RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 LARP4BQ92615 738 aaKnown RBP20.82■□□□□ 0.92
CKS1B-203ENST00000368439 CDT1Q9H211 546 aa20.82■□□□□ 0.92
CKS1B-203ENST00000368439 KCNG1Q9UIX4 513 aa20.82■□□□□ 0.92
CKS1B-203ENST00000368439 CITO14578 2027 aa20.82■□□□□ 0.92
CKS1B-203ENST00000368439 BRD1O95696 1058 aa20.81■□□□□ 0.92
CKS1B-203ENST00000368439 TAS1R1Q7RTX1 841 aa20.81■□□□□ 0.92
CKS1B-203ENST00000368439 CEP120Q8N960 986 aa20.81■□□□□ 0.92
CKS1B-203ENST00000368439 FIZ1Q96SL8 496 aa20.81■□□□□ 0.92
CKS1B-203ENST00000368439 PAAF1Q9BRP4 392 aa20.81■□□□□ 0.92
CKS1B-203ENST00000368439 HERC2P3Q9BVR0 1158 aa20.81■□□□□ 0.92
CKS1B-203ENST00000368439 LARSQ9P2J5 1176 aaKnown RBP20.81■□□□□ 0.92
CKS1B-203ENST00000368439 CACNG4Q9UBN1 327 aa20.81■□□□□ 0.92
CKS1B-203ENST00000368439 STK39Q9UEW8 545 aa20.81■□□□□ 0.92
CKS1B-203ENST00000368439 GDAQ9Y2T3 454 aa20.81■□□□□ 0.92
CKS1B-203ENST00000368439 PDCD11Q14690 1871 aaKnown RBP20.8■□□□□ 0.92
CKS1B-203ENST00000368439 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.8■□□□□ 0.92
CKS1B-203ENST00000368439 SOD2P04179 222 aa20.8■□□□□ 0.92
CKS1B-203ENST00000368439 GRM5P41594 1212 aa20.8■□□□□ 0.92
CKS1B-203ENST00000368439 SMTNP53814 917 aa20.8■□□□□ 0.92
CKS1B-203ENST00000368439 TUSC3Q13454 348 aa20.8■□□□□ 0.92
CKS1B-203ENST00000368439 PKP1Q13835 747 aa20.8■□□□□ 0.92
CKS1B-203ENST00000368439 ANKRD54Q6NXT1 300 aa20.8■□□□□ 0.92
CKS1B-203ENST00000368439 SYCE2Q6PIF2 218 aa20.8■□□□□ 0.92
CKS1B-203ENST00000368439 KRI1Q8N9T8 703 aaKnown RBP20.8■□□□□ 0.92
CKS1B-203ENST00000368439 RASSF8Q8NHQ8 419 aa20.8■□□□□ 0.92
CKS1B-203ENST00000368439 RPS6KC1Q96S38 1066 aa20.8■□□□□ 0.92
CKS1B-203ENST00000368439 S1PR5Q9H228 398 aa20.8■□□□□ 0.92
CKS1B-203ENST00000368439 PRKAG3Q9UGI9 489 aa20.8■□□□□ 0.92
CKS1B-203ENST00000368439 FAM50BQ9Y247 325 aa20.8■□□□□ 0.92
CKS1B-203ENST00000368439 HCFC2Q9Y5Z7 792 aa20.8■□□□□ 0.92
CKS1B-203ENST00000368439 A0A087X0B3 334 aa20.79■□□□□ 0.92
CKS1B-203ENST00000368439 C19orf67A6NJJ6 358 aa20.79■□□□□ 0.92
CKS1B-203ENST00000368439 ZSCAN22P10073 491 aaPredicted RBP20.79■□□□□ 0.92
CKS1B-203ENST00000368439 PDIA4P13667 645 aaKnown RBP20.79■□□□□ 0.92
CKS1B-203ENST00000368439 ZP2Q05996 745 aa20.79■□□□□ 0.92
CKS1B-203ENST00000368439 BMS1Q14692 1282 aaKnown RBP20.79■□□□□ 0.92
CKS1B-203ENST00000368439 ZNF568Q3ZCX4 644 aa20.79■□□□□ 0.92
CKS1B-203ENST00000368439 XKR4Q5GH76 650 aa20.79■□□□□ 0.92
CKS1B-203ENST00000368439 LLGL2Q6P1M3 1020 aa20.79■□□□□ 0.92
CKS1B-203ENST00000368439 ALKAL1Q6UXT8 129 aa20.79■□□□□ 0.92
CKS1B-203ENST00000368439 SLC22A17Q8WUG5 538 aa20.79■□□□□ 0.92
CKS1B-203ENST00000368439 RABGGTAQ92696 567 aa20.79■□□□□ 0.92
CKS1B-203ENST00000368439 KHSRPQ92945 711 aaKnown RBP eCLIP20.79■□□□□ 0.92
CKS1B-203ENST00000368439 ZBTB45Q96K62 511 aaPredicted RBP20.79■□□□□ 0.92
CKS1B-203ENST00000368439 COLEC11Q9BWP8 271 aa20.79■□□□□ 0.92
CKS1B-203ENST00000368439 TFIP11Q9UBB9 837 aaKnown RBP20.79■□□□□ 0.92
CKS1B-203ENST00000368439 STK17AQ9UEE5 414 aa20.79■□□□□ 0.92
CKS1B-203ENST00000368439 CCDC39Q9UFE4 941 aa20.79■□□□□ 0.92
CKS1B-203ENST00000368439 PLXNA3P51805 1871 aa20.78■□□□□ 0.92
CKS1B-203ENST00000368439 MEFVO15553 781 aaPredicted RBP20.78■□□□□ 0.92
CKS1B-203ENST00000368439 F13A1P00488 732 aa20.78■□□□□ 0.92
CKS1B-203ENST00000368439 THP07101 528 aa20.78■□□□□ 0.92
CKS1B-203ENST00000368439 HSP90AA1P07900 732 aaKnown RBP20.78■□□□□ 0.92
CKS1B-203ENST00000368439 MCF2P10911 925 aa20.78■□□□□ 0.92
CKS1B-203ENST00000368439 FOXD4L5Q5VV16 416 aaPredicted RBP20.78■□□□□ 0.92
CKS1B-203ENST00000368439 KIAA0319Q5VV43 1072 aa20.78■□□□□ 0.92
CKS1B-203ENST00000368439 MPZL3Q6UWV2 235 aa20.78■□□□□ 0.92
CKS1B-203ENST00000368439 ZPBP2Q6X784 338 aa20.78■□□□□ 0.92
CKS1B-203ENST00000368439 HAUS6Q7Z4H7 955 aa20.78■□□□□ 0.92
CKS1B-203ENST00000368439 APBB1IPQ7Z5R6 666 aaPredicted RBP20.78■□□□□ 0.92
CKS1B-203ENST00000368439 ZBTB33Q86T24 672 aa20.78■□□□□ 0.92
CKS1B-203ENST00000368439 ADHFE1Q8IWW8 467 aa20.78■□□□□ 0.92
CKS1B-203ENST00000368439 GJD3Q8N144 294 aa20.78■□□□□ 0.92
CKS1B-203ENST00000368439 SPRYD3Q8NCJ5 442 aa20.78■□□□□ 0.92
CKS1B-203ENST00000368439 FOXD4L4Q8WXT5 416 aaPredicted RBP20.78■□□□□ 0.92
CKS1B-203ENST00000368439 SUSD6Q92537 303 aa20.78■□□□□ 0.92
CKS1B-203ENST00000368439 CASP10Q92851 521 aa20.78■□□□□ 0.92
CKS1B-203ENST00000368439 KLHL5Q96PQ7 755 aa20.78■□□□□ 0.92
CKS1B-203ENST00000368439 PPP1R10Q96QC0 940 aaKnown RBP20.78■□□□□ 0.92
CKS1B-203ENST00000368439 GPR62Q9BZJ7 368 aa20.78■□□□□ 0.92
CKS1B-203ENST00000368439 PARVGQ9HBI0 331 aa20.78■□□□□ 0.92
CKS1B-203ENST00000368439 CHST7Q9NS84 486 aa20.78■□□□□ 0.92
CKS1B-203ENST00000368439 USP15Q9Y4E8 981 aaPredicted RBP20.78■□□□□ 0.92
CKS1B-203ENST00000368439 VWA8A3KMH1 1905 aa20.77■□□□□ 0.92
CKS1B-203ENST00000368439 CASTOR2A6NHX0 329 aa20.77■□□□□ 0.92
CKS1B-203ENST00000368439 PPP6R2O75170 966 aa20.77■□□□□ 0.92
CKS1B-203ENST00000368439 NR1I2O75469 434 aa20.77■□□□□ 0.92
CKS1B-203ENST00000368439 TOM1L1O75674 476 aa20.77■□□□□ 0.92
CKS1B-203ENST00000368439 CNPP09543 421 aaKnown RBP20.77■□□□□ 0.92
CKS1B-203ENST00000368439 CA8P35219 290 aa20.77■□□□□ 0.92
CKS1B-203ENST00000368439 STRN3Q13033 797 aa20.77■□□□□ 0.92
CKS1B-203ENST00000368439 STK38Q15208 465 aa20.77■□□□□ 0.92
CKS1B-203ENST00000368439 MYCT1Q8N699 235 aa20.77■□□□□ 0.92
CKS1B-203ENST00000368439 ZNF396Q96N95 335 aaPredicted RBP20.77■□□□□ 0.92
CKS1B-203ENST00000368439 HAPLN2Q9GZV7 340 aa20.77■□□□□ 0.92
CKS1B-203ENST00000368439 ADAM28Q9UKQ2 775 aa20.77■□□□□ 0.92
CKS1B-203ENST00000368439 H0YCG3 227 aa20.76■□□□□ 0.91
CKS1B-203ENST00000368439 SPTLC2O15270 562 aa20.76■□□□□ 0.91
CKS1B-203ENST00000368439 TRAK2O60296 914 aa20.76■□□□□ 0.91
CKS1B-203ENST00000368439 FAM13AO94988 1023 aa20.76■□□□□ 0.91
CKS1B-203ENST00000368439 YEATS4O95619 227 aa20.76■□□□□ 0.91
CKS1B-203ENST00000368439 SRGAP2BP0DMP2 458 aa20.76■□□□□ 0.91
CKS1B-203ENST00000368439 EPCAMP16422 314 aa20.76■□□□□ 0.91
CKS1B-203ENST00000368439 OSTNP61366 133 aa20.76■□□□□ 0.91
CKS1B-203ENST00000368439 DSG1Q02413 1049 aa20.76■□□□□ 0.91
CKS1B-203ENST00000368439 HSP90AA2PQ14568 343 aaPredicted RBP20.76■□□□□ 0.91
CKS1B-203ENST00000368439 GLRA4Q5JXX5 417 aa20.76■□□□□ 0.91
CKS1B-203ENST00000368439 RRAGBQ5VZM2 374 aa20.76■□□□□ 0.91
CKS1B-203ENST00000368439 FUT10Q6P4F1 479 aa20.76■□□□□ 0.91
CKS1B-203ENST00000368439 MRPL17Q9NRX2 175 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms