RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 JDP2Q8WYK2 163 aa19.43■□□□□ 0.7
UBQLN4-201ENST00000368309 BICD1Q96G01 975 aa19.43■□□□□ 0.7
UBQLN4-201ENST00000368309 MAP3K20Q9NYL2 800 aaKnown RBP19.43■□□□□ 0.7
UBQLN4-201ENST00000368309 TLDC2A0PJX2 215 aa19.43■□□□□ 0.7
UBQLN4-201ENST00000368309 SMIM23A6NLE4 172 aa19.43■□□□□ 0.7
UBQLN4-201ENST00000368309 RPL21P46778 160 aaKnown RBP19.43■□□□□ 0.7
UBQLN4-201ENST00000368309 PPM1EQ8WY54 764 aa19.43■□□□□ 0.7
UBQLN4-201ENST00000368309 TXLNGYQ9BZA5 131 aa19.43■□□□□ 0.7
UBQLN4-201ENST00000368309 SLC12A6Q9UHW9 1150 aa19.43■□□□□ 0.7
UBQLN4-201ENST00000368309 A0A087WUV0 522 aaPredicted RBP19.43■□□□□ 0.7
UBQLN4-201ENST00000368309 GPC3P51654 580 aa19.43■□□□□ 0.7
UBQLN4-201ENST00000368309 CDR2Q01850 454 aa19.43■□□□□ 0.7
UBQLN4-201ENST00000368309 TADA2BQ86TJ2 420 aa19.43■□□□□ 0.7
UBQLN4-201ENST00000368309 CCDC105Q8IYK2 499 aa19.43■□□□□ 0.7
UBQLN4-201ENST00000368309 CD101Q93033 1021 aa19.43■□□□□ 0.7
UBQLN4-201ENST00000368309 PMM2O15305 246 aa19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 CAND2O75155 1236 aa19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 CHRNA3P32297 505 aa19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 PMS2P54278 862 aa19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 PPP2R2AP63151 447 aa19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 CYP24A1Q07973 514 aa19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 SNRNP48Q6IEG0 339 aaKnown RBP19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 B4GALNT4Q76KP1 1039 aa19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 OTUD6AQ7L8S5 288 aa19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 TRIM7Q9C029 511 aa19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 WNT8AQ9H1J5 351 aa19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 EPB41L4BQ9H329 900 aa19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 RASAL2Q9UJF2 1139 aa19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 COQ4Q9Y3A0 265 aa19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 RGS20O76081 388 aa19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 MDM1Q8TC05 714 aa19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 GRHL1Q9NZI5 618 aa19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 CYP1A2P05177 515 aa19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 RARAP10276 462 aa19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 CTNNA2P26232 953 aa19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 TCEAL1Q15170 157 aa19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 DDX1Q92499 740 aaKnown RBP19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 RNF25Q96BH1 459 aaPredicted RBP19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 MFSD14AQ96MC6 490 aa19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 SEPT9Q9UHD8 586 aaPredicted RBP19.42■□□□□ 0.7
UBQLN4-201ENST00000368309 GRIN3BO60391 1043 aa19.41■□□□□ 0.7
UBQLN4-201ENST00000368309 CCND2P30279 289 aa19.41■□□□□ 0.7
UBQLN4-201ENST00000368309 TNFAIP1Q13829 316 aa19.41■□□□□ 0.7
UBQLN4-201ENST00000368309 CYFIP1Q7L576 1253 aa19.41■□□□□ 0.7
UBQLN4-201ENST00000368309 SLC13A5Q86YT5 568 aaPredicted RBP19.41■□□□□ 0.7
UBQLN4-201ENST00000368309 SEMA4AQ9H3S1 761 aa19.41■□□□□ 0.7
UBQLN4-201ENST00000368309 SLC29A2Q14542 456 aa19.41■□□□□ 0.7
UBQLN4-201ENST00000368309 AGBL2Q5U5Z8 902 aa19.41■□□□□ 0.7
UBQLN4-201ENST00000368309 LLGL2Q6P1M3 1020 aa19.41■□□□□ 0.7
UBQLN4-201ENST00000368309 SLC17A8Q8NDX2 589 aa19.41■□□□□ 0.7
UBQLN4-201ENST00000368309 KIFAP3Q92845 792 aa19.41■□□□□ 0.7
UBQLN4-201ENST00000368309 NTPCRQ9BSD7 190 aaKnown RBP19.41■□□□□ 0.7
UBQLN4-201ENST00000368309 GTF3C4Q9UKN8 822 aa19.41■□□□□ 0.7
UBQLN4-201ENST00000368309 PCDHA3Q9Y5H8 950 aa19.41■□□□□ 0.7
UBQLN4-201ENST00000368309 CCDC60Q8IWA6 550 aaPredicted RBP19.41■□□□□ 0.7
UBQLN4-201ENST00000368309 PABPC3Q9H361 631 aaKnown RBP19.41■□□□□ 0.7
UBQLN4-201ENST00000368309 XPNPEP1Q9NQW7 623 aa19.41■□□□□ 0.7
UBQLN4-201ENST00000368309 PSME4Q14997 1843 aa19.4■□□□□ 0.7
UBQLN4-201ENST00000368309 CLDN3O15551 220 aa19.4■□□□□ 0.7
UBQLN4-201ENST00000368309 STBD1O95210 358 aa19.4■□□□□ 0.7
UBQLN4-201ENST00000368309 FAM107AO95990 144 aa19.4■□□□□ 0.7
UBQLN4-201ENST00000368309 CLUL1Q15846 466 aa19.4■□□□□ 0.7
UBQLN4-201ENST00000368309 CPA5Q8WXQ8 436 aa19.4■□□□□ 0.7
UBQLN4-201ENST00000368309 ZNF516Q92618 1163 aa19.4■□□□□ 0.7
UBQLN4-201ENST00000368309 PCYOX1Q9UHG3 505 aa19.4■□□□□ 0.7
UBQLN4-201ENST00000368309 MTA2O94776 668 aa19.4■□□□□ 0.7
UBQLN4-201ENST00000368309 HMGCS2P54868 508 aa19.4■□□□□ 0.7
UBQLN4-201ENST00000368309 TTC31Q49AM3 519 aaPredicted RBP19.4■□□□□ 0.7
UBQLN4-201ENST00000368309 ACAD10Q6JQN1 1059 aa19.4■□□□□ 0.7
UBQLN4-201ENST00000368309 GPD1LQ8N335 351 aa19.4■□□□□ 0.7
UBQLN4-201ENST00000368309 FBXL18Q96ME1 805 aa19.4■□□□□ 0.7
UBQLN4-201ENST00000368309 HACL1Q9UJ83 578 aa19.4■□□□□ 0.7
UBQLN4-201ENST00000368309 PNMA2Q9UL42 364 aa19.4■□□□□ 0.7
UBQLN4-201ENST00000368309 KCNA2P16389 499 aa19.39■□□□□ 0.7
UBQLN4-201ENST00000368309 SSTR3P32745 418 aaPredicted RBP19.39■□□□□ 0.7
UBQLN4-201ENST00000368309 COILP38432 576 aaPredicted RBP19.39■□□□□ 0.7
UBQLN4-201ENST00000368309 BACE1P56817 501 aa19.39■□□□□ 0.7
UBQLN4-201ENST00000368309 SNX1Q13596 522 aa19.39■□□□□ 0.7
UBQLN4-201ENST00000368309 TAS1R3Q7RTX0 852 aa19.39■□□□□ 0.7
UBQLN4-201ENST00000368309 TMC2Q8TDI7 906 aa19.39■□□□□ 0.7
UBQLN4-201ENST00000368309 C1orf54Q8WWF1 131 aa19.39■□□□□ 0.7
UBQLN4-201ENST00000368309 SPIRE2Q8WWL2 714 aa19.39■□□□□ 0.7
UBQLN4-201ENST00000368309 ATP6V0A1Q93050 837 aa19.39■□□□□ 0.7
UBQLN4-201ENST00000368309 GMNCA6NCL1 334 aa19.39■□□□□ 0.69
UBQLN4-201ENST00000368309 HSPA6P17066 643 aa19.39■□□□□ 0.69
UBQLN4-201ENST00000368309 DRG2P55039 364 aaKnown RBP19.39■□□□□ 0.69
UBQLN4-201ENST00000368309 RWDD2BP57060 319 aa19.39■□□□□ 0.69
UBQLN4-201ENST00000368309 SLC20A2Q08357 652 aa19.39■□□□□ 0.69
UBQLN4-201ENST00000368309 MTERF2Q49AM1 385 aa19.39■□□□□ 0.69
UBQLN4-201ENST00000368309 DAB2IPQ5VWQ8 1189 aa19.39■□□□□ 0.69
UBQLN4-201ENST00000368309 DENND2CQ68D51 928 aa19.39■□□□□ 0.69
UBQLN4-201ENST00000368309 CHADLQ6NUI6 762 aa19.39■□□□□ 0.69
UBQLN4-201ENST00000368309 ANAPC7Q9UJX3 599 aa19.39■□□□□ 0.69
UBQLN4-201ENST00000368309 MTUS1Q9ULD2 1270 aa19.39■□□□□ 0.69
UBQLN4-201ENST00000368309 FGFR4P22455 802 aa19.39■□□□□ 0.69
UBQLN4-201ENST00000368309 ACOT2P49753 483 aa19.39■□□□□ 0.69
UBQLN4-201ENST00000368309 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.39■□□□□ 0.69
UBQLN4-201ENST00000368309 LOXHD1Q8IVV2 1947 aa19.39■□□□□ 0.69
UBQLN4-201ENST00000368309 WNT7BP56706 349 aa19.38■□□□□ 0.69
UBQLN4-201ENST00000368309 PRKCEQ02156 737 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms