RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 MSH4O15457 936 aa17.52■□□□□ 0.39
SCAF8-201ENST00000367178 LCP1P13796 627 aa17.52■□□□□ 0.39
SCAF8-201ENST00000367178 TMPRSS15P98073 1019 aa17.52■□□□□ 0.39
SCAF8-201ENST00000367178 EXT2Q93063 718 aa17.52■□□□□ 0.39
SCAF8-201ENST00000367178 IFT43Q96FT9 208 aa17.52■□□□□ 0.39
SCAF8-201ENST00000367178 ERAP1Q9NZ08 941 aa17.52■□□□□ 0.39
SCAF8-201ENST00000367178 BFARQ9NZS9 450 aa17.52■□□□□ 0.39
SCAF8-201ENST00000367178 USH1CQ9Y6N9 552 aa17.52■□□□□ 0.39
SCAF8-201ENST00000367178 RIMS1Q86UR5 1692 aaKnown RBP17.52■□□□□ 0.39
SCAF8-201ENST00000367178 UBE2Q2LH0YL09 131 aa17.52■□□□□ 0.39
SCAF8-201ENST00000367178 SLC9A1P19634 815 aa17.52■□□□□ 0.39
SCAF8-201ENST00000367178 KIAA1755Q5JYT7 1200 aa17.52■□□□□ 0.39
SCAF8-201ENST00000367178 CEP120Q8N960 986 aa17.52■□□□□ 0.39
SCAF8-201ENST00000367178 SLC30A5Q8TAD4 765 aa17.52■□□□□ 0.39
SCAF8-201ENST00000367178 TRIM62Q9BVG3 475 aa17.52■□□□□ 0.39
SCAF8-201ENST00000367178 UVRAGQ9P2Y5 699 aa17.52■□□□□ 0.39
SCAF8-201ENST00000367178 IGSF9BQ9UPX0 1349 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 SLC37A4O43826 429 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 MMEP08473 750 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 SLC1A1P43005 524 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 PDCLQ13371 301 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 RBBP8NLQ8NC74 664 aaPredicted RBP17.51■□□□□ 0.39
SCAF8-201ENST00000367178 MIPOL1Q8TD10 442 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 GPRASP2Q96D09 838 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 PITPNM3Q9BZ71 974 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 ZFYVE28Q9HCC9 887 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 TXLNGQ9NUQ3 528 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 SNX12Q9UMY4 172 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 HBP1O60381 514 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 CHEK2O96017 543 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 NCF2P19878 526 aaPredicted RBP17.51■□□□□ 0.39
SCAF8-201ENST00000367178 CDK17Q00537 523 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 STILQ15468 1287 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 LRRC71Q8N4P6 559 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 PPM1NQ8N819 430 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 ENGASEQ8NFI3 743 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 GANCQ8TET4 914 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 SPON2Q9BUD6 331 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 EPS15L1Q9UBC2 864 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 TRAPPC3O43617 180 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 DMTNQ08495 405 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 AP1B1Q10567 949 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 RDM1Q8NG50 284 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 TUBB6Q9BUF5 446 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.51■□□□□ 0.39
SCAF8-201ENST00000367178 HSPA4LO95757 839 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 ZFXP17010 805 aaPredicted RBP17.51■□□□□ 0.39
SCAF8-201ENST00000367178 SNCBQ16143 134 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 IER5Q5VY09 327 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 ITPRIPL1Q6GPH6 555 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 WDR35Q9P2L0 1181 aa17.51■□□□□ 0.39
SCAF8-201ENST00000367178 TAC1P20366 129 aa17.5■□□□□ 0.39
SCAF8-201ENST00000367178 KCNJ6P48051 423 aa17.5■□□□□ 0.39
SCAF8-201ENST00000367178 E4F1Q66K89 784 aaPredicted RBP17.5■□□□□ 0.39
SCAF8-201ENST00000367178 CRLF3Q8IUI8 442 aa17.5■□□□□ 0.39
SCAF8-201ENST00000367178 SCG3Q8WXD2 468 aaKnown RBP17.5■□□□□ 0.39
SCAF8-201ENST00000367178 MAGEB5Q9BZ81 275 aa17.5■□□□□ 0.39
SCAF8-201ENST00000367178 AMACRQ9UHK6 382 aa17.5■□□□□ 0.39
SCAF8-201ENST00000367178 CCZ1BP86790 482 aa17.5■□□□□ 0.39
SCAF8-201ENST00000367178 CCZ1P86791 482 aaPredicted RBP17.5■□□□□ 0.39
SCAF8-201ENST00000367178 TMEM62Q0P6H9 643 aa17.5■□□□□ 0.39
SCAF8-201ENST00000367178 PDIA2Q13087 525 aaKnown RBP17.5■□□□□ 0.39
SCAF8-201ENST00000367178 DHX34Q14147 1143 aaKnown RBP17.5■□□□□ 0.39
SCAF8-201ENST00000367178 ATF7IP2Q5U623 682 aa17.5■□□□□ 0.39
SCAF8-201ENST00000367178 C1orf228Q6PIY5 440 aa17.5■□□□□ 0.39
SCAF8-201ENST00000367178 APPL2Q8NEU8 664 aa17.5■□□□□ 0.39
SCAF8-201ENST00000367178 SPDYE1Q8NFV5 336 aaPredicted RBP17.5■□□□□ 0.39
SCAF8-201ENST00000367178 VPS11Q9H270 941 aa17.5■□□□□ 0.39
SCAF8-201ENST00000367178 EPC1Q9H2F5 836 aa17.5■□□□□ 0.39
SCAF8-201ENST00000367178 ABCF3Q9NUQ8 709 aa17.5■□□□□ 0.39
SCAF8-201ENST00000367178 PRMT7Q9NVM4 692 aaPredicted RBP17.5■□□□□ 0.39
SCAF8-201ENST00000367178 ZC3H18Q86VM9 953 aaKnown RBP17.5■□□□□ 0.39
SCAF8-201ENST00000367178 WDR75Q8IWA0 830 aaKnown RBP17.5■□□□□ 0.39
SCAF8-201ENST00000367178 SYT2Q8N9I0 419 aaPredicted RBP17.5■□□□□ 0.39
SCAF8-201ENST00000367178 CPA5Q8WXQ8 436 aa17.5■□□□□ 0.39
SCAF8-201ENST00000367178 PPWD1Q96BP3 646 aaKnown RBP17.5■□□□□ 0.39
SCAF8-201ENST00000367178 SNF8Q96H20 258 aa17.5■□□□□ 0.39
SCAF8-201ENST00000367178 RRP15Q9Y3B9 282 aaKnown RBP17.5■□□□□ 0.39
SCAF8-201ENST00000367178 F5H423 210 aaPredicted RBP17.5■□□□□ 0.39
SCAF8-201ENST00000367178 CYP2C9P11712 490 aa17.5■□□□□ 0.39
SCAF8-201ENST00000367178 GGCXP38435 758 aa17.5■□□□□ 0.39
SCAF8-201ENST00000367178 VEPH1Q14D04 833 aa17.5■□□□□ 0.39
SCAF8-201ENST00000367178 PTPAQ15257 358 aa17.5■□□□□ 0.39
SCAF8-201ENST00000367178 IZUMO3Q5VZ72 239 aa17.5■□□□□ 0.39
SCAF8-201ENST00000367178 EFCAB12Q6NXP0 572 aa17.5■□□□□ 0.39
SCAF8-201ENST00000367178 ELAC2Q9BQ52 826 aaKnown RBP17.5■□□□□ 0.39
SCAF8-201ENST00000367178 PXDNQ92626 1479 aa17.49■□□□□ 0.39
SCAF8-201ENST00000367178 HLA-DRAP01903 254 aa17.49■□□□□ 0.39
SCAF8-201ENST00000367178 CYP11B2P19099 503 aa17.49■□□□□ 0.39
SCAF8-201ENST00000367178 NAA30Q147X3 362 aaPredicted RBP17.49■□□□□ 0.39
SCAF8-201ENST00000367178 HP1BP3Q5SSJ5 553 aaPredicted RBP17.49■□□□□ 0.39
SCAF8-201ENST00000367178 RASGRP2Q7LDG7 609 aa17.49■□□□□ 0.39
SCAF8-201ENST00000367178 ESRRAP11474 423 aaPredicted RBP17.49■□□□□ 0.39
SCAF8-201ENST00000367178 MAGOHP61326 146 aaKnown RBP17.49■□□□□ 0.39
SCAF8-201ENST00000367178 SEC23AQ15436 765 aa17.49■□□□□ 0.39
SCAF8-201ENST00000367178 ELOA2Q8IYF1 753 aaPredicted RBP17.49■□□□□ 0.39
SCAF8-201ENST00000367178 ZBED8Q8IZ13 594 aa17.49■□□□□ 0.39
SCAF8-201ENST00000367178 SLC35G2Q8TBE7 412 aa17.49■□□□□ 0.39
SCAF8-201ENST00000367178 GBP5Q96PP8 586 aa17.49■□□□□ 0.39
SCAF8-201ENST00000367178 TARS2Q9BW92 718 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms