RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 FBXL13Q8NEE6 735 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 AGBL3Q8NEM8 1001 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 SEMA4DQ92854 862 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 SENP7Q9BQF6 1050 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 NTPCRQ9BSD7 190 aaKnown RBP15.34■□□□□ 0.05
CD48-201ENST00000368045 KIAA1683Q9H0B3 1180 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 LRRC19Q9H756 370 aa15.34■□□□□ 0.05
CD48-201ENST00000368045 DCDC2CA8MYV0 355 aa15.33■□□□□ 0.04
CD48-201ENST00000368045 H0YHG0 523 aa15.33■□□□□ 0.04
CD48-201ENST00000368045 FSCN2O14926 492 aa15.33■□□□□ 0.04
CD48-201ENST00000368045 RGS16O15492 202 aaPredicted RBP15.33■□□□□ 0.04
CD48-201ENST00000368045 C21orf2O43822 256 aa15.33■□□□□ 0.04
CD48-201ENST00000368045 DKC1O60832 514 aaKnown RBP eCLIP15.33■□□□□ 0.04
CD48-201ENST00000368045 RAD17O75943 681 aa15.33■□□□□ 0.04
CD48-201ENST00000368045 MMEP08473 750 aa15.33■□□□□ 0.04
CD48-201ENST00000368045 FDX1P10109 184 aa15.33■□□□□ 0.04
CD48-201ENST00000368045 DRD4P21917 467 aa15.33■□□□□ 0.04
CD48-201ENST00000368045 ADSSP30520 456 aa15.33■□□□□ 0.04
CD48-201ENST00000368045 MAN1A1P33908 653 aa15.33■□□□□ 0.04
CD48-201ENST00000368045 NPTX2P47972 431 aa15.33■□□□□ 0.04
CD48-201ENST00000368045 PGM5Q15124 567 aa15.33■□□□□ 0.04
CD48-201ENST00000368045 SIX1Q15475 284 aaPredicted RBP15.33■□□□□ 0.04
CD48-201ENST00000368045 UGCGQ16739 394 aa15.33■□□□□ 0.04
CD48-201ENST00000368045 XKR9Q5GH70 373 aa15.33■□□□□ 0.04
CD48-201ENST00000368045 FAM102BQ5T8I3 360 aa15.33■□□□□ 0.04
CD48-201ENST00000368045 AADACL2Q6P093 401 aa15.33■□□□□ 0.04
CD48-201ENST00000368045 TRMT10CQ7L0Y3 403 aaKnown RBP15.33■□□□□ 0.04
CD48-201ENST00000368045 MIGA2Q7L4E1 593 aa15.33■□□□□ 0.04
CD48-201ENST00000368045 SLC47A2Q86VL8 602 aa15.33■□□□□ 0.04
CD48-201ENST00000368045 CCDC105Q8IYK2 499 aa15.33■□□□□ 0.04
CD48-201ENST00000368045 TRIM11Q96F44 468 aa15.33■□□□□ 0.04
CD48-201ENST00000368045 CHMP6Q96FZ7 201 aa15.33■□□□□ 0.04
CD48-201ENST00000368045 SEC16BQ96JE7 1060 aa15.33■□□□□ 0.04
CD48-201ENST00000368045 ROPN1BQ9BZX4 212 aaPredicted RBP15.33■□□□□ 0.04
CD48-201ENST00000368045 ROPN1Q9HAT0 212 aaPredicted RBP15.33■□□□□ 0.04
CD48-201ENST00000368045 AVENQ9NQS1 362 aaPredicted RBP15.33■□□□□ 0.04
CD48-201ENST00000368045 RAB20Q9NX57 234 aa15.33■□□□□ 0.04
CD48-201ENST00000368045 GOLGA8IPA6NC78 632 aa15.32■□□□□ 0.04
CD48-201ENST00000368045 GOLGA8JA6NMD2 632 aa15.32■□□□□ 0.04
CD48-201ENST00000368045 ANKRD63C9JTQ0 380 aa15.32■□□□□ 0.04
CD48-201ENST00000368045 ECEL1O95672 775 aa15.32■□□□□ 0.04
CD48-201ENST00000368045 SHBGP04278 402 aa15.32■□□□□ 0.04
CD48-201ENST00000368045 MYBL1P10243 752 aa15.32■□□□□ 0.04
CD48-201ENST00000368045 CNGA1P29973 690 aa15.32■□□□□ 0.04
CD48-201ENST00000368045 HNRNPH1P31943 449 aaKnown RBP15.32■□□□□ 0.04
CD48-201ENST00000368045 GCNT1Q02742 428 aa15.32■□□□□ 0.04
CD48-201ENST00000368045 CYP24A1Q07973 514 aa15.32■□□□□ 0.04
CD48-201ENST00000368045 CLEC16AQ2KHT3 1053 aa15.32■□□□□ 0.04
CD48-201ENST00000368045 LACTB2Q53H82 288 aaPredicted RBP15.32■□□□□ 0.04
CD48-201ENST00000368045 MFSD5Q6N075 450 aa15.32■□□□□ 0.04
CD48-201ENST00000368045 OTUD6AQ7L8S5 288 aa15.32■□□□□ 0.04
CD48-201ENST00000368045 ZNF677Q86XU0 584 aa15.32■□□□□ 0.04
CD48-201ENST00000368045 ZDHHC14Q8IZN3 488 aa15.32■□□□□ 0.04
CD48-201ENST00000368045 LARGE2Q8N3Y3 721 aa15.32■□□□□ 0.04
CD48-201ENST00000368045 ZSWIM2Q8NEG5 633 aa15.32■□□□□ 0.04
CD48-201ENST00000368045 DDX1Q92499 740 aaKnown RBP15.32■□□□□ 0.04
CD48-201ENST00000368045 DHX38Q92620 1227 aaKnown RBP15.32■□□□□ 0.04
CD48-201ENST00000368045 ZBED3Q96IU2 234 aaPredicted RBP15.32■□□□□ 0.04
CD48-201ENST00000368045 CABS1Q96KC9 395 aa15.32■□□□□ 0.04
CD48-201ENST00000368045 CCDC134Q9H6E4 229 aa15.32■□□□□ 0.04
CD48-201ENST00000368045 WHRNQ9P202 907 aa15.32■□□□□ 0.04
CD48-201ENST00000368045 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.32■□□□□ 0.04
CD48-201ENST00000368045 GOLGA6L7A0A1B0GV03 622 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 H0YCG3 227 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 RIPK2O43353 540 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 RARAP10276 462 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 EIF2AK2P19525 551 aaKnown RBP15.31■□□□□ 0.04
CD48-201ENST00000368045 GARTP22102 1010 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 RTP1P59025 263 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 CALCOCO2Q13137 446 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 SLC29A2Q14542 456 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 RNF207Q6ZRF8 634 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 CPLX4Q7Z7G2 160 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 CDAN1Q8IWY9 1227 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 PSPC1Q8WXF1 523 aaKnown RBP15.31■□□□□ 0.04
CD48-201ENST00000368045 TAAR1Q96RJ0 339 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 CEP89Q96ST8 783 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 PDCD2LQ9BRP1 358 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 GPRC5CQ9NQ84 441 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 KMT5AQ9NQR1 393 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 BCS1LQ9Y276 419 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 DENND3A2RUS2 1198 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 PHF20L1A8MW92 1017 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 ATMINO43313 823 aaPredicted RBP15.31■□□□□ 0.04
CD48-201ENST00000368045 CCNE2O96020 404 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 SLC1A1P43005 524 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 TNFAIP8L3Q5GJ75 292 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 FBXW10Q5XX13 1052 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 GPRASP2Q96D09 838 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 SAAL1Q96ER3 474 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 MOV10L1Q9BXT6 1211 aaKnown RBP15.31■□□□□ 0.04
CD48-201ENST00000368045 KIAA1586Q9HCI6 787 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 RAVER2Q9HCJ3 691 aaKnown RBP15.31■□□□□ 0.04
CD48-201ENST00000368045 PXMP2Q9NR77 195 aa15.31■□□□□ 0.04
CD48-201ENST00000368045 MAFGO15525 162 aa15.3■□□□□ 0.04
CD48-201ENST00000368045 ASAP2O43150 1006 aa15.3■□□□□ 0.04
CD48-201ENST00000368045 GRIN3BO60391 1043 aa15.3■□□□□ 0.04
CD48-201ENST00000368045 CTNND1O60716 968 aaKnown RBP15.3■□□□□ 0.04
CD48-201ENST00000368045 ZBED4O75132 1171 aa15.3■□□□□ 0.04
CD48-201ENST00000368045 GHRP10912 638 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms