.27
TUBE1-202ENST00000368662 YARSP54577 528 aaKnown RBP13.34□□□□□ -0.27
TUBE1-202ENST00000368662 OSTNP61366 133 aa13.34□□□□□ -0.27
TUBE1-202ENST00000368662 MYL7Q01449 175 aa13.34□□□□□ -0.27
TUBE1-202ENST00000368662 TLE2Q04725 743 aa13.34□□□□□ -0.27
TUBE1-202ENST00000368662 ENOX2Q16206 610 aaKnown RBP13.34□□□□□ -0.27
TUBE1-202ENST00000368662 TRIM60Q495X7 471 aa13.34□□□□□ -0.27
TUBE1-202ENST00000368662 C1orf220Q5T0J3 134 aa13.34□□□□□ -0.27
TUBE1-202ENST00000368662 HACE1Q8IYU2 909 aa13.34□□□□□ -0.27
TUBE1-202ENST00000368662 CEP120Q8N960 986 aa13.34□□□□□ -0.27
TUBE1-202ENST00000368662 CGRRF1Q99675 332 aa13.34□□□□□ -0.27
TUBE1-202ENST00000368662 AGO3Q9H9G7 860 aaKnown RBP13.34□□□□□ -0.27
TUBE1-202ENST00000368662 PLEKHA5Q9HAU0 1116 aa13.34□□□□□ -0.27
TUBE1-202ENST00000368662 TOPORSQ9NS56 1045 aaPredicted RBP13.34□□□□□ -0.27
TUBE1-202ENST00000368662 SIK3Q9Y2K2 1263 aa13.34□□□□□ -0.27
TUBE1-202ENST00000368662 GCLMP48507 274 aa13.34□□□□□ -0.27
TUBE1-202ENST00000368662 RAB27AP51159 221 aa13.34□□□□□ -0.27
TUBE1-202ENST00000368662 PPP3CAQ08209 521 aa13.34□□□□□ -0.27
TUBE1-202ENST00000368662 FAAP100Q0VG06 881 aa13.34□□□□□ -0.27
TUBE1-202ENST00000368662 CBWD6Q4V339 395 aa13.34□□□□□ -0.27
TUBE1-202ENST00000368662 CBWD3Q5JTY5 395 aa13.34□□□□□ -0.27
TUBE1-202ENST00000368662 CBWD5Q5RIA9 395 aa13.34□□□□□ -0.27
TUBE1-202ENST00000368662 NT5DC4Q86YG4 428 aa13.34□□□□□ -0.27
TUBE1-202ENST00000368662 FTHL17Q9BXU8 183 aa13.34□□□□□ -0.27
TUBE1-202ENST00000368662 EIF2AQ9BY44 585 aaKnown RBP13.34□□□□□ -0.27
TUBE1-202ENST00000368662 TMEM117Q9H0C3 514 aa13.34□□□□□ -0.27
TUBE1-202ENST00000368662 MMRN2Q9H8L6 949 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms