RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 DYNC1LI2O43237 492 aaPredicted RBP12.45□□□□□ -0.42
USF1-201ENST00000368019 TRAPPC3O43617 180 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 RASSF9O75901 435 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 ICAM1P05362 532 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 ACRP10323 421 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 ECHS1P30084 290 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 GBP1P32455 592 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 CYP2C18P33260 490 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 PBX2P40425 430 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 TXKP42681 527 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 CLK2P49760 499 aaKnown RBP12.45□□□□□ -0.42
USF1-201ENST00000368019 MNAT1P51948 309 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 IKQ13123 557 aaPredicted RBP12.45□□□□□ -0.42
USF1-201ENST00000368019 ITGA7Q13683 1181 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 FSCN1Q16658 493 aaKnown RBP12.45□□□□□ -0.42
USF1-201ENST00000368019 KIAA0753Q2KHM9 967 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 CEP85LQ5SZL2 805 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 CCDC174Q6PII3 467 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 MAATS1Q7Z4T9 603 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 VPS36Q86VN1 386 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 SH2D3CQ8N5H7 860 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 LRRC57Q8N9N7 239 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 HERVK_113Q902F9 699 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 TBC1D5Q92609 795 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 VWCEQ96DN2 955 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 MS4A14Q96JA4 679 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 SEZ6LQ9BYH1 1024 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 PPP1R12CQ9BZL4 782 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 RANBP17Q9H2T7 1088 aaKnown RBP12.45□□□□□ -0.42
USF1-201ENST00000368019 KCTD10Q9H3F6 313 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 METTL14Q9HCE5 456 aaKnown RBP12.45□□□□□ -0.42
USF1-201ENST00000368019 IL23AQ9NPF7 189 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 PANK4Q9NVE7 773 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 TRAF3IP3Q9Y228 551 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 PCDHA2Q9Y5H9 948 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 UMODL1Q5DID0 1318 aa12.44□□□□□ -0.42
USF1-201ENST00000368019 SCN5AQ14524 2016 aa12.44□□□□□ -0.42
USF1-201ENST00000368019 A0A087X0T9 212 aa12.44□□□□□ -0.42
USF1-201ENST00000368019 ANKRD65E5RJM6 399 aa12.44□□□□□ -0.42
USF1-201ENST00000368019 CETN3O15182 167 aa12.44□□□□□ -0.42
USF1-201ENST00000368019 NKRFO15226 690 aaKnown RBP eCLIP12.44□□□□□ -0.42
USF1-201ENST00000368019 FAM228BP0C875 321 aa12.44□□□□□ -0.42
USF1-201ENST00000368019 HSD17B3P37058 310 aa12.44□□□□□ -0.42
USF1-201ENST00000368019 ATP1A2P50993 1020 aa12.44□□□□□ -0.42
USF1-201ENST00000368019 POLR2FP61218 127 aaKnown RBP12.44□□□□□ -0.42
USF1-201ENST00000368019 PPP2R2AP63151 447 aa12.44□□□□□ -0.42
USF1-201ENST00000368019 RAPGEF1Q13905 1077 aa12.44□□□□□ -0.42
USF1-201ENST00000368019 NFIL3Q16649 462 aa12.44□□□□□ -0.42
USF1-201ENST00000368019 TTBK2Q6IQ55 1244 aa12.44□□□□□ -0.42
USF1-201ENST00000368019 PSRC1Q6PGN9 363 aaPredicted RBP12.44□□□□□ -0.42
USF1-201ENST00000368019 TEX2Q8IWB9 1127 aa12.44□□□□□ -0.42
USF1-201ENST00000368019 FBXO16Q8IX29 292 aaPredicted RBP12.44□□□□□ -0.42
USF1-201ENST00000368019 DCAF4Q8WV16 495 aa12.44□□□□□ -0.42
USF1-201ENST00000368019 CYFIP2Q96F07 1278 aa12.44□□□□□ -0.42
USF1-201ENST00000368019 MBOAT7Q96N66 472 aa12.44□□□□□ -0.42
USF1-201ENST00000368019 FAM129AQ9BZQ8 928 aa12.44□□□□□ -0.42
USF1-201ENST00000368019 AP5M1Q9H0R1 490 aa12.44□□□□□ -0.42
USF1-201ENST00000368019 RAB17Q9H0T7 212 aa12.44□□□□□ -0.42
USF1-201ENST00000368019 VTA1Q9NP79 307 aa12.44□□□□□ -0.42
USF1-201ENST00000368019 EHD2Q9NZN4 543 aa12.44□□□□□ -0.42
USF1-201ENST00000368019 CXXC1Q9P0U4 656 aaPredicted RBP12.44□□□□□ -0.42
USF1-201ENST00000368019 CCPG1Q9ULG6 757 aa12.44□□□□□ -0.42
USF1-201ENST00000368019 SAMM50Q9Y512 469 aa12.44□□□□□ -0.42
USF1-201ENST00000368019 NCANO14594 1321 aa12.43□□□□□ -0.42
USF1-201ENST00000368019 LOC102724159A0A0B4J2E5 919 aa12.43□□□□□ -0.42
USF1-201ENST00000368019 SLC16A3O15427 465 aaKnown RBP12.43□□□□□ -0.42
USF1-201ENST00000368019 EDIL3O43854 480 aa12.43□□□□□ -0.42
USF1-201ENST00000368019 DNAJC8O75937 253 aaPredicted RBP12.43□□□□□ -0.42
USF1-201ENST00000368019 GSTA1P08263 222 aa12.43□□□□□ -0.42
USF1-201ENST00000368019 GUCY1A3Q02108 690 aa12.43□□□□□ -0.42
USF1-201ENST00000368019 ZNF844Q08AG5 666 aa12.43□□□□□ -0.42
USF1-201ENST00000368019 PWP2Q15269 919 aaKnown RBP12.43□□□□□ -0.42
USF1-201ENST00000368019 BMT2Q1RMZ1 405 aa12.43□□□□□ -0.42
USF1-201ENST00000368019 PREPLQ4J6C6 727 aaPredicted RBP12.43□□□□□ -0.42
USF1-201ENST00000368019 WLSQ5T9L3 541 aa12.43□□□□□ -0.42
USF1-201ENST00000368019 FBXW10Q5XX13 1052 aa12.43□□□□□ -0.42
USF1-201ENST00000368019 DPY19L2P1Q6NXN4 242 aa12.43□□□□□ -0.42
USF1-201ENST00000368019 NSMFQ6X4W1 530 aa12.43□□□□□ -0.42
USF1-201ENST00000368019 CCDC121Q6ZUS5 278 aa12.43□□□□□ -0.42
USF1-201ENST00000368019 EEPD1Q7L9B9 569 aa12.43□□□□□ -0.42
USF1-201ENST00000368019 DYMQ7RTS9 669 aa12.43□□□□□ -0.42
USF1-201ENST00000368019 HOOK3Q86VS8 718 aa12.43□□□□□ -0.42
USF1-201ENST00000368019 TPCN2Q8NHX9 752 aa12.43□□□□□ -0.42
USF1-201ENST00000368019 IFT81Q8WYA0 676 aa12.43□□□□□ -0.42
USF1-201ENST00000368019 PIGSQ96S52 555 aa12.43□□□□□ -0.42
USF1-201ENST00000368019 TRPV6Q9H1D0 765 aa12.43□□□□□ -0.42
USF1-201ENST00000368019 HIPK3Q9H422 1215 aa12.43□□□□□ -0.42
USF1-201ENST00000368019 NLRC4Q9NPP4 1024 aa12.43□□□□□ -0.42
USF1-201ENST00000368019 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.43□□□□□ -0.42
USF1-201ENST00000368019 SMARCAL1Q9NZC9 954 aa12.43□□□□□ -0.42
USF1-201ENST00000368019 BDP1A6H8Y1 2624 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 TRIP12Q14669 1992 aaPredicted RBP12.42□□□□□ -0.42
USF1-201ENST00000368019 PNMA6FA0A0J9YX94 578 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 RBM47A0AV96 593 aaKnown RBP12.42□□□□□ -0.42
USF1-201ENST00000368019 FAM187AA6NFU0 413 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 NFIBO00712 420 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 PDXKO00764 312 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 SLC37A4O43826 429 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 KIF1CO43896 1103 aaKnown RBP12.42□□□□□ -0.42
USF1-201ENST00000368019 B4GALT4O60513 344 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms